RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 HTR6P50406 440 aa4.65□□□□□ -1.67
GTF3C3-207ENST00000451088 VCPP55072 806 aaKnown RBP4.65□□□□□ -1.67
GTF3C3-207ENST00000451088 CCL23P55773 120 aa4.65□□□□□ -1.67
GTF3C3-207ENST00000451088 ICA1Q05084 483 aa4.65□□□□□ -1.67
GTF3C3-207ENST00000451088 GABPAQ06546 454 aa4.65□□□□□ -1.67
GTF3C3-207ENST00000451088 PGM5Q15124 567 aa4.65□□□□□ -1.67
GTF3C3-207ENST00000451088 ANXA2RQ3ZCQ2 193 aa4.65□□□□□ -1.67
GTF3C3-207ENST00000451088 FAM209BQ5JX69 171 aa4.65□□□□□ -1.67
GTF3C3-207ENST00000451088 CCSAPQ6IQ19 270 aaPredicted RBP4.65□□□□□ -1.67
GTF3C3-207ENST00000451088 DHRS13Q6UX07 377 aa4.65□□□□□ -1.67
GTF3C3-207ENST00000451088 RASGRP3Q8IV61 690 aa4.65□□□□□ -1.67
GTF3C3-207ENST00000451088 ADGRF4Q8IZF3 695 aa4.65□□□□□ -1.67
GTF3C3-207ENST00000451088 KLHDC9Q8NEP7 349 aa4.65□□□□□ -1.67
GTF3C3-207ENST00000451088 NPIPB3Q92617 1050 aa4.65□□□□□ -1.67
GTF3C3-207ENST00000451088 EIF3CQ99613 913 aaKnown RBP4.65□□□□□ -1.67
GTF3C3-207ENST00000451088 NACAP1Q9BZK3 213 aa4.65□□□□□ -1.67
GTF3C3-207ENST00000451088 TRIM2Q9C040 744 aa4.65□□□□□ -1.67
GTF3C3-207ENST00000451088 SPATC1LQ9H0A9 340 aa4.65□□□□□ -1.67
GTF3C3-207ENST00000451088 DECR2Q9NUI1 292 aa4.65□□□□□ -1.67
GTF3C3-207ENST00000451088 NRBP1Q9UHY1 535 aa4.65□□□□□ -1.67
GTF3C3-207ENST00000451088 B3GNT3Q9Y2A9 372 aa4.65□□□□□ -1.67
GTF3C3-207ENST00000451088 UBE2J1Q9Y385 318 aaPredicted RBP4.65□□□□□ -1.67
GTF3C3-207ENST00000451088 MROH7Q68CQ1 1323 aa4.65□□□□□ -1.67
GTF3C3-207ENST00000451088 RASA4BC9J798 803 aa4.64□□□□□ -1.67
GTF3C3-207ENST00000451088 RASA4O43374 803 aa4.64□□□□□ -1.67
GTF3C3-207ENST00000451088 SMAD6O43541 496 aaKnown RBP4.64□□□□□ -1.67
GTF3C3-207ENST00000451088 MBD4O95243 580 aa4.64□□□□□ -1.67
GTF3C3-207ENST00000451088 ITGA5P08648 1049 aa4.64□□□□□ -1.67
GTF3C3-207ENST00000451088 SRGAP2BP0DMP2 458 aa4.64□□□□□ -1.67
GTF3C3-207ENST00000451088 INPP5JQ15735 1006 aaPredicted RBP4.64□□□□□ -1.67
GTF3C3-207ENST00000451088 P3H1Q32P28 736 aa4.64□□□□□ -1.67
GTF3C3-207ENST00000451088 KLHL22Q53GT1 634 aa4.64□□□□□ -1.67
GTF3C3-207ENST00000451088 DAB2IPQ5VWQ8 1189 aa4.64□□□□□ -1.67
GTF3C3-207ENST00000451088 LIPMQ5VYY2 423 aa4.64□□□□□ -1.67
GTF3C3-207ENST00000451088 RUSC1-AS1Q66K80 236 aa4.64□□□□□ -1.67
GTF3C3-207ENST00000451088 RFX8Q6ZV50 586 aa4.64□□□□□ -1.67
GTF3C3-207ENST00000451088 MEPCEQ7L2J0 689 aaKnown RBP4.64□□□□□ -1.67
GTF3C3-207ENST00000451088 PHOSPHO2Q8TCD6 241 aa4.64□□□□□ -1.67
GTF3C3-207ENST00000451088 ACER1Q8TDN7 264 aa4.64□□□□□ -1.67
GTF3C3-207ENST00000451088 SDR42E1Q8WUS8 393 aa4.64□□□□□ -1.67
GTF3C3-207ENST00000451088 SLC25A28Q96A46 364 aa4.64□□□□□ -1.67
GTF3C3-207ENST00000451088 GLT1D1Q96MS3 346 aa4.64□□□□□ -1.67
GTF3C3-207ENST00000451088 GPR78Q96P69 363 aa4.64□□□□□ -1.67
GTF3C3-207ENST00000451088 BOLA2Q9H3K6 86 aa4.64□□□□□ -1.67
GTF3C3-207ENST00000451088 HIPK3Q9H422 1215 aa4.64□□□□□ -1.67
GTF3C3-207ENST00000451088 VCPKMTQ9H867 229 aa4.64□□□□□ -1.67
GTF3C3-207ENST00000451088 HELLSQ9NRZ9 838 aa4.64□□□□□ -1.67
GTF3C3-207ENST00000451088 THSD1Q9NS62 852 aa4.64□□□□□ -1.67
GTF3C3-207ENST00000451088 TM7SF3Q9NS93 570 aa4.64□□□□□ -1.67
GTF3C3-207ENST00000451088 ECHDC1Q9NTX5 307 aa4.64□□□□□ -1.67
GTF3C3-207ENST00000451088 FBXO28Q9NVF7 368 aa4.64□□□□□ -1.67
GTF3C3-207ENST00000451088 SLC4A4Q9Y6R1 1079 aa4.64□□□□□ -1.67
GTF3C3-207ENST00000451088 MAST4O15021 2626 aa4.64□□□□□ -1.67
GTF3C3-207ENST00000451088 UMODL1Q5DID0 1318 aa4.64□□□□□ -1.67
GTF3C3-207ENST00000451088 MCM3APO60318 1980 aa4.64□□□□□ -1.67
GTF3C3-207ENST00000451088 TMEM272A0A1B0GTI8 110 aa4.63□□□□□ -1.67
GTF3C3-207ENST00000451088 J3KTA2 159 aa4.63□□□□□ -1.67
GTF3C3-207ENST00000451088 HNRNPDLO14979 420 aaKnown RBP4.63□□□□□ -1.67
GTF3C3-207ENST00000451088 PPP6R2O75170 966 aa4.63□□□□□ -1.67
GTF3C3-207ENST00000451088 GLP2RO95838 553 aa4.63□□□□□ -1.67
GTF3C3-207ENST00000451088 WNT1P04628 370 aa4.63□□□□□ -1.67
GTF3C3-207ENST00000451088 ASGR1P07306 291 aa4.63□□□□□ -1.67
GTF3C3-207ENST00000451088 TDO2P48775 406 aa4.63□□□□□ -1.67
GTF3C3-207ENST00000451088 CBFBQ13951 182 aa4.63□□□□□ -1.67
GTF3C3-207ENST00000451088 CSHL1Q14406 222 aa4.63□□□□□ -1.67
GTF3C3-207ENST00000451088 SHROOM1Q2M3G4 852 aaPredicted RBP4.63□□□□□ -1.67
GTF3C3-207ENST00000451088 SBK1Q52WX2 424 aa4.63□□□□□ -1.67
GTF3C3-207ENST00000451088 ASPHD1Q5U4P2 390 aa4.63□□□□□ -1.67
GTF3C3-207ENST00000451088 C12orf60Q5U649 245 aa4.63□□□□□ -1.67
GTF3C3-207ENST00000451088 IZUMO3Q5VZ72 239 aa4.63□□□□□ -1.67
GTF3C3-207ENST00000451088 ARL6IP4Q66PJ3 421 aaKnown RBP4.63□□□□□ -1.67
GTF3C3-207ENST00000451088 LVRNQ6Q4G3 990 aa4.63□□□□□ -1.67
GTF3C3-207ENST00000451088 TICAM2Q86XR7 235 aa4.63□□□□□ -1.67
GTF3C3-207ENST00000451088 HERC6Q8IVU3 1022 aa4.63□□□□□ -1.67
GTF3C3-207ENST00000451088 ZNF444Q8N0Y2 327 aaPredicted RBP4.63□□□□□ -1.67
GTF3C3-207ENST00000451088 OR2C3Q8N628 320 aa4.63□□□□□ -1.67
GTF3C3-207ENST00000451088 KBTBD3Q8NAB2 608 aa4.63□□□□□ -1.67
GTF3C3-207ENST00000451088 OR52N4Q8NGI2 321 aa4.63□□□□□ -1.67
GTF3C3-207ENST00000451088 IPO4Q8TEX9 1081 aaKnown RBP4.63□□□□□ -1.67
GTF3C3-207ENST00000451088 GDPD5Q8WTR4 605 aa4.63□□□□□ -1.67
GTF3C3-207ENST00000451088 WASF1Q92558 559 aa4.63□□□□□ -1.67
GTF3C3-207ENST00000451088 RIPOR3Q96MK2 946 aa4.63□□□□□ -1.67
GTF3C3-207ENST00000451088 MOV10L1Q9BXT6 1211 aaKnown RBP4.63□□□□□ -1.67
GTF3C3-207ENST00000451088 MLXIPQ9HAP2 919 aa4.63□□□□□ -1.67
GTF3C3-207ENST00000451088 IPO11Q9UI26 975 aaKnown RBP4.63□□□□□ -1.67
GTF3C3-207ENST00000451088 CNPY2Q9Y2B0 182 aa4.63□□□□□ -1.67
GTF3C3-207ENST00000451088 PCDHB7Q9Y5E2 793 aa4.63□□□□□ -1.67
GTF3C3-207ENST00000451088 TTC41PQ6P2S7 1318 aa4.63□□□□□ -1.67
GTF3C3-207ENST00000451088 MYO15AQ9UKN7 3530 aa4.63□□□□□ -1.67
GTF3C3-207ENST00000451088 ASXL3Q9C0F0 2248 aa4.62□□□□□ -1.67
GTF3C3-207ENST00000451088 A0A1W2PRG0 241 aa4.62□□□□□ -1.67
GTF3C3-207ENST00000451088 PODXLO00592 558 aa4.62□□□□□ -1.67
GTF3C3-207ENST00000451088 PCDH17O14917 1159 aa4.62□□□□□ -1.67
GTF3C3-207ENST00000451088 RNF113AO15541 343 aaKnown RBP4.62□□□□□ -1.67
GTF3C3-207ENST00000451088 ZBED4O75132 1171 aa4.62□□□□□ -1.67
GTF3C3-207ENST00000451088 KAT7O95251 611 aa4.62□□□□□ -1.67
GTF3C3-207ENST00000451088 MYL3P08590 195 aa4.62□□□□□ -1.67
GTF3C3-207ENST00000451088 HMGB1P09429 215 aaKnown RBP4.62□□□□□ -1.67
GTF3C3-207ENST00000451088 EEF2P13639 858 aaKnown RBP4.62□□□□□ -1.67
GTF3C3-207ENST00000451088 AKR1B1P15121 316 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms