RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 SARDHQ9UL12 918 aa14.73□□□□□ -0.05
TNF-208ENST00000449264 MTF2Q9Y483 593 aaPredicted RBP14.73□□□□□ -0.05
TNF-208ENST00000449264 CCDC78A2IDD5 438 aa14.72□□□□□ -0.05
TNF-208ENST00000449264 SDR42E2A6NKP2 422 aa14.72□□□□□ -0.05
TNF-208ENST00000449264 AP3B1O00203 1094 aa14.72□□□□□ -0.05
TNF-208ENST00000449264 ALOX15BO15296 676 aa14.72□□□□□ -0.05
TNF-208ENST00000449264 EIF3HO15372 352 aaKnown RBP eCLIP14.72□□□□□ -0.05
TNF-208ENST00000449264 ALPIP09923 528 aa14.72□□□□□ -0.05
TNF-208ENST00000449264 COL9A1P20849 921 aa14.72□□□□□ -0.05
TNF-208ENST00000449264 MAGEA4P43358 317 aa14.72□□□□□ -0.05
TNF-208ENST00000449264 GRIA4P48058 902 aa14.72□□□□□ -0.05
TNF-208ENST00000449264 STARD6P59095 220 aa14.72□□□□□ -0.05
TNF-208ENST00000449264 CAMK2GQ13555 558 aaPredicted RBP14.72□□□□□ -0.05
TNF-208ENST00000449264 LRRC32Q14392 662 aa14.72□□□□□ -0.05
TNF-208ENST00000449264 QPCTQ16769 361 aa14.72□□□□□ -0.05
TNF-208ENST00000449264 PKN3Q6P5Z2 889 aa14.72□□□□□ -0.05
TNF-208ENST00000449264 PYROXD1Q8WU10 500 aa14.72□□□□□ -0.05
TNF-208ENST00000449264 PIH1D2Q8WWB5 315 aa14.72□□□□□ -0.05
TNF-208ENST00000449264 CAVIN3Q969G5 261 aa14.72□□□□□ -0.05
TNF-208ENST00000449264 ECHDC3Q96DC8 303 aa14.72□□□□□ -0.05
TNF-208ENST00000449264 CFAP36Q96G28 342 aa14.72□□□□□ -0.05
TNF-208ENST00000449264 LRIG1Q96JA1 1093 aa14.72□□□□□ -0.05
TNF-208ENST00000449264 SIGLEC10Q96LC7 697 aa14.72□□□□□ -0.05
TNF-208ENST00000449264 FAM129BQ96TA1 746 aa14.72□□□□□ -0.05
TNF-208ENST00000449264 TRIM56Q9BRZ2 755 aaKnown RBP14.72□□□□□ -0.05
TNF-208ENST00000449264 PHACTR1Q9C0D0 580 aa14.72□□□□□ -0.05
TNF-208ENST00000449264 IL22Q9GZX6 179 aa14.72□□□□□ -0.05
TNF-208ENST00000449264 CDC42EP4Q9H3Q1 356 aaKnown RBP14.72□□□□□ -0.05
TNF-208ENST00000449264 TBC1D17Q9HA65 648 aa14.72□□□□□ -0.05
TNF-208ENST00000449264 LMAN1LQ9HAT1 526 aa14.72□□□□□ -0.05
TNF-208ENST00000449264 ARNT2Q9HBZ2 717 aa14.72□□□□□ -0.05
TNF-208ENST00000449264 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.72□□□□□ -0.05
TNF-208ENST00000449264 ANKRD66B4E2M5 251 aa14.71□□□□□ -0.05
TNF-208ENST00000449264 C1QTNF3-AMACRE9PGA6 284 aa14.71□□□□□ -0.05
TNF-208ENST00000449264 CHRNB1P11230 501 aa14.71□□□□□ -0.05
TNF-208ENST00000449264 NPY2RP49146 381 aa14.71□□□□□ -0.05
TNF-208ENST00000449264 METAP1P53582 386 aa14.71□□□□□ -0.05
TNF-208ENST00000449264 PMS2P54278 862 aa14.71□□□□□ -0.05
TNF-208ENST00000449264 PTPRRQ15256 657 aa14.71□□□□□ -0.05
TNF-208ENST00000449264 ZNF805Q5CZA5 627 aa14.71□□□□□ -0.05
TNF-208ENST00000449264 TJAP1Q5JTD0 557 aa14.71□□□□□ -0.05
TNF-208ENST00000449264 IGDCC3Q8IVU1 814 aa14.71□□□□□ -0.05
TNF-208ENST00000449264 PPHLN1Q8NEY8 458 aaKnown RBP14.71□□□□□ -0.05
TNF-208ENST00000449264 FLCNQ8NFG4 579 aa14.71□□□□□ -0.05
TNF-208ENST00000449264 UBLCP1Q8WVY7 318 aaPredicted RBP14.71□□□□□ -0.05
TNF-208ENST00000449264 STAMBPL1Q96FJ0 436 aa14.71□□□□□ -0.05
TNF-208ENST00000449264 POLR3BQ9NW08 1133 aaPredicted RBP14.71□□□□□ -0.05
TNF-208ENST00000449264 PPM1HQ9ULR3 514 aa14.71□□□□□ -0.05
TNF-208ENST00000449264 TEX264Q9Y6I9 313 aa14.71□□□□□ -0.05
TNF-208ENST00000449264 FAM170BA6NMN3 283 aa14.71□□□□□ -0.06
TNF-208ENST00000449264 RNASEH1O60930 286 aaKnown RBP14.71□□□□□ -0.06
TNF-208ENST00000449264 ACSL3O95573 720 aa14.71□□□□□ -0.06
TNF-208ENST00000449264 ALADP13716 330 aa14.71□□□□□ -0.06
TNF-208ENST00000449264 XPAP23025 273 aaPredicted RBP14.71□□□□□ -0.06
TNF-208ENST00000449264 ABL2P42684 1182 aa14.71□□□□□ -0.06
TNF-208ENST00000449264 RPL26P61254 145 aaKnown RBP14.71□□□□□ -0.06
TNF-208ENST00000449264 SEMG2Q02383 582 aa14.71□□□□□ -0.06
TNF-208ENST00000449264 EOGTQ5NDL2 527 aa14.71□□□□□ -0.06
TNF-208ENST00000449264 UBAP2Q5T6F2 1119 aaKnown RBP14.71□□□□□ -0.06
TNF-208ENST00000449264 BRAT1Q6PJG6 821 aa14.71□□□□□ -0.06
TNF-208ENST00000449264 PARS2Q7L3T8 475 aaKnown RBP14.71□□□□□ -0.06
TNF-208ENST00000449264 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.71□□□□□ -0.06
TNF-208ENST00000449264 ZNF687Q8N1G0 1237 aa14.71□□□□□ -0.06
TNF-208ENST00000449264 TMIEQ8NEW7 156 aa14.71□□□□□ -0.06
TNF-208ENST00000449264 LRRC39Q96DD0 335 aa14.71□□□□□ -0.06
TNF-208ENST00000449264 PPP1R16AQ96I34 528 aa14.71□□□□□ -0.06
TNF-208ENST00000449264 EBNA1BP2Q99848 306 aaKnown RBP14.71□□□□□ -0.06
TNF-208ENST00000449264 SEMA4AQ9H3S1 761 aa14.71□□□□□ -0.06
TNF-208ENST00000449264 ARFGAP3Q9NP61 516 aa14.71□□□□□ -0.06
TNF-208ENST00000449264 DYRK4Q9NR20 520 aa14.71□□□□□ -0.06
TNF-208ENST00000449264 NINJ2Q9NZG7 142 aa14.71□□□□□ -0.06
TNF-208ENST00000449264 ZC3H7BQ9UGR2 993 aaKnown RBP14.71□□□□□ -0.06
TNF-208ENST00000449264 MMP17Q9ULZ9 603 aa14.71□□□□□ -0.06
TNF-208ENST00000449264 RPL26L1Q9UNX3 145 aaKnown RBP14.71□□□□□ -0.06
TNF-208ENST00000449264 SPO11Q9Y5K1 396 aa14.71□□□□□ -0.06
TNF-208ENST00000449264 MUC3AQ02505 3323 aa14.71□□□□□ -0.06
TNF-208ENST00000449264 A0A0J9YYE9 177 aa14.7□□□□□ -0.06
TNF-208ENST00000449264 A0A0U1RQS6 177 aa14.7□□□□□ -0.06
TNF-208ENST00000449264 A0A1W2PQF6 199 aa14.7□□□□□ -0.06
TNF-208ENST00000449264 C16orf96A6NNT2 1141 aa14.7□□□□□ -0.06
TNF-208ENST00000449264 A8MX80 341 aa14.7□□□□□ -0.06
TNF-208ENST00000449264 PLK4O00444 970 aa14.7□□□□□ -0.06
TNF-208ENST00000449264 TRBC1P01850 177 aa14.7□□□□□ -0.06
TNF-208ENST00000449264 ITGB7P26010 798 aa14.7□□□□□ -0.06
TNF-208ENST00000449264 ZXDAP98168 799 aa14.7□□□□□ -0.06
TNF-208ENST00000449264 SATB1Q01826 763 aa14.7□□□□□ -0.06
TNF-208ENST00000449264 KYNUQ16719 465 aa14.7□□□□□ -0.06
TNF-208ENST00000449264 HSF5Q4G112 596 aaPredicted RBP14.7□□□□□ -0.06
TNF-208ENST00000449264 BEND6Q5SZJ8 279 aaPredicted RBP14.7□□□□□ -0.06
TNF-208ENST00000449264 CES3Q6UWW8 571 aa14.7□□□□□ -0.06
TNF-208ENST00000449264 USP45Q70EL2 814 aa14.7□□□□□ -0.06
TNF-208ENST00000449264 GLT6D1Q7Z4J2 308 aa14.7□□□□□ -0.06
TNF-208ENST00000449264 PALM2Q8IXS6 379 aa14.7□□□□□ -0.06
TNF-208ENST00000449264 OR2T3Q8NH03 318 aa14.7□□□□□ -0.06
TNF-208ENST00000449264 HNRNPLLQ8WVV9 542 aaKnown RBP14.7□□□□□ -0.06
TNF-208ENST00000449264 ARRDC3Q96B67 414 aa14.7□□□□□ -0.06
TNF-208ENST00000449264 TXLNGYQ9BZA5 131 aa14.7□□□□□ -0.06
TNF-208ENST00000449264 SLC6A17Q9H1V8 727 aa14.7□□□□□ -0.06
TNF-208ENST00000449264 RSPH9Q9H1X1 276 aaPredicted RBP14.7□□□□□ -0.06
TNF-208ENST00000449264 VPS37BQ9H9H4 285 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms