RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 RIMKLBQ9ULI2 386 aa19.4■□□□□ 0.7
RPS28-202ENST00000449223 TCAF1Q9Y4C2 921 aa19.4■□□□□ 0.7
RPS28-202ENST00000449223 ATP8B1O43520 1251 aa19.39■□□□□ 0.69
RPS28-202ENST00000449223 SIN3BO75182 1162 aa19.39■□□□□ 0.69
RPS28-202ENST00000449223 LEFTY1O75610 366 aa19.39■□□□□ 0.69
RPS28-202ENST00000449223 USP1O94782 785 aa19.39■□□□□ 0.69
RPS28-202ENST00000449223 PAPSS2O95340 614 aaPredicted RBP19.39■□□□□ 0.69
RPS28-202ENST00000449223 PRNPP04156 253 aa19.39■□□□□ 0.69
RPS28-202ENST00000449223 BMP1P13497 986 aa19.39■□□□□ 0.69
RPS28-202ENST00000449223 CRADDP78560 199 aa19.39■□□□□ 0.69
RPS28-202ENST00000449223 LAMB3Q13751 1172 aa19.39■□□□□ 0.69
RPS28-202ENST00000449223 QPCTQ16769 361 aa19.39■□□□□ 0.69
RPS28-202ENST00000449223 CHPFQ8IZ52 775 aa19.39■□□□□ 0.69
RPS28-202ENST00000449223 ZNF366Q8N895 744 aa19.39■□□□□ 0.69
RPS28-202ENST00000449223 BRSK1Q8TDC3 778 aa19.39■□□□□ 0.69
RPS28-202ENST00000449223 UBLCP1Q8WVY7 318 aaPredicted RBP19.39■□□□□ 0.69
RPS28-202ENST00000449223 SRPK1Q96SB4 655 aaKnown RBP19.39■□□□□ 0.69
RPS28-202ENST00000449223 FAM129BQ96TA1 746 aa19.39■□□□□ 0.69
RPS28-202ENST00000449223 C19orf43Q9BQ61 176 aa19.39■□□□□ 0.69
RPS28-202ENST00000449223 MTG2Q9H4K7 406 aa19.39■□□□□ 0.69
RPS28-202ENST00000449223 MAGEE1Q9HCI5 957 aa19.39■□□□□ 0.69
RPS28-202ENST00000449223 HACD3Q9P035 362 aa19.39■□□□□ 0.69
RPS28-202ENST00000449223 PPM1HQ9ULR3 514 aa19.39■□□□□ 0.69
RPS28-202ENST00000449223 PHTF1Q9UMS5 762 aa19.39■□□□□ 0.69
RPS28-202ENST00000449223 MAD1L1Q9Y6D9 718 aa19.39■□□□□ 0.69
RPS28-202ENST00000449223 A0A0J9YYE9 177 aa19.38■□□□□ 0.69
RPS28-202ENST00000449223 HEATR9A2RTY3 570 aa19.38■□□□□ 0.69
RPS28-202ENST00000449223 ANTXRLA6NF34 631 aa19.38■□□□□ 0.69
RPS28-202ENST00000449223 MROH6A6NGR9 719 aa19.38■□□□□ 0.69
RPS28-202ENST00000449223 BNIP3LO60238 219 aa19.38■□□□□ 0.69
RPS28-202ENST00000449223 TRBC1P01850 177 aa19.38■□□□□ 0.69
RPS28-202ENST00000449223 TPH1P17752 444 aa19.38■□□□□ 0.69
RPS28-202ENST00000449223 PSMA3P25788 255 aa19.38■□□□□ 0.69
RPS28-202ENST00000449223 NTSR1P30989 418 aa19.38■□□□□ 0.69
RPS28-202ENST00000449223 SLC29A2Q14542 456 aa19.38■□□□□ 0.69
RPS28-202ENST00000449223 HP1BP3Q5SSJ5 553 aaPredicted RBP19.38■□□□□ 0.69
RPS28-202ENST00000449223 CFAP58Q5T655 872 aa19.38■□□□□ 0.69
RPS28-202ENST00000449223 UBAP2Q5T6F2 1119 aaKnown RBP19.38■□□□□ 0.69
RPS28-202ENST00000449223 PKN3Q6P5Z2 889 aa19.38■□□□□ 0.69
RPS28-202ENST00000449223 ZNF852Q6ZMS4 543 aa19.38■□□□□ 0.69
RPS28-202ENST00000449223 UNC5AQ6ZN44 842 aa19.38■□□□□ 0.69
RPS28-202ENST00000449223 ZSWIM9Q86XI8 627 aa19.38■□□□□ 0.69
RPS28-202ENST00000449223 PALM2Q8IXS6 379 aa19.38■□□□□ 0.69
RPS28-202ENST00000449223 UBALD2Q8IYN6 164 aa19.38■□□□□ 0.69
RPS28-202ENST00000449223 ZNF687Q8N1G0 1237 aa19.38■□□□□ 0.69
RPS28-202ENST00000449223 IL17RCQ8NAC3 791 aa19.38■□□□□ 0.69
RPS28-202ENST00000449223 LPCAT1Q8NF37 534 aa19.38■□□□□ 0.69
RPS28-202ENST00000449223 RMDN1Q96DB5 314 aa19.38■□□□□ 0.69
RPS28-202ENST00000449223 MCCC1Q96RQ3 725 aaPredicted RBP19.38■□□□□ 0.69
RPS28-202ENST00000449223 PRSS16Q9NQE7 514 aa19.38■□□□□ 0.69
RPS28-202ENST00000449223 TRIOO75962 3097 aa19.37■□□□□ 0.69
RPS28-202ENST00000449223 ALDH1A2O94788 518 aa19.37■□□□□ 0.69
RPS28-202ENST00000449223 ACSL3O95573 720 aa19.37■□□□□ 0.69
RPS28-202ENST00000449223 UGT2B4P06133 528 aa19.37■□□□□ 0.69
RPS28-202ENST00000449223 POLBP06746 335 aa19.37■□□□□ 0.69
RPS28-202ENST00000449223 EPHX1P07099 455 aa19.37■□□□□ 0.69
RPS28-202ENST00000449223 TIE1P35590 1138 aa19.37■□□□□ 0.69
RPS28-202ENST00000449223 POLR2LP62875 67 aaKnown RBP19.37■□□□□ 0.69
RPS28-202ENST00000449223 POU6F1Q14863 301 aa19.37■□□□□ 0.69
RPS28-202ENST00000449223 CRYMQ14894 314 aa19.37■□□□□ 0.69
RPS28-202ENST00000449223 ZNF805Q5CZA5 627 aa19.37■□□□□ 0.69
RPS28-202ENST00000449223 ALS2CLQ60I27 953 aa19.37■□□□□ 0.69
RPS28-202ENST00000449223 DENND2CQ68D51 928 aa19.37■□□□□ 0.69
RPS28-202ENST00000449223 CASC4Q6P4E1 433 aa19.37■□□□□ 0.69
RPS28-202ENST00000449223 ZNF449Q6P9G9 518 aa19.37■□□□□ 0.69
RPS28-202ENST00000449223 C3orf62Q6ZUJ4 267 aa19.37■□□□□ 0.69
RPS28-202ENST00000449223 NLRP9Q7RTR0 991 aa19.37■□□□□ 0.69
RPS28-202ENST00000449223 DSG4Q86SJ6 1040 aa19.37■□□□□ 0.69
RPS28-202ENST00000449223 STK40Q8N2I9 435 aa19.37■□□□□ 0.69
RPS28-202ENST00000449223 PPHLN1Q8NEY8 458 aaKnown RBP19.37■□□□□ 0.69
RPS28-202ENST00000449223 GSDMBQ8TAX9 411 aa19.37■□□□□ 0.69
RPS28-202ENST00000449223 GRIN3AQ8TCU5 1115 aa19.37■□□□□ 0.69
RPS28-202ENST00000449223 PDCD6IPQ8WUM4 868 aaKnown RBP19.37■□□□□ 0.69
RPS28-202ENST00000449223 SCRN2Q96FV2 425 aa19.37■□□□□ 0.69
RPS28-202ENST00000449223 ASB2Q96Q27 587 aa19.37■□□□□ 0.69
RPS28-202ENST00000449223 TRABDQ9H4I3 376 aa19.37■□□□□ 0.69
RPS28-202ENST00000449223 FBRSQ9HAH7 460 aa19.37■□□□□ 0.69
RPS28-202ENST00000449223 ARHGEF3Q9NR81 526 aa19.37■□□□□ 0.69
RPS28-202ENST00000449223 CHRAC1Q9NRG0 131 aa19.37■□□□□ 0.69
RPS28-202ENST00000449223 TREX1Q9NSU2 369 aa19.37■□□□□ 0.69
RPS28-202ENST00000449223 NFS1Q9Y697 457 aa19.37■□□□□ 0.69
RPS28-202ENST00000449223 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.37■□□□□ 0.69
RPS28-202ENST00000449223 ZCWPW2A0A1B0GU75 182 aa19.36■□□□□ 0.69
RPS28-202ENST00000449223 LDB2O43679 373 aa19.36■□□□□ 0.69
RPS28-202ENST00000449223 C1QAP02745 245 aa19.36■□□□□ 0.69
RPS28-202ENST00000449223 SSTR1P30872 391 aa19.36■□□□□ 0.69
RPS28-202ENST00000449223 PHBP35232 272 aa19.36■□□□□ 0.69
RPS28-202ENST00000449223 STARD6P59095 220 aa19.36■□□□□ 0.69
RPS28-202ENST00000449223 ACVR1Q04771 509 aa19.36■□□□□ 0.69
RPS28-202ENST00000449223 ARSIQ5FYB1 569 aa19.36■□□□□ 0.69
RPS28-202ENST00000449223 SPANXN3Q5MJ09 141 aa19.36■□□□□ 0.69
RPS28-202ENST00000449223 SYNPOQ8N3V7 929 aa19.36■□□□□ 0.69
RPS28-202ENST00000449223 KLHL32Q96NJ5 620 aa19.36■□□□□ 0.69
RPS28-202ENST00000449223 CD248Q9HCU0 757 aa19.36■□□□□ 0.69
RPS28-202ENST00000449223 MOCS1Q9NZB8 636 aa19.36■□□□□ 0.69
RPS28-202ENST00000449223 RPS6KL1Q9Y6S9 549 aa19.36■□□□□ 0.69
RPS28-202ENST00000449223 FAM169AQ9Y6X4 670 aa19.36■□□□□ 0.69
RPS28-202ENST00000449223 A0A087WUV0 522 aaPredicted RBP19.35■□□□□ 0.69
RPS28-202ENST00000449223 TCRBV9S1A1TA0A576 114 aa19.35■□□□□ 0.69
RPS28-202ENST00000449223 CAPN8A6NHC0 703 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms