RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 MFAP3P55082 362 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 ZNF45Q02386 682 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 GAD2Q05329 585 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 ART3Q13508 389 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 TSC22D1Q15714 1073 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 FAM182AQ5T1J6 154 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 TATDN1Q6P1N9 297 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 CHST15Q7LFX5 561 aaPredicted RBP10.81□□□□□ -0.68
LINC00342-202ENST00000448494 DPP9Q86TI2 863 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 FBXO36Q8NEA4 188 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 OR8K5Q8NH50 307 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 WDR48Q8TAF3 677 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 PPWD1Q96BP3 646 aaKnown RBP10.81□□□□□ -0.68
LINC00342-202ENST00000448494 UCK2Q9BZX2 261 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 ROGDIQ9GZN7 287 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 TUFT1Q9NNX1 390 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 FBXL12Q9NXK8 326 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.81□□□□□ -0.68
LINC00342-202ENST00000448494 APEX2Q9UBZ4 518 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 PRR36Q9H6K5 1346 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 H0YAE9 185 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 I3L521 148 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 PDXKO00764 312 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 AKAP3O75969 853 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 VAPBO95292 243 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 RASAL1O95294 804 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 TOP3BO95985 862 aaKnown RBP10.8□□□□□ -0.68
LINC00342-202ENST00000448494 ZNF30P17039 623 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 RAB3AP20336 220 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 OSBPP22059 807 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 PSMA4P25789 261 aaKnown RBP10.8□□□□□ -0.68
LINC00342-202ENST00000448494 DPP6P42658 865 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 SCNN1GP51170 649 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 IL1RL1Q01638 556 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 CSTF3Q12996 717 aaKnown RBP10.8□□□□□ -0.68
LINC00342-202ENST00000448494 GPR50Q13585 617 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 ELOAQ14241 798 aaKnown RBP10.8□□□□□ -0.68
LINC00342-202ENST00000448494 ZNF267Q14586 743 aaPredicted RBP10.8□□□□□ -0.68
LINC00342-202ENST00000448494 STARD3Q14849 445 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 ATP6AP1Q15904 470 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 KRT79Q5XKE5 535 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 RETSATQ6NUM9 610 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 UNC5DQ6UXZ4 953 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 PTAR1Q7Z6K3 402 aaPredicted RBP10.8□□□□□ -0.68
LINC00342-202ENST00000448494 RETREG3Q86VR2 466 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 MARCH10Q8NA82 808 aaPredicted RBP10.8□□□□□ -0.68
LINC00342-202ENST00000448494 OR4M1Q8NGD0 313 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 SLC20A1Q8WUM9 679 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 DEDD2Q8WXF8 326 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 UFD1Q92890 307 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 PTP4A1Q93096 173 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 PHOX2BQ99453 314 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 BDH2Q9BUT1 245 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 PCDH9Q9HC56 1237 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 PNPLA8Q9NP80 782 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 PRDM11Q9NQV5 511 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 GABBR1Q9UBS5 961 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 TLR6Q9Y2C9 796 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 TCP10L2B9ZVM9 353 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 F8W036 122 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 GATCO43716 136 aaKnown RBP10.8□□□□□ -0.68
LINC00342-202ENST00000448494 BANF1O75531 89 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 SERPINE1P05121 402 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 ENO3P13929 434 aaPredicted RBP10.8□□□□□ -0.68
LINC00342-202ENST00000448494 VEGFAP15692 232 aaPredicted RBP10.8□□□□□ -0.68
LINC00342-202ENST00000448494 RPS5P46782 204 aaKnown RBP10.8□□□□□ -0.68
LINC00342-202ENST00000448494 YAP1P46937 504 aaKnown RBP10.8□□□□□ -0.68
LINC00342-202ENST00000448494 ATXN3P54252 364 aaPredicted RBP10.8□□□□□ -0.68
LINC00342-202ENST00000448494 GABARAPL2P60520 117 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 ABCE1P61221 599 aaKnown RBP10.8□□□□□ -0.68
LINC00342-202ENST00000448494 FAPQ12884 760 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 PSMD5Q16401 504 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 KNOP1Q1ED39 458 aaKnown RBP10.8□□□□□ -0.68
LINC00342-202ENST00000448494 FASTKD1Q53R41 847 aaKnown RBP10.8□□□□□ -0.68
LINC00342-202ENST00000448494 ZNF484Q5JVG2 852 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 TYW3Q6IPR3 259 aaKnown RBP10.8□□□□□ -0.68
LINC00342-202ENST00000448494 EPGNQ6UW88 154 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 ZCCHC23Q6ZST2 131 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 PAGE2Q7Z2X7 111 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 POLNQ7Z5Q5 900 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 SPRED1Q7Z699 444 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 SPATA2LQ8IUW3 424 aaPredicted RBP10.8□□□□□ -0.68
LINC00342-202ENST00000448494 PPIL6Q8IXY8 311 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 MCUQ8NE86 351 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 TRPM4Q8TD43 1214 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 SMG7Q92540 1137 aaKnown RBP10.8□□□□□ -0.68
LINC00342-202ENST00000448494 RCN3Q96D15 328 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 HSFY1Q96LI6 401 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 MBOAT7Q96N66 472 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 SEC22CQ9BRL7 303 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 SLIRPQ9GZT3 109 aaKnown RBP10.8□□□□□ -0.68
LINC00342-202ENST00000448494 RNPEPQ9H4A4 650 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 TAS2R9Q9NYW1 312 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 PCDH10Q9P2E7 1040 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 GMPR2Q9P2T1 348 aaKnown RBP10.8□□□□□ -0.68
LINC00342-202ENST00000448494 PRKAG2Q9UGJ0 569 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 PCOLCE2Q9UKZ9 415 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 TMPRSS11EQ9UL52 423 aa10.8□□□□□ -0.68
LINC00342-202ENST00000448494 COPG1Q9Y678 874 aaKnown RBP10.8□□□□□ -0.68
LINC00342-202ENST00000448494 AGAP5A6NIR3 686 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms