RNA–Protein interactions for RNA: ENST00000448301.6

CTSS-202, Transcript of cathepsin S, humanhuman

TSL 2 BASIC

Gene CTSS, Length 1,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-202ENST00000448301 UBP1Q9NZI7 540 aa14.13□□□□□ -0.15
CTSS-202ENST00000448301 MBD1Q9UIS9 605 aaPredicted RBP14.13□□□□□ -0.15
CTSS-202ENST00000448301 CHKBQ9Y259 395 aa14.13□□□□□ -0.15
CTSS-202ENST00000448301 PPIL1Q9Y3C6 166 aa14.13□□□□□ -0.15
CTSS-202ENST00000448301 NEU2Q9Y3R4 380 aa14.13□□□□□ -0.15
CTSS-202ENST00000448301 FADS3Q9Y5Q0 445 aa14.13□□□□□ -0.15
CTSS-202ENST00000448301 SPAG17Q6Q759 2223 aa14.13□□□□□ -0.15
CTSS-202ENST00000448301 LOC285095A0A1B0GVY8 99 aa14.12□□□□□ -0.15
CTSS-202ENST00000448301 LRRC72A6NJI9 287 aa14.12□□□□□ -0.15
CTSS-202ENST00000448301 ERI2A8K979 691 aaKnown RBP14.12□□□□□ -0.15
CTSS-202ENST00000448301 C10orf142B7Z368 130 aa14.12□□□□□ -0.15
CTSS-202ENST00000448301 H0Y858 1186 aa14.12□□□□□ -0.15
CTSS-202ENST00000448301 AREL1O15033 823 aa14.12□□□□□ -0.15
CTSS-202ENST00000448301 PSMD3O43242 534 aa14.12□□□□□ -0.15
CTSS-202ENST00000448301 SPINT1O43278 529 aa14.12□□□□□ -0.15
CTSS-202ENST00000448301 EPOP01588 193 aa14.12□□□□□ -0.15
CTSS-202ENST00000448301 PTGIRP43119 386 aa14.12□□□□□ -0.15
CTSS-202ENST00000448301 C2orf54Q08AI8 447 aa14.12□□□□□ -0.15
CTSS-202ENST00000448301 SEMA5AQ13591 1074 aa14.12□□□□□ -0.15
CTSS-202ENST00000448301 DHX34Q14147 1143 aaKnown RBP14.12□□□□□ -0.15
CTSS-202ENST00000448301 FAXCQ5TGI0 409 aa14.12□□□□□ -0.15
CTSS-202ENST00000448301 KCTD11Q693B1 232 aa14.12□□□□□ -0.15
CTSS-202ENST00000448301 ERAP2Q6P179 960 aa14.12□□□□□ -0.15
CTSS-202ENST00000448301 ZC3H14Q6PJT7 736 aaKnown RBP14.12□□□□□ -0.15
CTSS-202ENST00000448301 NDUFAF2Q8N183 169 aa14.12□□□□□ -0.15
CTSS-202ENST00000448301 LPCAT1Q8NF37 534 aa14.12□□□□□ -0.15
CTSS-202ENST00000448301 IPMKQ8NFU5 416 aa14.12□□□□□ -0.15
CTSS-202ENST00000448301 OR2T34Q8NGX1 318 aa14.12□□□□□ -0.15
CTSS-202ENST00000448301 LRRC45Q96CN5 670 aa14.12□□□□□ -0.15
CTSS-202ENST00000448301 MCCC1Q96RQ3 725 aaPredicted RBP14.12□□□□□ -0.15
CTSS-202ENST00000448301 IRF2BPLQ9H1B7 796 aa14.12□□□□□ -0.15
CTSS-202ENST00000448301 PCED1AQ9H1Q7 454 aa14.12□□□□□ -0.15
CTSS-202ENST00000448301 PREBQ9HCU5 417 aa14.12□□□□□ -0.15
CTSS-202ENST00000448301 RAB6BQ9NRW1 208 aa14.12□□□□□ -0.15
CTSS-202ENST00000448301 INVSQ9Y283 1065 aa14.12□□□□□ -0.15
CTSS-202ENST00000448301 MYLKQ15746 1914 aa14.12□□□□□ -0.15
CTSS-202ENST00000448301 PLXNA2O75051 1894 aa14.12□□□□□ -0.15
CTSS-202ENST00000448301 SCN8AQ9UQD0 1980 aa14.11□□□□□ -0.15
CTSS-202ENST00000448301 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.11□□□□□ -0.15
CTSS-202ENST00000448301 A0A0J9YYE9 177 aa14.11□□□□□ -0.15
CTSS-202ENST00000448301 ANKRD66B4E2M5 251 aa14.11□□□□□ -0.15
CTSS-202ENST00000448301 RIOK3O14730 519 aaKnown RBP14.11□□□□□ -0.15
CTSS-202ENST00000448301 HRO43593 1189 aa14.11□□□□□ -0.15
CTSS-202ENST00000448301 TSPAN6O43657 245 aa14.11□□□□□ -0.15
CTSS-202ENST00000448301 NDUFS2O75306 463 aa14.11□□□□□ -0.15
CTSS-202ENST00000448301 AP2A1O95782 977 aa14.11□□□□□ -0.15
CTSS-202ENST00000448301 NDST3O95803 873 aa14.11□□□□□ -0.15
CTSS-202ENST00000448301 TRBC1P01850 177 aa14.11□□□□□ -0.15
CTSS-202ENST00000448301 HLA-DPA1P20036 260 aa14.11□□□□□ -0.15
CTSS-202ENST00000448301 BCKDHBP21953 392 aa14.11□□□□□ -0.15
CTSS-202ENST00000448301 ADRA1AP35348 466 aa14.11□□□□□ -0.15
CTSS-202ENST00000448301 MMP12P39900 470 aa14.11□□□□□ -0.15
CTSS-202ENST00000448301 TNNT3P45378 269 aaPredicted RBP14.11□□□□□ -0.15
CTSS-202ENST00000448301 EPHB1P54762 984 aa14.11□□□□□ -0.15
CTSS-202ENST00000448301 PTPN5P54829 565 aa14.11□□□□□ -0.15
CTSS-202ENST00000448301 DR1Q01658 176 aa14.11□□□□□ -0.15
CTSS-202ENST00000448301 RPL6Q02878 288 aaKnown RBP14.11□□□□□ -0.15
CTSS-202ENST00000448301 SRSF5Q13243 272 aaKnown RBP14.11□□□□□ -0.15
CTSS-202ENST00000448301 PTK6Q13882 451 aa14.11□□□□□ -0.15
CTSS-202ENST00000448301 GALNT3Q14435 633 aa14.11□□□□□ -0.15
CTSS-202ENST00000448301 PPP1R7Q15435 360 aa14.11□□□□□ -0.15
CTSS-202ENST00000448301 LRRC73Q5JTD7 316 aa14.11□□□□□ -0.15
CTSS-202ENST00000448301 SPDYCQ5MJ68 293 aa14.11□□□□□ -0.15
CTSS-202ENST00000448301 NEK5Q6P3R8 708 aa14.11□□□□□ -0.15
CTSS-202ENST00000448301 SYDE1Q6ZW31 735 aaPredicted RBP14.11□□□□□ -0.15
CTSS-202ENST00000448301 USP45Q70EL2 814 aa14.11□□□□□ -0.15
CTSS-202ENST00000448301 CCHCR1Q8TD31 782 aa14.11□□□□□ -0.15
CTSS-202ENST00000448301 SCRN2Q96FV2 425 aa14.11□□□□□ -0.15
CTSS-202ENST00000448301 KRT12Q99456 494 aa14.11□□□□□ -0.15
CTSS-202ENST00000448301 GPR174Q9BXC1 333 aa14.11□□□□□ -0.15
CTSS-202ENST00000448301 FSD1LQ9BXM9 530 aa14.11□□□□□ -0.15
CTSS-202ENST00000448301 LRRC40Q9H9A6 602 aa14.11□□□□□ -0.15
CTSS-202ENST00000448301 ETNK1Q9HBU6 452 aa14.11□□□□□ -0.15
CTSS-202ENST00000448301 PCDH12Q9NPG4 1184 aa14.11□□□□□ -0.15
CTSS-202ENST00000448301 CAPN8A6NHC0 703 aa14.1□□□□□ -0.15
CTSS-202ENST00000448301 MAP3K13O43283 966 aa14.1□□□□□ -0.15
CTSS-202ENST00000448301 ATXN1LP0C7T5 689 aaKnown RBP14.1□□□□□ -0.15
CTSS-202ENST00000448301 CYP2A6P11509 494 aaPredicted RBP14.1□□□□□ -0.15
CTSS-202ENST00000448301 TRIP13Q15645 432 aaPredicted RBP14.1□□□□□ -0.15
CTSS-202ENST00000448301 QPCTQ16769 361 aa14.1□□□□□ -0.15
CTSS-202ENST00000448301 TMEM52BQ4KMG9 183 aa14.1□□□□□ -0.15
CTSS-202ENST00000448301 KIAA1161Q6NSJ0 714 aa14.1□□□□□ -0.15
CTSS-202ENST00000448301 CCDC70Q6NSX1 233 aa14.1□□□□□ -0.15
CTSS-202ENST00000448301 RANBP10Q6VN20 620 aa14.1□□□□□ -0.15
CTSS-202ENST00000448301 DPPA4Q7L190 304 aa14.1□□□□□ -0.15
CTSS-202ENST00000448301 TAB3Q8N5C8 712 aaPredicted RBP14.1□□□□□ -0.15
CTSS-202ENST00000448301 PDCD7Q8N8D1 485 aaKnown RBP14.1□□□□□ -0.15
CTSS-202ENST00000448301 MNS1Q8NEH6 495 aa14.1□□□□□ -0.15
CTSS-202ENST00000448301 CADM4Q8NFZ8 388 aa14.1□□□□□ -0.15
CTSS-202ENST00000448301 RMDN1Q96DB5 314 aa14.1□□□□□ -0.15
CTSS-202ENST00000448301 ZC3H10Q96K80 434 aaKnown RBP14.1□□□□□ -0.15
CTSS-202ENST00000448301 LYSMD1Q96S90 227 aa14.1□□□□□ -0.15
CTSS-202ENST00000448301 FICDQ9BVA6 458 aa14.1□□□□□ -0.15
CTSS-202ENST00000448301 EIF2B3Q9NR50 452 aaKnown RBP14.1□□□□□ -0.15
CTSS-202ENST00000448301 GGT7Q9UJ14 662 aa14.1□□□□□ -0.15
CTSS-202ENST00000448301 TPX2Q9ULW0 747 aaKnown RBP14.1□□□□□ -0.15
CTSS-202ENST00000448301 ITM2BQ9Y287 266 aa14.1□□□□□ -0.15
CTSS-202ENST00000448301 TRPM6Q9BX84 2022 aa14.1□□□□□ -0.15
CTSS-202ENST00000448301 DOCK9Q9BZ29 2069 aa14.1□□□□□ -0.15
CTSS-202ENST00000448301 TBC1D3DA0A087WVF3 549 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms