RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 MMP12P39900 470 aa17.83■□□□□ 0.44
DDX56-207ENST00000448192 CDH6P55285 790 aa17.83■□□□□ 0.44
DDX56-207ENST00000448192 E2F1Q01094 437 aa17.83■□□□□ 0.44
DDX56-207ENST00000448192 HADHQ16836 314 aaKnown RBP17.83■□□□□ 0.44
DDX56-207ENST00000448192 FAXCQ5TGI0 409 aa17.83■□□□□ 0.44
DDX56-207ENST00000448192 RBFAQ8N0V3 343 aa17.83■□□□□ 0.44
DDX56-207ENST00000448192 ATPAF2Q8N5M1 289 aa17.83■□□□□ 0.44
DDX56-207ENST00000448192 ZNF564Q8TBZ8 553 aaPredicted RBP17.83■□□□□ 0.44
DDX56-207ENST00000448192 BTN2A2Q8WVV5 523 aa17.83■□□□□ 0.44
DDX56-207ENST00000448192 TCEAL2Q9H3H9 227 aaPredicted RBP17.83■□□□□ 0.44
DDX56-207ENST00000448192 CTTNBP2NLQ9P2B4 639 aa17.83■□□□□ 0.44
DDX56-207ENST00000448192 PKD1L2Q7Z442 2459 aa17.82■□□□□ 0.44
DDX56-207ENST00000448192 CBFA2T2O43439 604 aa17.82■□□□□ 0.44
DDX56-207ENST00000448192 SERPINB6P35237 376 aa17.82■□□□□ 0.44
DDX56-207ENST00000448192 AP1S1P61966 158 aa17.82■□□□□ 0.44
DDX56-207ENST00000448192 POLR2LP62875 67 aaKnown RBP17.82■□□□□ 0.44
DDX56-207ENST00000448192 INSM1Q01101 510 aaPredicted RBP17.82■□□□□ 0.44
DDX56-207ENST00000448192 WSCD2Q2TBF2 565 aa17.82■□□□□ 0.44
DDX56-207ENST00000448192 DEFB133Q30KQ1 61 aa17.82■□□□□ 0.44
DDX56-207ENST00000448192 PRRT3Q5FWE3 981 aa17.82■□□□□ 0.44
DDX56-207ENST00000448192 SPECC1LQ69YQ0 1117 aa17.82■□□□□ 0.44
DDX56-207ENST00000448192 MACC1Q6ZN28 852 aa17.82■□□□□ 0.44
DDX56-207ENST00000448192 PHACTR4Q8IZ21 702 aa17.82■□□□□ 0.44
DDX56-207ENST00000448192 NSMCE1Q8WV22 266 aa17.82■□□□□ 0.44
DDX56-207ENST00000448192 SLC13A1Q9BZW2 595 aa17.82■□□□□ 0.44
DDX56-207ENST00000448192 EVA1BQ9NVM1 165 aa17.82■□□□□ 0.44
DDX56-207ENST00000448192 SPASTQ9UBP0 616 aa17.82■□□□□ 0.44
DDX56-207ENST00000448192 APOBEC3BQ9UH17 382 aaKnown RBP17.82■□□□□ 0.44
DDX56-207ENST00000448192 RAXQ9Y2V3 346 aa17.82■□□□□ 0.44
DDX56-207ENST00000448192 CSNK1G3Q9Y6M4 447 aa17.82■□□□□ 0.44
DDX56-207ENST00000448192 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.81■□□□□ 0.44
DDX56-207ENST00000448192 A8MX80 341 aa17.81■□□□□ 0.44
DDX56-207ENST00000448192 TOR1BO14657 336 aa17.81■□□□□ 0.44
DDX56-207ENST00000448192 MAFKO60675 156 aa17.81■□□□□ 0.44
DDX56-207ENST00000448192 CD48P09326 243 aa17.81■□□□□ 0.44
DDX56-207ENST00000448192 HNRNPH3P31942 346 aaKnown RBP17.81■□□□□ 0.44
DDX56-207ENST00000448192 DUSP3P51452 185 aaPredicted RBP17.81■□□□□ 0.44
DDX56-207ENST00000448192 MMRN1Q13201 1228 aa17.81■□□□□ 0.44
DDX56-207ENST00000448192 C1orf61Q13536 156 aa17.81■□□□□ 0.44
DDX56-207ENST00000448192 INPP5AQ14642 412 aa17.81■□□□□ 0.44
DDX56-207ENST00000448192 ZCCHC8Q6NZY4 707 aaKnown RBP17.81■□□□□ 0.44
DDX56-207ENST00000448192 BBS5Q8N3I7 341 aa17.81■□□□□ 0.44
DDX56-207ENST00000448192 FAM181AQ8N9Y4 354 aa17.81■□□□□ 0.44
DDX56-207ENST00000448192 OR8K1Q8NGG5 319 aa17.81■□□□□ 0.44
DDX56-207ENST00000448192 PDCD6IPQ8WUM4 868 aaKnown RBP17.81■□□□□ 0.44
DDX56-207ENST00000448192 CTNNBL1Q8WYA6 563 aaPredicted RBP17.81■□□□□ 0.44
DDX56-207ENST00000448192 ECHDC3Q96DC8 303 aa17.81■□□□□ 0.44
DDX56-207ENST00000448192 NSMCE3Q96MG7 304 aa17.81■□□□□ 0.44
DDX56-207ENST00000448192 IL12RB2Q99665 862 aa17.81■□□□□ 0.44
DDX56-207ENST00000448192 PACSIN1Q9BY11 444 aa17.81■□□□□ 0.44
DDX56-207ENST00000448192 TSPY26PQ9H489 355 aa17.81■□□□□ 0.44
DDX56-207ENST00000448192 DEF6Q9H4E7 631 aa17.81■□□□□ 0.44
DDX56-207ENST00000448192 SCUBE2Q9NQ36 999 aa17.81■□□□□ 0.44
DDX56-207ENST00000448192 DKK4Q9UBT3 224 aa17.81■□□□□ 0.44
DDX56-207ENST00000448192 PNMA8BQ9ULN7 279 aaPredicted RBP17.81■□□□□ 0.44
DDX56-207ENST00000448192 NENFQ9UMX5 172 aa17.81■□□□□ 0.44
DDX56-207ENST00000448192 CLCA2Q9UQC9 943 aa17.81■□□□□ 0.44
DDX56-207ENST00000448192 KNTC1P50748 2209 aa17.81■□□□□ 0.44
DDX56-207ENST00000448192 LY6G6EA0A0G2JKS1 128 aa17.8■□□□□ 0.44
DDX56-207ENST00000448192 TRAFD1O14545 582 aaPredicted RBP17.8■□□□□ 0.44
DDX56-207ENST00000448192 GCATO75600 419 aa17.8■□□□□ 0.44
DDX56-207ENST00000448192 PEX11BO96011 259 aa17.8■□□□□ 0.44
DDX56-207ENST00000448192 PCCBP05166 539 aa17.8■□□□□ 0.44
DDX56-207ENST00000448192 H2AFZP0C0S5 128 aa17.8■□□□□ 0.44
DDX56-207ENST00000448192 ELFN1P0C7U0 828 aa17.8■□□□□ 0.44
DDX56-207ENST00000448192 HSPA9P38646 679 aaKnown RBP17.8■□□□□ 0.44
DDX56-207ENST00000448192 ADKP55263 362 aaKnown RBP17.8■□□□□ 0.44
DDX56-207ENST00000448192 PPARDQ03181 441 aa17.8■□□□□ 0.44
DDX56-207ENST00000448192 TRIM14Q14142 442 aa17.8■□□□□ 0.44
DDX56-207ENST00000448192 SLC18A3Q16572 532 aa17.8■□□□□ 0.44
DDX56-207ENST00000448192 TSR1Q2NL82 804 aaKnown RBP17.8■□□□□ 0.44
DDX56-207ENST00000448192 ATP13A4Q4VNC1 1196 aa17.8■□□□□ 0.44
DDX56-207ENST00000448192 H2AFVQ71UI9 128 aa17.8■□□□□ 0.44
DDX56-207ENST00000448192 CPNE8Q86YQ8 564 aa17.8■□□□□ 0.44
DDX56-207ENST00000448192 HID1Q8IV36 788 aa17.8■□□□□ 0.44
DDX56-207ENST00000448192 PGBD5Q8N414 524 aa17.8■□□□□ 0.44
DDX56-207ENST00000448192 RFFLQ8WZ73 363 aa17.8■□□□□ 0.44
DDX56-207ENST00000448192 NXPE2Q96DL1 559 aa17.8■□□□□ 0.44
DDX56-207ENST00000448192 APOOQ9BUR5 198 aa17.8■□□□□ 0.44
DDX56-207ENST00000448192 LRRC61Q9BV99 259 aa17.8■□□□□ 0.44
DDX56-207ENST00000448192 USP29Q9HBJ7 922 aa17.8■□□□□ 0.44
DDX56-207ENST00000448192 ZNHIT6Q9NWK9 470 aaKnown RBP17.8■□□□□ 0.44
DDX56-207ENST00000448192 RCOR3Q9P2K3 495 aaPredicted RBP17.8■□□□□ 0.44
DDX56-207ENST00000448192 UVRAGQ9P2Y5 699 aa17.8■□□□□ 0.44
DDX56-207ENST00000448192 OR1A2Q9Y585 309 aa17.8■□□□□ 0.44
DDX56-207ENST00000448192 PCDHGC4Q9Y5F7 938 aa17.8■□□□□ 0.44
DDX56-207ENST00000448192 AK5Q9Y6K8 562 aa17.8■□□□□ 0.44
DDX56-207ENST00000448192 U3KQA8 63 aa17.8■□□□□ 0.44
DDX56-207ENST00000448192 LRP4O75096 1905 aa17.8■□□□□ 0.44
DDX56-207ENST00000448192 ADAMTS20P59510 1910 aa17.8■□□□□ 0.44
DDX56-207ENST00000448192 CELSR3Q9NYQ7 3312 aa17.8■□□□□ 0.44
DDX56-207ENST00000448192 CPED1A4D0V7 1026 aa17.79■□□□□ 0.44
DDX56-207ENST00000448192 TMEM110-MUSTN1A8MSY1 372 aa17.79■□□□□ 0.44
DDX56-207ENST00000448192 OPA1O60313 960 aa17.79■□□□□ 0.44
DDX56-207ENST00000448192 PROSCO94903 275 aa17.79■□□□□ 0.44
DDX56-207ENST00000448192 MT-CO3P00414 261 aa17.79■□□□□ 0.44
DDX56-207ENST00000448192 TPM1P09493 284 aa17.79■□□□□ 0.44
DDX56-207ENST00000448192 IL4RP24394 825 aa17.79■□□□□ 0.44
DDX56-207ENST00000448192 HTR1BP28222 390 aa17.79■□□□□ 0.44
DDX56-207ENST00000448192 MMP13P45452 471 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms