RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-208	ENST00000447995	TUSC3	Q13454	348 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	MTM1	Q13496	603 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	BMPR2	Q13873	1038 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	CRYM	Q14894	314 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	CHI3L2	Q15782	390 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	UGP2	Q16851	508 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	SYCP2L	Q5T4T6	812 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	ZNF618	Q5T7W0	954 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	ACBD5	Q5T8D3	534 aa	Predicted RBP	4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	C6orf163	Q5TEZ5	329 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	MROH9	Q5TGP6	573 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	OTUD1	Q5VV17	481 aa	Predicted RBP	4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	NAPEPLD	Q6IQ20	393 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	TIGD7	Q6NT04	549 aa	Predicted RBP	4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	DCLRE1A	Q6PJP8	1040 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	C17orf99	Q6UX52	265 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	PACS1	Q6VY07	963 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	C4orf50	Q6ZRC1	276 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	FAM43B	Q6ZT52	329 aa	Predicted RBP	4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	PAQR9	Q6ZVX9	377 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	ERMP1	Q7Z2K6	904 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	PRPF39	Q86UA1	669 aa	Known RBP	4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	MTDH	Q86UE4	582 aa	Known RBP	4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	SERINC5	Q86VE9	423 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	LONP2	Q86WA8	852 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	RASAL3	Q86YV0	1011 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	LRRC49	Q8IUZ0	686 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	WDR75	Q8IWA0	830 aa	Known RBP	4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	TMEFF1	Q8IYR6	380 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	PYROXD2	Q8N2H3	581 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	KIF2B	Q8N4N8	673 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	ZNF276	Q8N554	614 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	DNAAF3	Q8N9W5	541 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	ARRDC4	Q8NCT1	418 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	STKLD1	Q8NE28	680 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	FBXO27	Q8NI29	283 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	RNF34	Q969K3	372 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	MCUR1	Q96AQ8	359 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	SKA1	Q96BD8	255 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	ZNF669	Q96BR6	464 aa	Predicted RBP	4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	THOC1	Q96FV9	657 aa	Known RBP	4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	OXNAD1	Q96HP4	312 aa	Predicted RBP	4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	NSL1	Q96IY1	281 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	HHIPL1	Q96JK4	782 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	RHOV	Q96L33	236 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	CCDC74B	Q96LY2	380 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	TSNARE1	Q96NA8	513 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	GAD1	Q99259	594 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	LGMN	Q99538	433 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	SMO	Q99835	787 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	BTBD10	Q9BSF8	475 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	SLC13A1	Q9BZW2	595 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	SENP6	Q9GZR1	1112 aa	Predicted RBP	4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	IL22	Q9GZX6	179 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	OSBPL2	Q9H1P3	480 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	GBA3	Q9H227	469 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	WDCP	Q9H6R7	721 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	CATSPERB	Q9H7T0	1116 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	TLE6	Q9H808	572 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	CSNK1G1	Q9HCP0	422 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	CD248	Q9HCU0	757 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	WDR6	Q9NNW5	1121 aa	Known RBP	4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	DMAP1	Q9NPF5	467 aa	Predicted RBP	4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	CASS4	Q9NQ75	786 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	CRTAC1	Q9NQ79	661 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	XPNPEP3	Q9NQH7	507 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	PIGV	Q9NUD9	493 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	THAP1	Q9NVV9	213 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	DDIT4	Q9NX09	232 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	SYBU	Q9NX95	663 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	FLRT1	Q9NZU1	646 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	COX16	Q9P0S2	106 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	GGT7	Q9UJ14	662 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	HAO1	Q9UJM8	370 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	GJD2	Q9UKL4	321 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	VANGL2	Q9ULK5	521 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	APOBEC2	Q9Y235	224 aa	Known RBP	4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	ANKRD6	Q9Y2G4	727 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	AAR2	Q9Y312	384 aa	Known RBP	4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	SQOR	Q9Y6N5	450 aa		4.12	□□□□□ -1.75
PTPN12-208	ENST00000447995	PDCD11	Q14690	1871 aa	Known RBP	4.11	□□□□□ -1.75
PTPN12-208	ENST00000447995	SCN1A	P35498	2009 aa		4.11	□□□□□ -1.75
PTPN12-208	ENST00000447995		A0A0U1RQF3	1178 aa		4.11	□□□□□ -1.75
PTPN12-208	ENST00000447995	FAM237B	A0A1B0GVD1	139 aa		4.11	□□□□□ -1.75
PTPN12-208	ENST00000447995	MYBPHL	A2RUH7	354 aa		4.11	□□□□□ -1.75
PTPN12-208	ENST00000447995	ARHGAP42	A6NI28	874 aa		4.11	□□□□□ -1.75
PTPN12-208	ENST00000447995	YJEFN3	A6XGL0	299 aa		4.11	□□□□□ -1.75
PTPN12-208	ENST00000447995	TMEM114	B3SHH9	223 aa		4.11	□□□□□ -1.75
PTPN12-208	ENST00000447995		M0QZQ0	153 aa		4.11	□□□□□ -1.75
PTPN12-208	ENST00000447995	FCHO1	O14526	889 aa		4.11	□□□□□ -1.75
PTPN12-208	ENST00000447995	NRP1	O14786	923 aa		4.11	□□□□□ -1.75
PTPN12-208	ENST00000447995	HGS	O14964	777 aa	Predicted RBP	4.11	□□□□□ -1.75
PTPN12-208	ENST00000447995	SEPT4	O43236	478 aa		4.11	□□□□□ -1.75
PTPN12-208	ENST00000447995	PLIN3	O60664	434 aa		4.11	□□□□□ -1.75
PTPN12-208	ENST00000447995	SNN	O75324	88 aa	Predicted RBP	4.11	□□□□□ -1.75
PTPN12-208	ENST00000447995	CIB2	O75838	187 aa		4.11	□□□□□ -1.75
PTPN12-208	ENST00000447995	CABYR	O75952	493 aa		4.11	□□□□□ -1.75
PTPN12-208	ENST00000447995	NEBL	O76041	1014 aa		4.11	□□□□□ -1.75
PTPN12-208	ENST00000447995	BEST1	O76090	585 aa		4.11	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms