RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 ZNF567Q8N184 647 aa13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 SLC35B2Q8TB61 432 aa13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 SKA1Q96BD8 255 aa13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 IMP4Q96G21 291 aaKnown RBP13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 TDRD1Q9BXT4 1180 aaKnown RBP13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 ADGRE3Q9BY15 652 aa13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 RSPH14Q9UHP6 348 aa13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 A0A1B0GTW7 788 aa13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 CES2O00748 559 aa13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 CYP2A6P11509 494 aaPredicted RBP13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 MAT2AP31153 395 aaKnown RBP13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 ACTN2P35609 894 aa13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 RPL26P61254 145 aaKnown RBP13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 PPP2CBP62714 309 aa13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 PPP2CAP67775 309 aa13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 SKOR1P84550 965 aa13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 NIPAL4Q0D2K0 466 aa13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 SPEM2Q0P670 501 aa13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 SGCGQ13326 291 aa13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 PRPSAP1Q14558 356 aa13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 DUOXA1Q1HG43 343 aa13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 HS1BP3Q53T59 392 aa13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 LRRC73Q5JTD7 316 aa13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 CCDC70Q6NSX1 233 aa13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 C12orf50Q8NA57 414 aaPredicted RBP13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 LRRC45Q96CN5 670 aa13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 IFT43Q96FT9 208 aa13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 OSBPL9Q96SU4 736 aa13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 RBM15Q96T37 977 aaKnown RBP eCLIP13.17□□□□□ -0.31e-6■■■■□ 21.5
ERGIC3-209ENST00000447986 C1QTNF7Q9BXJ2 289 aa13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 NUSAP1Q9BXS6 441 aaKnown RBP13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 PCDH9Q9HC56 1237 aa13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 PCDH12Q9NPG4 1184 aa13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 DNPEPQ9ULA0 475 aa13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 SNX12Q9UMY4 172 aa13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 RPL26L1Q9UNX3 145 aaKnown RBP13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 ZNF148Q9UQR1 794 aa13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 R3HDM2Q9Y2K5 976 aaKnown RBP13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 THADAQ6YHU6 1953 aa13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 CTAGE9A4FU28 777 aa13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 GOLGA6CA6NDK9 693 aa13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 GOLGA6BA6NDN3 693 aa13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 PRAMEF26H0Y7S4 382 aa13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 KHNYNO15037 678 aaKnown RBP13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 BCAT2O15382 392 aaPredicted RBP13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 LIASO43766 372 aa13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 OPHN1O60890 802 aa13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 ANXA9O76027 345 aa13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 TM7SF2O76062 418 aa13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 CFIP05156 583 aa13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 ZNF806P0C7X5 589 aa13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 GOLGA6DP0CG33 693 aa13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 NFKB1P19838 968 aa13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 AFF3P51826 1226 aaKnown RBP13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 RACK1P63244 317 aaKnown RBP13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 TEAD4Q15561 434 aa13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 CSRP2Q16527 193 aa13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 CCNG2Q16589 344 aa13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 TMEM52BQ4KMG9 183 aa13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 PLA2G2CQ5R387 149 aa13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 ANKRD20A2Q5SQ80 823 aa13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 ANKRD20A1Q5TYW2 823 aa13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 ANKRD20A3Q5VUR7 823 aa13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 ARHGEF18Q6ZSZ5 1173 aa13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 ZSWIM9Q86XI8 627 aa13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 RASGEF1CQ8N431 466 aa13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 ZCCHC9Q8N567 271 aaKnown RBP13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 ATG4AQ8WYN0 398 aa13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 SERAC1Q96JX3 654 aa13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 NSMCE3Q96MG7 304 aa13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 SPATA13Q96N96 652 aa13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 FCRL5Q96RD9 977 aa13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 NAPGQ99747 312 aaPredicted RBP13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 TMEM121Q9BTD3 319 aa13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 SLC17A9Q9BYT1 436 aa13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 GBA3Q9H227 469 aa13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 C10orf88Q9H8K7 445 aa13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 SEMA4GQ9NTN9 838 aa13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 TMEM74BQ9NUR3 256 aa13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 GOLGA6AQ9NYA3 693 aa13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 FAM153AQ9UHL3 310 aa13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 METRNQ9UJH8 293 aa13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 CHKBQ9Y259 395 aa13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 ITM2BQ9Y287 266 aa13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 AAR2Q9Y312 384 aaKnown RBP13.16□□□□□ -0.3
ERGIC3-209ENST00000447986 C5orf60A6NFR6 353 aa13.15□□□□□ -0.3
ERGIC3-209ENST00000447986 PGRMC1O00264 195 aaKnown RBP13.15□□□□□ -0.3
ERGIC3-209ENST00000447986 MAP3K7O43318 606 aa13.15□□□□□ -0.3
ERGIC3-209ENST00000447986 FZD6O60353 706 aa13.15□□□□□ -0.3
ERGIC3-209ENST00000447986 MMP2P08253 660 aa13.15□□□□□ -0.3
ERGIC3-209ENST00000447986 HNRNPA2B1P22626 353 aaKnown RBP13.15□□□□□ -0.3
ERGIC3-209ENST00000447986 AKT2P31751 481 aa13.15□□□□□ -0.3
ERGIC3-209ENST00000447986 MMP12P39900 470 aa13.15□□□□□ -0.3
ERGIC3-209ENST00000447986 GRIA4P48058 902 aa13.15□□□□□ -0.3
ERGIC3-209ENST00000447986 MPP3Q13368 585 aa13.15□□□□□ -0.3
ERGIC3-209ENST00000447986 ARHGEF7Q14155 803 aa13.15□□□□□ -0.3
ERGIC3-209ENST00000447986 STAT4Q14765 748 aa13.15□□□□□ -0.3
ERGIC3-209ENST00000447986 PCSK7Q16549 785 aa13.15□□□□□ -0.3
ERGIC3-209ENST00000447986 TMEM259Q4ZIN3 620 aa13.15□□□□□ -0.3
ERGIC3-209ENST00000447986 TRIM61Q5EBN2 209 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms