RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 TXLNGYQ9BZA5 131 aa19.66■□□□□ 0.74
SGCE-207ENST00000447873 CD320Q9NPF0 282 aa19.66■□□□□ 0.74
SGCE-207ENST00000447873 PPM1HQ9ULR3 514 aa19.66■□□□□ 0.74
SGCE-207ENST00000447873 MYLKQ15746 1914 aa19.65■□□□□ 0.74
SGCE-207ENST00000447873 KANSL1LA0AUZ9 987 aa19.65■□□□□ 0.74
SGCE-207ENST00000447873 KPNA3O00505 521 aaPredicted RBP19.65■□□□□ 0.74
SGCE-207ENST00000447873 ADAM23O75077 832 aa19.65■□□□□ 0.74
SGCE-207ENST00000447873 IL1BP01584 269 aa19.65■□□□□ 0.74
SGCE-207ENST00000447873 CHRNB1P11230 501 aa19.65■□□□□ 0.74
SGCE-207ENST00000447873 SLC8A1P32418 973 aa19.65■□□□□ 0.74
SGCE-207ENST00000447873 POLR2LP62875 67 aaKnown RBP19.65■□□□□ 0.74
SGCE-207ENST00000447873 LRRC32Q14392 662 aa19.65■□□□□ 0.74
SGCE-207ENST00000447873 UBXN2BQ14CS0 331 aa19.65■□□□□ 0.74
SGCE-207ENST00000447873 QPCTQ16769 361 aa19.65■□□□□ 0.74
SGCE-207ENST00000447873 HSF5Q4G112 596 aaPredicted RBP19.65■□□□□ 0.74
SGCE-207ENST00000447873 ZNF805Q5CZA5 627 aa19.65■□□□□ 0.74
SGCE-207ENST00000447873 BRAT1Q6PJG6 821 aa19.65■□□□□ 0.74
SGCE-207ENST00000447873 MMAAQ8IVH4 418 aaKnown RBP19.65■□□□□ 0.74
SGCE-207ENST00000447873 SYNPOQ8N3V7 929 aa19.65■□□□□ 0.74
SGCE-207ENST00000447873 PIP4K2CQ8TBX8 421 aa19.65■□□□□ 0.74
SGCE-207ENST00000447873 BLOC1S5Q8TDH9 187 aa19.65■□□□□ 0.74
SGCE-207ENST00000447873 NELL2Q99435 816 aa19.65■□□□□ 0.74
SGCE-207ENST00000447873 EBNA1BP2Q99848 306 aaKnown RBP19.65■□□□□ 0.74
SGCE-207ENST00000447873 WDR83Q9BRX9 315 aaKnown RBP19.65■□□□□ 0.74
SGCE-207ENST00000447873 CDC42EP4Q9H3Q1 356 aaKnown RBP19.65■□□□□ 0.74
SGCE-207ENST00000447873 PHTF1Q9UMS5 762 aa19.65■□□□□ 0.74
SGCE-207ENST00000447873 C1QTNF3-AMACRE9PGA6 284 aa19.64■□□□□ 0.73
SGCE-207ENST00000447873 RNASEH1O60930 286 aaKnown RBP19.64■□□□□ 0.73
SGCE-207ENST00000447873 TARSP26639 723 aaKnown RBP19.64■□□□□ 0.73
SGCE-207ENST00000447873 KYNUQ16719 465 aa19.64■□□□□ 0.73
SGCE-207ENST00000447873 POM121L1PQ3SYA9 428 aa19.64■□□□□ 0.73
SGCE-207ENST00000447873 EOGTQ5NDL2 527 aa19.64■□□□□ 0.73
SGCE-207ENST00000447873 TRMT10CQ7L0Y3 403 aaKnown RBP19.64■□□□□ 0.73
SGCE-207ENST00000447873 ZSWIM9Q86XI8 627 aa19.64■□□□□ 0.73
SGCE-207ENST00000447873 IGDCC3Q8IVU1 814 aa19.64■□□□□ 0.73
SGCE-207ENST00000447873 PALM2Q8IXS6 379 aa19.64■□□□□ 0.73
SGCE-207ENST00000447873 PPHLN1Q8NEY8 458 aaKnown RBP19.64■□□□□ 0.73
SGCE-207ENST00000447873 HCAR2Q8TDS4 363 aa19.64■□□□□ 0.73
SGCE-207ENST00000447873 ANKRD7Q92527 254 aa19.64■□□□□ 0.73
SGCE-207ENST00000447873 SPOCK2Q92563 424 aa19.64■□□□□ 0.73
SGCE-207ENST00000447873 TTC25Q96NG3 672 aa19.64■□□□□ 0.73
SGCE-207ENST00000447873 NAT9Q9BTE0 207 aa19.64■□□□□ 0.73
SGCE-207ENST00000447873 SEMA4AQ9H3S1 761 aa19.64■□□□□ 0.73
SGCE-207ENST00000447873 LMAN1LQ9HAT1 526 aa19.64■□□□□ 0.73
SGCE-207ENST00000447873 LTB4R2Q9NPC1 389 aa19.64■□□□□ 0.73
SGCE-207ENST00000447873 ZC3H7BQ9UGR2 993 aaKnown RBP19.64■□□□□ 0.73
SGCE-207ENST00000447873 SARDHQ9UL12 918 aa19.64■□□□□ 0.73
SGCE-207ENST00000447873 MAGEB16A2A368 324 aa19.63■□□□□ 0.73
SGCE-207ENST00000447873 FAM170BA6NMN3 283 aa19.63■□□□□ 0.73
SGCE-207ENST00000447873 PIRTP0C851 137 aa19.63■□□□□ 0.73
SGCE-207ENST00000447873 CTPS1P17812 591 aa19.63■□□□□ 0.73
SGCE-207ENST00000447873 ADRA1DP25100 572 aa19.63■□□□□ 0.73
SGCE-207ENST00000447873 MSLNQ13421 630 aaPredicted RBP19.63■□□□□ 0.73
SGCE-207ENST00000447873 PCID2Q5JVF3 399 aa19.63■□□□□ 0.73
SGCE-207ENST00000447873 FAM46CQ5VWP2 391 aa19.63■□□□□ 0.73
SGCE-207ENST00000447873 CCNJLQ8IV13 435 aa19.63■□□□□ 0.73
SGCE-207ENST00000447873 ZNF687Q8N1G0 1237 aa19.63■□□□□ 0.73
SGCE-207ENST00000447873 UBLCP1Q8WVY7 318 aaPredicted RBP19.63■□□□□ 0.73
SGCE-207ENST00000447873 PPP1R16AQ96I34 528 aa19.63■□□□□ 0.73
SGCE-207ENST00000447873 NECAB3Q96P71 396 aaPredicted RBP19.63■□□□□ 0.73
SGCE-207ENST00000447873 RSPH9Q9H1X1 276 aaPredicted RBP19.63■□□□□ 0.73
SGCE-207ENST00000447873 NINJ2Q9NZG7 142 aa19.63■□□□□ 0.73
SGCE-207ENST00000447873 DKK3Q9UBP4 350 aa19.63■□□□□ 0.73
SGCE-207ENST00000447873 MTF2Q9Y483 593 aaPredicted RBP19.63■□□□□ 0.73
SGCE-207ENST00000447873 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.63■□□□□ 0.73
SGCE-207ENST00000447873 A0A0J9YYE9 177 aa19.62■□□□□ 0.73
SGCE-207ENST00000447873 TSPAN11A1L157 253 aa19.62■□□□□ 0.73
SGCE-207ENST00000447873 HEATR9A2RTY3 570 aa19.62■□□□□ 0.73
SGCE-207ENST00000447873 TRBC1P01850 177 aa19.62■□□□□ 0.73
SGCE-207ENST00000447873 PRKCGP05129 697 aa19.62■□□□□ 0.73
SGCE-207ENST00000447873 XPAP23025 273 aaPredicted RBP19.62■□□□□ 0.73
SGCE-207ENST00000447873 ABL2P42684 1182 aa19.62■□□□□ 0.73
SGCE-207ENST00000447873 PSMD8P48556 350 aa19.62■□□□□ 0.73
SGCE-207ENST00000447873 SEPT6Q14141 434 aa19.62■□□□□ 0.73
SGCE-207ENST00000447873 KIAA1211LQ6NV74 962 aa19.62■□□□□ 0.73
SGCE-207ENST00000447873 MREGQ8N565 214 aa19.62■□□□□ 0.73
SGCE-207ENST00000447873 OR2T3Q8NH03 318 aa19.62■□□□□ 0.73
SGCE-207ENST00000447873 BRSK1Q8TDC3 778 aa19.62■□□□□ 0.73
SGCE-207ENST00000447873 CFAP36Q96G28 342 aa19.62■□□□□ 0.73
SGCE-207ENST00000447873 SMIM14Q96QK8 99 aa19.62■□□□□ 0.73
SGCE-207ENST00000447873 FOXQ1Q9C009 403 aa19.62■□□□□ 0.73
SGCE-207ENST00000447873 PABPC3Q9H361 631 aaKnown RBP19.62■□□□□ 0.73
SGCE-207ENST00000447873 FBRSQ9HAH7 460 aa19.62■□□□□ 0.73
SGCE-207ENST00000447873 DYRK4Q9NR20 520 aa19.62■□□□□ 0.73
SGCE-207ENST00000447873 CHRAC1Q9NRG0 131 aa19.62■□□□□ 0.73
SGCE-207ENST00000447873 HACD3Q9P035 362 aa19.62■□□□□ 0.73
SGCE-207ENST00000447873 MMP17Q9ULZ9 603 aa19.62■□□□□ 0.73
SGCE-207ENST00000447873 A0A1W2PQF6 199 aa19.61■□□□□ 0.73
SGCE-207ENST00000447873 C16orf96A6NNT2 1141 aa19.61■□□□□ 0.73
SGCE-207ENST00000447873 STK25O00506 426 aa19.61■□□□□ 0.73
SGCE-207ENST00000447873 ACSL3O95573 720 aa19.61■□□□□ 0.73
SGCE-207ENST00000447873 TTC4O95801 387 aa19.61■□□□□ 0.73
SGCE-207ENST00000447873 ALPIP09923 528 aa19.61■□□□□ 0.73
SGCE-207ENST00000447873 PGAM1P18669 254 aa19.61■□□□□ 0.73
SGCE-207ENST00000447873 NFKBIAP25963 317 aa19.61■□□□□ 0.73
SGCE-207ENST00000447873 ITGB7P26010 798 aa19.61■□□□□ 0.73
SGCE-207ENST00000447873 SATB1Q01826 763 aa19.61■□□□□ 0.73
SGCE-207ENST00000447873 LAMB3Q13751 1172 aa19.61■□□□□ 0.73
SGCE-207ENST00000447873 UGP2Q16851 508 aa19.61■□□□□ 0.73
SGCE-207ENST00000447873 TJAP1Q5JTD0 557 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms