RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 USP30Q70CQ3 517 aa11.68□□□□□ -0.54
LINC00408-201ENST00000447784 ERN2Q76MJ5 926 aaKnown RBP11.68□□□□□ -0.54
LINC00408-201ENST00000447784 KDELC2Q7Z4H8 507 aa11.68□□□□□ -0.54
LINC00408-201ENST00000447784 MAATS1Q7Z4T9 603 aa11.68□□□□□ -0.54
LINC00408-201ENST00000447784 CTAGE6Q86UF2 777 aa11.68□□□□□ -0.54
LINC00408-201ENST00000447784 FAM124AQ86V42 546 aa11.68□□□□□ -0.54
LINC00408-201ENST00000447784 CTAGE4Q8IX94 777 aa11.68□□□□□ -0.54
LINC00408-201ENST00000447784 IPMKQ8NFU5 416 aa11.68□□□□□ -0.54
LINC00408-201ENST00000447784 SPATA22Q8NHS9 363 aa11.68□□□□□ -0.54
LINC00408-201ENST00000447784 HDAC8Q9BY41 377 aa11.68□□□□□ -0.54
LINC00408-201ENST00000447784 PCDH9Q9HC56 1237 aa11.68□□□□□ -0.54
LINC00408-201ENST00000447784 ITM2CQ9NQX7 267 aa11.68□□□□□ -0.54
LINC00408-201ENST00000447784 UBP1Q9NZI7 540 aa11.68□□□□□ -0.54
LINC00408-201ENST00000447784 USP36Q9P275 1121 aaKnown RBP11.68□□□□□ -0.54
LINC00408-201ENST00000447784 DKK3Q9UBP4 350 aa11.68□□□□□ -0.54
LINC00408-201ENST00000447784 FZD4Q9ULV1 537 aa11.68□□□□□ -0.54
LINC00408-201ENST00000447784 PCDHB9Q9Y5E1 797 aa11.68□□□□□ -0.54
LINC00408-201ENST00000447784 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.68□□□□□ -0.54
LINC00408-201ENST00000447784 FRYLO94915 3013 aa11.68□□□□□ -0.54
LINC00408-201ENST00000447784 PTPRZ1P23471 2315 aaPredicted RBP11.68□□□□□ -0.54
LINC00408-201ENST00000447784 RIF1Q5UIP0 2472 aaKnown RBP11.67□□□□□ -0.54
LINC00408-201ENST00000447784 FAM186AA6NE01 2351 aa11.67□□□□□ -0.54
LINC00408-201ENST00000447784 C16orf96A6NNT2 1141 aa11.67□□□□□ -0.54
LINC00408-201ENST00000447784 SLC7A4O43246 635 aa11.67□□□□□ -0.54
LINC00408-201ENST00000447784 NDUFS2O75306 463 aa11.67□□□□□ -0.54
LINC00408-201ENST00000447784 PGLSO95336 258 aa11.67□□□□□ -0.54
LINC00408-201ENST00000447784 METTL18O95568 372 aa11.67□□□□□ -0.54
LINC00408-201ENST00000447784 IGLV3-19P01714 112 aa11.67□□□□□ -0.54
LINC00408-201ENST00000447784 ETS1P14921 441 aa11.67□□□□□ -0.54
LINC00408-201ENST00000447784 HOXD12P35452 270 aa11.67□□□□□ -0.54
LINC00408-201ENST00000447784 ADCY8P40145 1251 aa11.67□□□□□ -0.54
LINC00408-201ENST00000447784 VPS41P49754 854 aa11.67□□□□□ -0.54
LINC00408-201ENST00000447784 TPMTP51580 245 aa11.67□□□□□ -0.54
LINC00408-201ENST00000447784 LIMK1P53667 647 aa11.67□□□□□ -0.54
LINC00408-201ENST00000447784 WNT3AP56704 352 aa11.67□□□□□ -0.54
LINC00408-201ENST00000447784 RPL26P61254 145 aaKnown RBP11.67□□□□□ -0.54
LINC00408-201ENST00000447784 BASP1P80723 227 aaKnown RBP11.67□□□□□ -0.54
LINC00408-201ENST00000447784 CREB5Q02930 508 aa11.67□□□□□ -0.54
LINC00408-201ENST00000447784 CDK18Q07002 472 aa11.67□□□□□ -0.54
LINC00408-201ENST00000447784 CNTN1Q12860 1018 aa11.67□□□□□ -0.54
LINC00408-201ENST00000447784 TRAF2Q12933 501 aa11.67□□□□□ -0.54
LINC00408-201ENST00000447784 GPS1Q13098 491 aa11.67□□□□□ -0.54
LINC00408-201ENST00000447784 RSPO4Q2I0M5 234 aaPredicted RBP11.67□□□□□ -0.54
LINC00408-201ENST00000447784 FAM182AQ5T1J6 154 aa11.67□□□□□ -0.54
LINC00408-201ENST00000447784 CYP2U1Q7Z449 544 aa11.67□□□□□ -0.54
LINC00408-201ENST00000447784 PRPF39Q86UA1 669 aaKnown RBP11.67□□□□□ -0.54
LINC00408-201ENST00000447784 FRMD1Q8N878 549 aa11.67□□□□□ -0.54
LINC00408-201ENST00000447784 LPCAT1Q8NF37 534 aa11.67□□□□□ -0.54
LINC00408-201ENST00000447784 NETO1Q8TDF5 533 aa11.67□□□□□ -0.54
LINC00408-201ENST00000447784 RAB7BQ96AH8 199 aa11.67□□□□□ -0.54
LINC00408-201ENST00000447784 ARRDC3Q96B67 414 aa11.67□□□□□ -0.54
LINC00408-201ENST00000447784 TDRD1Q9BXT4 1180 aaKnown RBP11.67□□□□□ -0.54
LINC00408-201ENST00000447784 BTBD1Q9H0C5 482 aa11.67□□□□□ -0.54
LINC00408-201ENST00000447784 ASIC3Q9UHC3 531 aa11.67□□□□□ -0.54
LINC00408-201ENST00000447784 PCYOX1Q9UHG3 505 aa11.67□□□□□ -0.54
LINC00408-201ENST00000447784 CDV3Q9UKY7 258 aaKnown RBP11.67□□□□□ -0.54
LINC00408-201ENST00000447784 CYP8B1Q9UNU6 501 aa11.67□□□□□ -0.54
LINC00408-201ENST00000447784 RPL26L1Q9UNX3 145 aaKnown RBP11.67□□□□□ -0.54
LINC00408-201ENST00000447784 CHKBQ9Y259 395 aa11.67□□□□□ -0.54
LINC00408-201ENST00000447784 GVINP1Q7Z2Y8 2422 aa11.66□□□□□ -0.54
LINC00408-201ENST00000447784 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.66□□□□□ -0.54
LINC00408-201ENST00000447784 FAM187AA6NFU0 413 aa11.66□□□□□ -0.54
LINC00408-201ENST00000447784 FAM47DPA6NHR8 397 aa11.66□□□□□ -0.54
LINC00408-201ENST00000447784 LRRC72A6NJI9 287 aa11.66□□□□□ -0.54
LINC00408-201ENST00000447784 ERI2A8K979 691 aaKnown RBP11.66□□□□□ -0.54
LINC00408-201ENST00000447784 HTRA2O43464 458 aaPredicted RBP11.66□□□□□ -0.54
LINC00408-201ENST00000447784 MT-CYBP00156 380 aaPredicted RBP11.66□□□□□ -0.54
LINC00408-201ENST00000447784 EPOP01588 193 aa11.66□□□□□ -0.54
LINC00408-201ENST00000447784 MMP2P08253 660 aa11.66□□□□□ -0.54
LINC00408-201ENST00000447784 ADRB3P13945 408 aa11.66□□□□□ -0.54
LINC00408-201ENST00000447784 CD6P30203 668 aa11.66□□□□□ -0.54
LINC00408-201ENST00000447784 DHPSP49366 369 aaPredicted RBP11.66□□□□□ -0.54
LINC00408-201ENST00000447784 FAM193AP78312 1265 aa11.66□□□□□ -0.54
LINC00408-201ENST00000447784 RPL6Q02878 288 aaKnown RBP11.66□□□□□ -0.54
LINC00408-201ENST00000447784 ELP6Q0PNE2 266 aa11.66□□□□□ -0.54
LINC00408-201ENST00000447784 SF3A2Q15428 464 aaKnown RBP11.66□□□□□ -0.54
LINC00408-201ENST00000447784 UGP2Q16851 508 aa11.66□□□□□ -0.54
LINC00408-201ENST00000447784 FAXCQ5TGI0 409 aa11.66□□□□□ -0.54
LINC00408-201ENST00000447784 PEAR1Q5VY43 1037 aaPredicted RBP11.66□□□□□ -0.54
LINC00408-201ENST00000447784 LYSMD4Q5XG99 296 aa11.66□□□□□ -0.54
LINC00408-201ENST00000447784 USP45Q70EL2 814 aa11.66□□□□□ -0.54
LINC00408-201ENST00000447784 PARS2Q7L3T8 475 aaKnown RBP11.66□□□□□ -0.54
LINC00408-201ENST00000447784 ERMP1Q7Z2K6 904 aa11.66□□□□□ -0.54
LINC00408-201ENST00000447784 ZNF572Q7Z3I7 529 aaPredicted RBP11.66□□□□□ -0.54
LINC00408-201ENST00000447784 PRUNE1Q86TP1 453 aa11.66□□□□□ -0.54
LINC00408-201ENST00000447784 LINC00523Q86TU6 105 aa11.66□□□□□ -0.54
LINC00408-201ENST00000447784 TMEFF1Q8IYR6 380 aa11.66□□□□□ -0.54
LINC00408-201ENST00000447784 AADATQ8N5Z0 425 aa11.66□□□□□ -0.54
LINC00408-201ENST00000447784 OR14C36Q8NHC7 312 aa11.66□□□□□ -0.54
LINC00408-201ENST00000447784 SLCO2A1Q92959 643 aa11.66□□□□□ -0.54
LINC00408-201ENST00000447784 OXNAD1Q96HP4 312 aaPredicted RBP11.66□□□□□ -0.54
LINC00408-201ENST00000447784 FEM1CQ96JP0 617 aa11.66□□□□□ -0.54
LINC00408-201ENST00000447784 RTKNQ9BST9 563 aa11.66□□□□□ -0.54
LINC00408-201ENST00000447784 FICDQ9BVA6 458 aa11.66□□□□□ -0.54
LINC00408-201ENST00000447784 NEUROG2Q9H2A3 272 aa11.66□□□□□ -0.54
LINC00408-201ENST00000447784 LRRC40Q9H9A6 602 aa11.66□□□□□ -0.54
LINC00408-201ENST00000447784 ETNK1Q9HBU6 452 aa11.66□□□□□ -0.54
LINC00408-201ENST00000447784 SGK2Q9HBY8 427 aa11.66□□□□□ -0.54
LINC00408-201ENST00000447784 PHTF1Q9UMS5 762 aa11.66□□□□□ -0.54
LINC00408-201ENST00000447784 MYOFQ9NZM1 2061 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms