RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 FIS1Q9Y3D6 152 aa19.21■□□□□ 0.67
SDCBP-204ENST00000447182 GPC4O75487 556 aa19.21■□□□□ 0.67
SDCBP-204ENST00000447182 F2P00734 622 aa19.21■□□□□ 0.67
SDCBP-204ENST00000447182 LTA4HP09960 611 aaKnown RBP19.21■□□□□ 0.67
SDCBP-204ENST00000447182 PPP1R3AQ16821 1122 aa19.21■□□□□ 0.67
SDCBP-204ENST00000447182 PPP4R4Q6NUP7 873 aa19.21■□□□□ 0.67
SDCBP-204ENST00000447182 RWDD4Q6NW29 188 aaKnown RBP19.21■□□□□ 0.67
SDCBP-204ENST00000447182 PTAR1Q7Z6K3 402 aaPredicted RBP19.21■□□□□ 0.67
SDCBP-204ENST00000447182 LZTR1Q8N653 840 aa19.21■□□□□ 0.67
SDCBP-204ENST00000447182 GAB3Q8WWW8 586 aa19.21■□□□□ 0.67
SDCBP-204ENST00000447182 SMARCD1Q96GM5 515 aa19.21■□□□□ 0.67
SDCBP-204ENST00000447182 CSNK1G1Q9HCP0 422 aa19.21■□□□□ 0.67
SDCBP-204ENST00000447182 ARMC1Q9NVT9 282 aa19.21■□□□□ 0.67
SDCBP-204ENST00000447182 ARHGEF38Q9NXL2 777 aa19.21■□□□□ 0.67
SDCBP-204ENST00000447182 GALNT8Q9NY28 637 aa19.21■□□□□ 0.67
SDCBP-204ENST00000447182 CNOT6Q9ULM6 557 aaKnown RBP19.21■□□□□ 0.67
SDCBP-204ENST00000447182 HTRA2O43464 458 aaPredicted RBP19.2■□□□□ 0.66
SDCBP-204ENST00000447182 SRP72O76094 671 aaKnown RBP19.2■□□□□ 0.66
SDCBP-204ENST00000447182 BMP2P12643 396 aa19.2■□□□□ 0.66
SDCBP-204ENST00000447182 HDCP19113 662 aa19.2■□□□□ 0.66
SDCBP-204ENST00000447182 HOXC13P31276 330 aa19.2■□□□□ 0.66
SDCBP-204ENST00000447182 HTR7P34969 479 aa19.2■□□□□ 0.66
SDCBP-204ENST00000447182 CLCN5P51795 746 aa19.2■□□□□ 0.66
SDCBP-204ENST00000447182 ADAM17P78536 824 aa19.2■□□□□ 0.66
SDCBP-204ENST00000447182 ACAP2Q15057 778 aa19.2■□□□□ 0.66
SDCBP-204ENST00000447182 RBM20Q5T481 1227 aaKnown RBP19.2■□□□□ 0.66
SDCBP-204ENST00000447182 IQSEC1Q6DN90 963 aa19.2■□□□□ 0.66
SDCBP-204ENST00000447182 CALML6Q8TD86 181 aa19.2■□□□□ 0.66
SDCBP-204ENST00000447182 ROPN1LQ96C74 230 aa19.2■□□□□ 0.66
SDCBP-204ENST00000447182 UBXN10Q96LJ8 280 aa19.2■□□□□ 0.66
SDCBP-204ENST00000447182 OLFM1Q99784 485 aa19.2■□□□□ 0.66
SDCBP-204ENST00000447182 RHOBTB2Q9BYZ6 727 aa19.2■□□□□ 0.66
SDCBP-204ENST00000447182 CYP4F12Q9HCS2 524 aa19.2■□□□□ 0.66
SDCBP-204ENST00000447182 CDH9Q9ULB4 789 aa19.2■□□□□ 0.66
SDCBP-204ENST00000447182 HSPA8P11142 646 aaKnown RBP19.19■□□□□ 0.66
SDCBP-204ENST00000447182 LEPRP48357 1165 aaKnown RBP19.19■□□□□ 0.66
SDCBP-204ENST00000447182 EIF4EBP2Q13542 120 aaPredicted RBP19.19■□□□□ 0.66
SDCBP-204ENST00000447182 NHSL2Q5HYW2 709 aa19.19■□□□□ 0.66
SDCBP-204ENST00000447182 KRT80Q6KB66 452 aa19.19■□□□□ 0.66
SDCBP-204ENST00000447182 ZNF280DQ6N043 979 aa19.19■□□□□ 0.66
SDCBP-204ENST00000447182 LARP4Q71RC2 724 aaKnown RBP eCLIP19.19■□□□□ 0.66
SDCBP-204ENST00000447182 GALNT7Q86SF2 657 aa19.19■□□□□ 0.66
SDCBP-204ENST00000447182 SCML4Q8N228 414 aa19.19■□□□□ 0.66
SDCBP-204ENST00000447182 RNF34Q969K3 372 aa19.19■□□□□ 0.66
SDCBP-204ENST00000447182 TSPAN17Q96FV3 270 aa19.19■□□□□ 0.66
SDCBP-204ENST00000447182 RMND5BQ96G75 393 aaPredicted RBP19.19■□□□□ 0.66
SDCBP-204ENST00000447182 MRGPRX2Q96LB1 330 aa19.19■□□□□ 0.66
SDCBP-204ENST00000447182 FSD1LQ9BXM9 530 aa19.19■□□□□ 0.66
SDCBP-204ENST00000447182 TSPYL2Q9H2G4 693 aaPredicted RBP19.19■□□□□ 0.66
SDCBP-204ENST00000447182 ABHD16BQ9H3Z7 469 aa19.19■□□□□ 0.66
SDCBP-204ENST00000447182 TRAF6Q9Y4K3 522 aa19.19■□□□□ 0.66
SDCBP-204ENST00000447182 AURKAO14965 403 aa19.19■□□□□ 0.66
SDCBP-204ENST00000447182 IGLV3-25P01717 112 aa19.19■□□□□ 0.66
SDCBP-204ENST00000447182 PYGLP06737 847 aa19.19■□□□□ 0.66
SDCBP-204ENST00000447182 DCTN2Q13561 401 aaKnown RBP19.19■□□□□ 0.66
SDCBP-204ENST00000447182 CYHR1Q6ZMK1 362 aa19.19■□□□□ 0.66
SDCBP-204ENST00000447182 DHFR2Q86XF0 187 aa19.19■□□□□ 0.66
SDCBP-204ENST00000447182 MYO1HQ8N1T3 1032 aa19.19■□□□□ 0.66
SDCBP-204ENST00000447182 DQX1Q8TE96 717 aaKnown RBP19.19■□□□□ 0.66
SDCBP-204ENST00000447182 GFM2Q969S9 779 aaKnown RBP19.19■□□□□ 0.66
SDCBP-204ENST00000447182 CIB1Q99828 191 aa19.19■□□□□ 0.66
SDCBP-204ENST00000447182 UPF3AQ9H1J1 476 aaKnown RBP19.19■□□□□ 0.66
SDCBP-204ENST00000447182 GSTO2Q9H4Y5 243 aa19.19■□□□□ 0.66
SDCBP-204ENST00000447182 NOL11Q9H8H0 719 aaKnown RBP19.19■□□□□ 0.66
SDCBP-204ENST00000447182 DUS2Q9NX74 493 aaKnown RBP19.19■□□□□ 0.66
SDCBP-204ENST00000447182 FGF10O15520 208 aaPredicted RBP19.18■□□□□ 0.66
SDCBP-204ENST00000447182 BMP10O95393 424 aa19.18■□□□□ 0.66
SDCBP-204ENST00000447182 HLA-DQB2P05538 268 aa19.18■□□□□ 0.66
SDCBP-204ENST00000447182 ARSAP15289 507 aa19.18■□□□□ 0.66
SDCBP-204ENST00000447182 IMPDH1P20839 514 aa19.18■□□□□ 0.66
SDCBP-204ENST00000447182 FGFR3P22607 806 aa19.18■□□□□ 0.66
SDCBP-204ENST00000447182 EPHX2P34913 555 aa19.18■□□□□ 0.66
SDCBP-204ENST00000447182 EMP3P54852 163 aa19.18■□□□□ 0.66
SDCBP-204ENST00000447182 CYP2R1Q6VVX0 501 aa19.18■□□□□ 0.66
SDCBP-204ENST00000447182 ZBTB49Q6ZSB9 765 aa19.18■□□□□ 0.66
SDCBP-204ENST00000447182 PACRGLQ8N7B6 248 aa19.18■□□□□ 0.66
SDCBP-204ENST00000447182 OR2T34Q8NGX1 318 aa19.18■□□□□ 0.66
SDCBP-204ENST00000447182 OR2T3Q8NH03 318 aa19.18■□□□□ 0.66
SDCBP-204ENST00000447182 GABPB2Q8TAK5 448 aaPredicted RBP19.18■□□□□ 0.66
SDCBP-204ENST00000447182 ZUFSPQ96AP4 578 aa19.18■□□□□ 0.66
SDCBP-204ENST00000447182 ZNF512Q96ME7 567 aaPredicted RBP19.18■□□□□ 0.66
SDCBP-204ENST00000447182 ZFP42Q96MM3 310 aa19.18■□□□□ 0.66
SDCBP-204ENST00000447182 CLK4Q9HAZ1 481 aaKnown RBP19.18■□□□□ 0.66
SDCBP-204ENST00000447182 ARNT2Q9HBZ2 717 aa19.18■□□□□ 0.66
SDCBP-204ENST00000447182 TBC1D13Q9NVG8 400 aa19.18■□□□□ 0.66
SDCBP-204ENST00000447182 SLC8A2Q9UPR5 921 aa19.18■□□□□ 0.66
SDCBP-204ENST00000447182 MTF2Q9Y483 593 aaPredicted RBP19.18■□□□□ 0.66
SDCBP-204ENST00000447182 BPTFQ12830 3046 aa19.18■□□□□ 0.66
SDCBP-204ENST00000447182 BBIP1A8MTZ0 92 aa19.18■□□□□ 0.66
SDCBP-204ENST00000447182 PMPCBO75439 489 aa19.18■□□□□ 0.66
SDCBP-204ENST00000447182 STAMBPO95630 424 aa19.18■□□□□ 0.66
SDCBP-204ENST00000447182 CCDC166P0CW27 439 aa19.18■□□□□ 0.66
SDCBP-204ENST00000447182 MANEALQ5VSG8 457 aa19.18■□□□□ 0.66
SDCBP-204ENST00000447182 OLFML2BQ68BL8 750 aa19.18■□□□□ 0.66
SDCBP-204ENST00000447182 TIGD7Q6NT04 549 aaPredicted RBP19.18■□□□□ 0.66
SDCBP-204ENST00000447182 BEND5Q7L4P6 421 aa19.18■□□□□ 0.66
SDCBP-204ENST00000447182 ERMP1Q7Z2K6 904 aa19.18■□□□□ 0.66
SDCBP-204ENST00000447182 TFAP2CQ92754 450 aa19.18■□□□□ 0.66
SDCBP-204ENST00000447182 L3HYPDHQ96EM0 354 aa19.18■□□□□ 0.66
SDCBP-204ENST00000447182 BIRC8Q96P09 236 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms