RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 Q6ZNB5 142 aa17.55■□□□□ 0.4
SMC6-206ENST00000446852 ITIH5Q86UX2 942 aa17.55■□□□□ 0.4
SMC6-206ENST00000446852 WDR75Q8IWA0 830 aaKnown RBP17.55■□□□□ 0.4
SMC6-206ENST00000446852 OR13C4Q8NGS5 318 aa17.55■□□□□ 0.4
SMC6-206ENST00000446852 RDH11Q8TC12 318 aa17.55■□□□□ 0.4
SMC6-206ENST00000446852 PPP4R1Q8TF05 950 aa17.55■□□□□ 0.4
SMC6-206ENST00000446852 STYXQ8WUJ0 223 aa17.55■□□□□ 0.4
SMC6-206ENST00000446852 TSNARE1Q96NA8 513 aa17.55■□□□□ 0.4
SMC6-206ENST00000446852 ACSS2Q9NR19 701 aa17.55■□□□□ 0.4
SMC6-206ENST00000446852 LNPEPQ9UIQ6 1025 aa17.55■□□□□ 0.4
SMC6-206ENST00000446852 STK38LQ9Y2H1 464 aa17.55■□□□□ 0.4
SMC6-206ENST00000446852 CHD7Q9P2D1 2997 aa17.55■□□□□ 0.4
SMC6-206ENST00000446852 GFRA2O00451 464 aa17.55■□□□□ 0.4
SMC6-206ENST00000446852 TRAFD1O14545 582 aaPredicted RBP17.55■□□□□ 0.4
SMC6-206ENST00000446852 TRIM13O60858 407 aa17.55■□□□□ 0.4
SMC6-206ENST00000446852 CTSAP10619 480 aa17.55■□□□□ 0.4
SMC6-206ENST00000446852 HDCP19113 662 aa17.55■□□□□ 0.4
SMC6-206ENST00000446852 MZF1P28698 734 aaPredicted RBP17.55■□□□□ 0.4
SMC6-206ENST00000446852 TUBB3Q13509 450 aa17.55■□□□□ 0.4
SMC6-206ENST00000446852 SLC14A2Q15849 920 aa17.55■□□□□ 0.4
SMC6-206ENST00000446852 FAM91A1Q658Y4 838 aa17.55■□□□□ 0.4
SMC6-206ENST00000446852 CARNMT1Q8N4J0 409 aa17.55■□□□□ 0.4
SMC6-206ENST00000446852 TTC16Q8NEE8 873 aa17.55■□□□□ 0.4
SMC6-206ENST00000446852 BRSK1Q8TDC3 778 aa17.55■□□□□ 0.4
SMC6-206ENST00000446852 SCYL1Q96KG9 808 aa17.55■□□□□ 0.4
SMC6-206ENST00000446852 GATA5Q9BWX5 397 aaPredicted RBP17.55■□□□□ 0.4
SMC6-206ENST00000446852 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.55■□□□□ 0.4
SMC6-206ENST00000446852 XPR1Q9UBH6 696 aa17.55■□□□□ 0.4
SMC6-206ENST00000446852 MAFFQ9ULX9 164 aa17.55■□□□□ 0.4
SMC6-206ENST00000446852 SPO11Q9Y5K1 396 aa17.55■□□□□ 0.4
SMC6-206ENST00000446852 HELZP42694 1942 aaKnown RBP17.54■□□□□ 0.4
SMC6-206ENST00000446852 CARNS1A5YM72 827 aa17.54■□□□□ 0.4
SMC6-206ENST00000446852 A8MUI8 341 aa17.54■□□□□ 0.4
SMC6-206ENST00000446852 ZNF195O14628 629 aa17.54■□□□□ 0.4
SMC6-206ENST00000446852 KLHL2O95198 593 aa17.54■□□□□ 0.4
SMC6-206ENST00000446852 LATS1O95835 1130 aa17.54■□□□□ 0.4
SMC6-206ENST00000446852 S1PR4O95977 384 aa17.54■□□□□ 0.4
SMC6-206ENST00000446852 DNAJB1P25685 340 aa17.54■□□□□ 0.4
SMC6-206ENST00000446852 GABRR2P28476 465 aa17.54■□□□□ 0.4
SMC6-206ENST00000446852 CLCN5P51795 746 aa17.54■□□□□ 0.4
SMC6-206ENST00000446852 GALNT7Q86SF2 657 aa17.54■□□□□ 0.4
SMC6-206ENST00000446852 WFDC5Q8TCV5 224 aa17.54■□□□□ 0.4
SMC6-206ENST00000446852 SMIM14Q96QK8 99 aa17.54■□□□□ 0.4
SMC6-206ENST00000446852 SIKE1Q9BRV8 207 aa17.54■□□□□ 0.4
SMC6-206ENST00000446852 TDRD1Q9BXT4 1180 aaKnown RBP17.54■□□□□ 0.4
SMC6-206ENST00000446852 SCUBE2Q9NQ36 999 aa17.54■□□□□ 0.4
SMC6-206ENST00000446852 GBF1Q92538 1859 aa17.54■□□□□ 0.4
SMC6-206ENST00000446852 H0Y626 953 aa17.54■□□□□ 0.4
SMC6-206ENST00000446852 ZMPSTE24O75844 475 aa17.54■□□□□ 0.4
SMC6-206ENST00000446852 PRLP01236 227 aa17.54■□□□□ 0.4
SMC6-206ENST00000446852 PABPC1LQ4VXU2 614 aaKnown RBP17.54■□□□□ 0.4
SMC6-206ENST00000446852 TREML1Q86YW5 311 aa17.54■□□□□ 0.4
SMC6-206ENST00000446852 TMC8Q8IU68 726 aa17.54■□□□□ 0.4
SMC6-206ENST00000446852 GPR65Q8IYL9 337 aa17.54■□□□□ 0.4
SMC6-206ENST00000446852 HS6ST3Q8IZP7 471 aa17.54■□□□□ 0.4
SMC6-206ENST00000446852 ZNF781Q8N8C0 355 aa17.54■□□□□ 0.4
SMC6-206ENST00000446852 BHMTQ93088 406 aa17.54■□□□□ 0.4
SMC6-206ENST00000446852 TBC1D10AQ9BXI6 508 aa17.54■□□□□ 0.4
SMC6-206ENST00000446852 MID2Q9UJV3 735 aa17.54■□□□□ 0.4
SMC6-206ENST00000446852 CCDC162PA2VCL2 907 aa17.53■□□□□ 0.4
SMC6-206ENST00000446852 ZBBXA8MT70 800 aa17.53■□□□□ 0.4
SMC6-206ENST00000446852 TMEM114B3SHH9 223 aa17.53■□□□□ 0.4
SMC6-206ENST00000446852 GOT2P00505 430 aaKnown RBP17.53■□□□□ 0.4
SMC6-206ENST00000446852 PDHA1P08559 390 aa17.53■□□□□ 0.4
SMC6-206ENST00000446852 SLC12A2P55011 1212 aa17.53■□□□□ 0.4
SMC6-206ENST00000446852 KRT72Q14CN4 511 aa17.53■□□□□ 0.4
SMC6-206ENST00000446852 HJURPQ8NCD3 748 aaPredicted RBP17.53■□□□□ 0.4
SMC6-206ENST00000446852 GABPB2Q8TAK5 448 aaPredicted RBP17.53■□□□□ 0.4
SMC6-206ENST00000446852 HEXDCQ8WVB3 486 aa17.53■□□□□ 0.4
SMC6-206ENST00000446852 PEX13Q92968 403 aa17.53■□□□□ 0.4
SMC6-206ENST00000446852 RILPQ96NA2 401 aa17.53■□□□□ 0.4
SMC6-206ENST00000446852 LRRC3Q9BY71 257 aa17.53■□□□□ 0.4
SMC6-206ENST00000446852 IL23AQ9NPF7 189 aa17.53■□□□□ 0.4
SMC6-206ENST00000446852 IGSF5Q9NSI5 407 aa17.53■□□□□ 0.4
SMC6-206ENST00000446852 MTCL1Q9Y4B5 1905 aaKnown RBP17.53■□□□□ 0.4
SMC6-206ENST00000446852 A0A087X1B8 175 aa17.53■□□□□ 0.4
SMC6-206ENST00000446852 CAPN14A8MX76 684 aa17.53■□□□□ 0.4
SMC6-206ENST00000446852 TMCC1O94876 653 aa17.53■□□□□ 0.4
SMC6-206ENST00000446852 ATP6V1G2O95670 118 aa17.53■□□□□ 0.4
SMC6-206ENST00000446852 HSPA4LO95757 839 aa17.53■□□□□ 0.4
SMC6-206ENST00000446852 ALOX15P16050 662 aaPredicted RBP17.53■□□□□ 0.4
SMC6-206ENST00000446852 PTPN4P29074 926 aa17.53■□□□□ 0.4
SMC6-206ENST00000446852 RASSF2P50749 326 aa17.53■□□□□ 0.4
SMC6-206ENST00000446852 CREMQ03060 361 aa17.53■□□□□ 0.4
SMC6-206ENST00000446852 SEMA3AQ14563 771 aa17.53■□□□□ 0.4
SMC6-206ENST00000446852 HECTD2Q5U5R9 776 aa17.53■□□□□ 0.4
SMC6-206ENST00000446852 LIPMQ5VYY2 423 aa17.53■□□□□ 0.4
SMC6-206ENST00000446852 NECAB2Q7Z6G3 386 aa17.53■□□□□ 0.4
SMC6-206ENST00000446852 MAB21L3Q8N8X9 362 aa17.53■□□□□ 0.4
SMC6-206ENST00000446852 KLHL23Q8NBE8 558 aa17.53■□□□□ 0.4
SMC6-206ENST00000446852 NSL1Q96IY1 281 aa17.53■□□□□ 0.4
SMC6-206ENST00000446852 NUDCD1Q96RS6 583 aa17.53■□□□□ 0.4
SMC6-206ENST00000446852 MIPEPQ99797 713 aa17.53■□□□□ 0.4
SMC6-206ENST00000446852 FEM1AQ9BSK4 669 aa17.53■□□□□ 0.4
SMC6-206ENST00000446852 MTF2Q9Y483 593 aaPredicted RBP17.53■□□□□ 0.4
SMC6-206ENST00000446852 PCDHGC4Q9Y5F7 938 aa17.53■□□□□ 0.4
SMC6-206ENST00000446852 OR51B4Q9Y5P0 310 aa17.53■□□□□ 0.4
SMC6-206ENST00000446852 RPP40O75818 363 aaKnown RBP17.52■□□□□ 0.4
SMC6-206ENST00000446852 LUC7L3O95232 432 aaKnown RBP17.52■□□□□ 0.4
SMC6-206ENST00000446852 CCR10P46092 362 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms