RNA–Protein interactions for RNA: ENST00000445329.5

TRIM6-205, Transcript of tripartite motif containing 6, human

TSL 1 (best) BASIC

Gene TRIM6, Length 2,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM6-205	ENST00000445329	ZNF248	Q8NDW4	579 aa		6.85	□□□□□ -1.31
TRIM6-205	ENST00000445329	CPT1B	Q92523	772 aa		6.85	□□□□□ -1.31
TRIM6-205	ENST00000445329	GTF3A	Q92664	365 aa	Known RBP	6.85	□□□□□ -1.31
TRIM6-205	ENST00000445329	UFD1	Q92890	307 aa		6.85	□□□□□ -1.31
TRIM6-205	ENST00000445329	CCDC124	Q96CT7	223 aa	Known RBP	6.85	□□□□□ -1.31
TRIM6-205	ENST00000445329	PWWP2A	Q96N64	755 aa		6.85	□□□□□ -1.31
TRIM6-205	ENST00000445329	LRRC19	Q9H756	370 aa		6.85	□□□□□ -1.31
TRIM6-205	ENST00000445329	GORASP2	Q9H8Y8	452 aa		6.85	□□□□□ -1.31
TRIM6-205	ENST00000445329	COPRS	Q9NQ92	184 aa		6.85	□□□□□ -1.31
TRIM6-205	ENST00000445329	GMPR2	Q9P2T1	348 aa	Known RBP	6.85	□□□□□ -1.31
TRIM6-205	ENST00000445329	SCML1	Q9UN30	329 aa		6.85	□□□□□ -1.31
TRIM6-205	ENST00000445329	ATF5	Q9Y2D1	282 aa	Predicted RBP	6.85	□□□□□ -1.31
TRIM6-205	ENST00000445329	NOP56	O00567	594 aa	Known RBP	6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	TRIM38	O00635	465 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	DCLK1	O15075	740 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	ZNF780A	O75290	641 aa	Predicted RBP	6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	ALB	P02768	609 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	GSN	P06396	782 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	GNG10	P50151	68 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	OVGP1	Q12889	678 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	GRB10	Q13322	594 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	CCNI	Q14094	377 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	CAPRIN1	Q14444	709 aa	Known RBP	6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	ABCB5	Q2M3G0	1257 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	PLEKHG4	Q58EX7	1191 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	KRBOX4	Q5JUW0	171 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	SYCE2	Q6PIF2	218 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	KIAA0408	Q6ZU52	694 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	C16orf62	Q7Z3J2	963 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	ZBTB33	Q86T24	672 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	DPP10	Q8N608	796 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	ZSWIM2	Q8NEG5	633 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	ABHD11	Q8NFV4	315 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	TSPEAR	Q8WU66	669 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	KLHL6	Q8WZ60	621 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	SYMPK	Q92797	1274 aa	Known RBP	6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	PTP4A1	Q93096	173 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	TWNK	Q96RR1	684 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	RMDN3	Q96TC7	470 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	EFHD1	Q9BUP0	239 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	UCK2	Q9BZX2	261 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	RACGAP1	Q9H0H5	632 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	AGPAT3	Q9NRZ7	376 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	EVA1B	Q9NVM1	165 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	ASH2L	Q9UBL3	628 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	PARP2	Q9UGN5	583 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	AGTPBP1	Q9UPW5	1226 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	ASB4	Q9Y574	426 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	CROCC	Q5TZA2	2017 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329		A0A087WXM4	84 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329		H0Y626	953 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	CCDC188	H7C350	402 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	MAGEB2	O15479	319 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	EIF1B	O60739	113 aa	Known RBP	6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	RGS20	O76081	388 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	BEST1	O76090	585 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	NDST3	O95803	873 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	GOT2	P00505	430 aa	Known RBP	6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	CALML3	P27482	149 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	EIF1	P41567	113 aa	Known RBP	6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	LEPR	P48357	1165 aa	Known RBP	6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	DIO1	P49895	249 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	EPHB1	P54762	984 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	WDR4	P57081	412 aa	Known RBP	6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	ZNF45	Q02386	682 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	RIN1	Q13671	783 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	FLOT2	Q14254	428 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	ZNF273	Q14593	569 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	TMEM132B	Q14DG7	1078 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	MANEA	Q5SRI9	462 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	MEI1	Q5TIA1	1274 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	LIMS2	Q7Z4I7	341 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	SH3RF1	Q7Z6J0	888 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	ASPG	Q86U10	573 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	RASGRP3	Q8IV61	690 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	ZFPM1	Q8IX07	1006 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	TAB3	Q8N5C8	712 aa	Predicted RBP	6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	UBL4B	Q8N7F7	174 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	NKAIN3	Q8N8D7	197 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	OR4M2	Q8NGB6	313 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	FBXO25	Q8TCJ0	367 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	ZNF507	Q8TCN5	953 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	HEXDC	Q8WVB3	486 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	CELF1	Q92879	486 aa	Known RBP	6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	CD101	Q93033	1021 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	COL26A1	Q96A83	441 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	EXOSC8	Q96B26	276 aa	Known RBP	6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	MRPL48	Q96GC5	212 aa	Known RBP	6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	ZBTB18	Q99592	522 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	DOK1	Q99704	481 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	VRK1	Q99986	396 aa	Predicted RBP	6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	PAPOLG	Q9BWT3	736 aa	Known RBP	6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	ARHGEF4	Q9NR80	690 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	UFSP2	Q9NUQ7	469 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	PLA2G4C	Q9UP65	541 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	PCDHGA7	Q9Y5G6	932 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	PFAS	O15067	1338 aa		6.84	□□□□□ -1.31
TRIM6-205	ENST00000445329	SNAP23	O00161	211 aa		6.84	□□□□□ -1.32
TRIM6-205	ENST00000445329	GPR171	O14626	319 aa		6.84	□□□□□ -1.32

Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms