RNA–Protein interactions for RNA: ENST00000444677.5

GARNL3-208, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-208ENST00000444677 LENG8Q96PV6 779 aaPredicted RBP13.63□□□□□ -0.23
GARNL3-208ENST00000444677 SEMA3CQ99985 751 aa13.63□□□□□ -0.23
GARNL3-208ENST00000444677 HERPUD2Q9BSE4 406 aa13.63□□□□□ -0.23
GARNL3-208ENST00000444677 CEP41Q9BYV8 373 aa13.63□□□□□ -0.23
GARNL3-208ENST00000444677 CNTNAP3Q9BZ76 1288 aa13.63□□□□□ -0.23
GARNL3-208ENST00000444677 SLC32A1Q9H598 525 aa13.63□□□□□ -0.23
GARNL3-208ENST00000444677 LUC7LQ9NQ29 371 aaKnown RBP13.63□□□□□ -0.23
GARNL3-208ENST00000444677 PCOLCE2Q9UKZ9 415 aa13.63□□□□□ -0.23
GARNL3-208ENST00000444677 ATP8A1Q9Y2Q0 1164 aa13.63□□□□□ -0.23
GARNL3-208ENST00000444677 ASCC3Q8N3C0 2202 aaKnown RBP13.63□□□□□ -0.23
GARNL3-208ENST00000444677 CHD5Q8TDI0 1954 aa13.62□□□□□ -0.23
GARNL3-208ENST00000444677 PLXNA2O75051 1894 aa13.62□□□□□ -0.23
GARNL3-208ENST00000444677 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.62□□□□□ -0.23
GARNL3-208ENST00000444677 GRID2IPA4D2P6 1211 aa13.62□□□□□ -0.23
GARNL3-208ENST00000444677 BTNL10A8MVZ5 291 aa13.62□□□□□ -0.23
GARNL3-208ENST00000444677 SDC3O75056 442 aa13.62□□□□□ -0.23
GARNL3-208ENST00000444677 TM7SF2O76062 418 aa13.62□□□□□ -0.23
GARNL3-208ENST00000444677 PDHA1P08559 390 aa13.62□□□□□ -0.23
GARNL3-208ENST00000444677 C6P13671 934 aa13.62□□□□□ -0.23
GARNL3-208ENST00000444677 CCNB1P14635 433 aa13.62□□□□□ -0.23
GARNL3-208ENST00000444677 PECAM1P16284 738 aaPredicted RBP13.62□□□□□ -0.23
GARNL3-208ENST00000444677 IGFALSP35858 605 aa13.62□□□□□ -0.23
GARNL3-208ENST00000444677 HSPA9P38646 679 aaKnown RBP13.62□□□□□ -0.23
GARNL3-208ENST00000444677 MMP12P39900 470 aa13.62□□□□□ -0.23
GARNL3-208ENST00000444677 LIG3P49916 1009 aa13.62□□□□□ -0.23
GARNL3-208ENST00000444677 SIM1P81133 766 aaPredicted RBP13.62□□□□□ -0.23
GARNL3-208ENST00000444677 RALGDSQ12967 914 aa13.62□□□□□ -0.23
GARNL3-208ENST00000444677 ODF2Q5BJF6 829 aa13.62□□□□□ -0.23
GARNL3-208ENST00000444677 ERAP2Q6P179 960 aa13.62□□□□□ -0.23
GARNL3-208ENST00000444677 NYAP1Q6ZVC0 841 aa13.62□□□□□ -0.23
GARNL3-208ENST00000444677 PTAR1Q7Z6K3 402 aaPredicted RBP13.62□□□□□ -0.23
GARNL3-208ENST00000444677 KIAA1328Q86T90 577 aa13.62□□□□□ -0.23
GARNL3-208ENST00000444677 VSIG1Q86XK7 387 aa13.62□□□□□ -0.23
GARNL3-208ENST00000444677 KATNAL2Q8IYT4 538 aa13.62□□□□□ -0.23
GARNL3-208ENST00000444677 PAF1Q8N7H5 531 aa13.62□□□□□ -0.23
GARNL3-208ENST00000444677 CNTD1Q8N815 330 aa13.62□□□□□ -0.23
GARNL3-208ENST00000444677 TP53I13Q8NBR0 393 aaPredicted RBP13.62□□□□□ -0.23
GARNL3-208ENST00000444677 SAP25Q8TEE9 199 aa13.62□□□□□ -0.23
GARNL3-208ENST00000444677 ASB12Q8WXK4 309 aa13.62□□□□□ -0.23
GARNL3-208ENST00000444677 HAUS1Q96CS2 278 aa13.62□□□□□ -0.23
GARNL3-208ENST00000444677 HDAC11Q96DB2 347 aa13.62□□□□□ -0.23
GARNL3-208ENST00000444677 HEMGNQ9BXL5 484 aa13.62□□□□□ -0.23
GARNL3-208ENST00000444677 B4GALT6Q9UBX8 382 aa13.62□□□□□ -0.23
GARNL3-208ENST00000444677 TTLL3Q9Y4R7 772 aa13.62□□□□□ -0.23
GARNL3-208ENST00000444677 PCDHB9Q9Y5E1 797 aa13.62□□□□□ -0.23
GARNL3-208ENST00000444677 PCDHGB2Q9Y5G2 931 aa13.62□□□□□ -0.23
GARNL3-208ENST00000444677 RAI2Q9Y5P3 530 aa13.62□□□□□ -0.23
GARNL3-208ENST00000444677 hCG_1818297A0A087WSY0 165 aa13.61□□□□□ -0.23
GARNL3-208ENST00000444677 MACROD2A1Z1Q3 448 aa13.61□□□□□ -0.23
GARNL3-208ENST00000444677 A6NNZ2 444 aa13.61□□□□□ -0.23
GARNL3-208ENST00000444677 FPGTO14772 594 aa13.61□□□□□ -0.23
GARNL3-208ENST00000444677 CST8O60676 142 aa13.61□□□□□ -0.23
GARNL3-208ENST00000444677 ZRANB2O95218 330 aaKnown RBP eCLIP13.61□□□□□ -0.23
GARNL3-208ENST00000444677 IPO7O95373 1038 aaKnown RBP13.61□□□□□ -0.23
GARNL3-208ENST00000444677 CPP00450 1065 aa13.61□□□□□ -0.23
GARNL3-208ENST00000444677 CTPS1P17812 591 aa13.61□□□□□ -0.23
GARNL3-208ENST00000444677 GM2AP17900 193 aa13.61□□□□□ -0.23
GARNL3-208ENST00000444677 MX2P20592 715 aa13.61□□□□□ -0.23
GARNL3-208ENST00000444677 EPHA8P29322 1005 aaPredicted RBP13.61□□□□□ -0.23
GARNL3-208ENST00000444677 SUOXP51687 545 aa13.61□□□□□ -0.23
GARNL3-208ENST00000444677 PPIDQ08752 370 aaKnown RBP13.61□□□□□ -0.23
GARNL3-208ENST00000444677 ELP6Q0PNE2 266 aa13.61□□□□□ -0.23
GARNL3-208ENST00000444677 AP1B1Q10567 949 aa13.61□□□□□ -0.23
GARNL3-208ENST00000444677 OVGP1Q12889 678 aa13.61□□□□□ -0.23
GARNL3-208ENST00000444677 TRIP6Q15654 476 aaKnown RBP13.61□□□□□ -0.23
GARNL3-208ENST00000444677 WSCD2Q2TBF2 565 aa13.61□□□□□ -0.23
GARNL3-208ENST00000444677 TIGD7Q6NT04 549 aaPredicted RBP13.61□□□□□ -0.23
GARNL3-208ENST00000444677 AADACL2Q6P093 401 aa13.61□□□□□ -0.23
GARNL3-208ENST00000444677 LIPIQ6XZB0 460 aa13.61□□□□□ -0.23
GARNL3-208ENST00000444677 KYAT3Q6YP21 454 aaKnown RBP13.61□□□□□ -0.23
GARNL3-208ENST00000444677 RCOR2Q8IZ40 523 aa13.61□□□□□ -0.23
GARNL3-208ENST00000444677 LRRC57Q8N9N7 239 aa13.61□□□□□ -0.23
GARNL3-208ENST00000444677 PIH1D2Q8WWB5 315 aa13.61□□□□□ -0.23
GARNL3-208ENST00000444677 OLFM3Q96PB7 478 aa13.61□□□□□ -0.23
GARNL3-208ENST00000444677 IL12RB2Q99665 862 aa13.61□□□□□ -0.23
GARNL3-208ENST00000444677 SEPT10Q9P0V9 454 aa13.61□□□□□ -0.23
GARNL3-208ENST00000444677 CNOT1A5YKK6 2376 aaKnown RBP13.6□□□□□ -0.23
GARNL3-208ENST00000444677 LZTS3O60299 673 aaPredicted RBP13.6□□□□□ -0.23
GARNL3-208ENST00000444677 PCDHGA12O60330 932 aa13.6□□□□□ -0.23
GARNL3-208ENST00000444677 FZD6O60353 706 aa13.6□□□□□ -0.23
GARNL3-208ENST00000444677 DFNA5O60443 496 aa13.6□□□□□ -0.23
GARNL3-208ENST00000444677 MAGEC1O60732 1142 aa13.6□□□□□ -0.23
GARNL3-208ENST00000444677 PGLSO95336 258 aa13.6□□□□□ -0.23
GARNL3-208ENST00000444677 PRLP01236 227 aa13.6□□□□□ -0.23
GARNL3-208ENST00000444677 ITGAVP06756 1048 aa13.6□□□□□ -0.23
GARNL3-208ENST00000444677 ZFXP17010 805 aaPredicted RBP13.6□□□□□ -0.23
GARNL3-208ENST00000444677 SPINK2P20155 84 aa13.6□□□□□ -0.23
GARNL3-208ENST00000444677 CTNNA1P35221 906 aaKnown RBP13.6□□□□□ -0.23
GARNL3-208ENST00000444677 RXRGP48443 463 aa13.6□□□□□ -0.23
GARNL3-208ENST00000444677 PEX5P50542 639 aa13.6□□□□□ -0.23
GARNL3-208ENST00000444677 PFN3P60673 137 aa13.6□□□□□ -0.23
GARNL3-208ENST00000444677 FZD2Q14332 565 aa13.6□□□□□ -0.23
GARNL3-208ENST00000444677 SUZ12Q15022 739 aaKnown RBP13.6□□□□□ -0.23
GARNL3-208ENST00000444677 IRF4Q15306 451 aa13.6□□□□□ -0.23
GARNL3-208ENST00000444677 ALG1LQ6GMV1 187 aa13.6□□□□□ -0.23
GARNL3-208ENST00000444677 DPPA4Q7L190 304 aa13.6□□□□□ -0.23
GARNL3-208ENST00000444677 KANSL1Q7Z3B3 1105 aa13.6□□□□□ -0.23
GARNL3-208ENST00000444677 SLCO6A1Q86UG4 719 aa13.6□□□□□ -0.23
GARNL3-208ENST00000444677 CCDC50Q8IVM0 306 aa13.6□□□□□ -0.23
GARNL3-208ENST00000444677 PELI3Q8N2H9 469 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms