RNA–Protein interactions for RNA: ENST00000444118.5

CCDC197-202, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,937 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-202ENST00000444118 TSPAN3O60637 253 aa17.34■□□□□ 0.37
CCDC197-202ENST00000444118 ZMPSTE24O75844 475 aa17.34■□□□□ 0.37
CCDC197-202ENST00000444118 KLHL2O95198 593 aa17.34■□□□□ 0.37
CCDC197-202ENST00000444118 CD160O95971 181 aa17.34■□□□□ 0.37
CCDC197-202ENST00000444118 KRT16P08779 473 aa17.34■□□□□ 0.37
CCDC197-202ENST00000444118 EN2P19622 333 aaPredicted RBP17.34■□□□□ 0.37
CCDC197-202ENST00000444118 PSMA3P25788 255 aa17.34■□□□□ 0.37
CCDC197-202ENST00000444118 HNRNPH1P31943 449 aaKnown RBP17.34■□□□□ 0.37
CCDC197-202ENST00000444118 PRKAA2P54646 552 aa17.34■□□□□ 0.37
CCDC197-202ENST00000444118 PRAMEP78395 509 aa17.34■□□□□ 0.37
CCDC197-202ENST00000444118 ZBTB16Q05516 673 aa17.34■□□□□ 0.37
CCDC197-202ENST00000444118 GALNT3Q14435 633 aa17.34■□□□□ 0.37
CCDC197-202ENST00000444118 CYTH1Q15438 398 aa17.34■□□□□ 0.37
CCDC197-202ENST00000444118 ZNF789Q5FWF6 425 aa17.34■□□□□ 0.37
CCDC197-202ENST00000444118 RNF219Q5W0B1 726 aaPredicted RBP17.34■□□□□ 0.37
CCDC197-202ENST00000444118 LILRA6Q6PI73 481 aa17.34■□□□□ 0.37
CCDC197-202ENST00000444118 GAREM2Q75VX8 874 aa17.34■□□□□ 0.37
CCDC197-202ENST00000444118 OTOP2Q7RTS6 562 aa17.34■□□□□ 0.37
CCDC197-202ENST00000444118 TMC8Q8IU68 726 aa17.34■□□□□ 0.37
CCDC197-202ENST00000444118 ARL14EPQ8N8R7 260 aaPredicted RBP17.34■□□□□ 0.37
CCDC197-202ENST00000444118 GPR150Q8NGU9 434 aa17.34■□□□□ 0.37
CCDC197-202ENST00000444118 PPP4R1Q8TF05 950 aa17.34■□□□□ 0.37
CCDC197-202ENST00000444118 HDAC10Q969S8 669 aa17.34■□□□□ 0.37
CCDC197-202ENST00000444118 ELMO2Q96JJ3 720 aa17.34■□□□□ 0.37
CCDC197-202ENST00000444118 NUDCD1Q96RS6 583 aa17.34■□□□□ 0.37
CCDC197-202ENST00000444118 TUBB6Q9BUF5 446 aa17.34■□□□□ 0.37
CCDC197-202ENST00000444118 TDRD1Q9BXT4 1180 aaKnown RBP17.34■□□□□ 0.37
CCDC197-202ENST00000444118 LRRC3Q9BY71 257 aa17.34■□□□□ 0.37
CCDC197-202ENST00000444118 NMUR2Q9GZQ4 415 aa17.34■□□□□ 0.37
CCDC197-202ENST00000444118 TRPC7Q9HCX4 862 aa17.34■□□□□ 0.37
CCDC197-202ENST00000444118 CBX4O00257 560 aa17.33■□□□□ 0.37
CCDC197-202ENST00000444118 FCHO1O14526 889 aa17.33■□□□□ 0.37
CCDC197-202ENST00000444118 KITP10721 976 aa17.33■□□□□ 0.37
CCDC197-202ENST00000444118 HDCP19113 662 aa17.33■□□□□ 0.37
CCDC197-202ENST00000444118 SAT1P21673 171 aa17.33■□□□□ 0.37
CCDC197-202ENST00000444118 AVPR1AP37288 418 aa17.33■□□□□ 0.37
CCDC197-202ENST00000444118 PGGT1BP53609 377 aa17.33■□□□□ 0.37
CCDC197-202ENST00000444118 RIPK1Q13546 671 aa17.33■□□□□ 0.37
CCDC197-202ENST00000444118 ZNF460Q14592 562 aa17.33■□□□□ 0.37
CCDC197-202ENST00000444118 RBM20Q5T481 1227 aaKnown RBP17.33■□□□□ 0.37
CCDC197-202ENST00000444118 TXNDC8Q6A555 127 aa17.33■□□□□ 0.37
CCDC197-202ENST00000444118 LRRC8EQ6NSJ5 796 aa17.33■□□□□ 0.37
CCDC197-202ENST00000444118 NAPRTQ6XQN6 538 aa17.33■□□□□ 0.37
CCDC197-202ENST00000444118 C16orf59Q7L2K0 433 aa17.33■□□□□ 0.37
CCDC197-202ENST00000444118 TTC7BQ86TV6 843 aa17.33■□□□□ 0.37
CCDC197-202ENST00000444118 ALYREFQ86V81 257 aaKnown RBP17.33■□□□□ 0.37
CCDC197-202ENST00000444118 FSTL5Q8N475 847 aaPredicted RBP17.33■□□□□ 0.37
CCDC197-202ENST00000444118 GPATCH11Q8N954 259 aa17.33■□□□□ 0.37
CCDC197-202ENST00000444118 BLOC1S5Q8TDH9 187 aa17.33■□□□□ 0.37
CCDC197-202ENST00000444118 PTCD3Q96EY7 689 aaKnown RBP17.33■□□□□ 0.37
CCDC197-202ENST00000444118 PRR11Q96HE9 360 aaPredicted RBP17.33■□□□□ 0.37
CCDC197-202ENST00000444118 MUC3BQ9H195 1237 aa17.33■□□□□ 0.37
CCDC197-202ENST00000444118 KCTD3Q9Y597 815 aa17.33■□□□□ 0.37
CCDC197-202ENST00000444118 OR51B4Q9Y5P0 310 aa17.33■□□□□ 0.37
CCDC197-202ENST00000444118 CPQQ9Y646 472 aa17.33■□□□□ 0.37
CCDC197-202ENST00000444118 LUC7L3O95232 432 aaKnown RBP17.33■□□□□ 0.36
CCDC197-202ENST00000444118 WISP3O95389 354 aaPredicted RBP17.33■□□□□ 0.36
CCDC197-202ENST00000444118 PRLP01236 227 aa17.33■□□□□ 0.36
CCDC197-202ENST00000444118 DLG1Q12959 904 aa17.33■□□□□ 0.36
CCDC197-202ENST00000444118 INO80DQ53TQ3 878 aaPredicted RBP17.33■□□□□ 0.36
CCDC197-202ENST00000444118 LIPMQ5VYY2 423 aa17.33■□□□□ 0.36
CCDC197-202ENST00000444118 PTAR1Q7Z6K3 402 aaPredicted RBP17.33■□□□□ 0.36
CCDC197-202ENST00000444118 CPSF2Q9P2I0 782 aaKnown RBP17.33■□□□□ 0.36
CCDC197-202ENST00000444118 ARL5AQ9Y689 179 aa17.33■□□□□ 0.36
CCDC197-202ENST00000444118 TYW5A2RUC4 315 aaKnown RBP17.32■□□□□ 0.36
CCDC197-202ENST00000444118 CAPN14A8MX76 684 aa17.32■□□□□ 0.36
CCDC197-202ENST00000444118 ZNF195O14628 629 aa17.32■□□□□ 0.36
CCDC197-202ENST00000444118 TBL1XO60907 577 aa17.32■□□□□ 0.36
CCDC197-202ENST00000444118 RPP40O75818 363 aaKnown RBP17.32■□□□□ 0.36
CCDC197-202ENST00000444118 S1PR4O95977 384 aa17.32■□□□□ 0.36
CCDC197-202ENST00000444118 GABRR2P28476 465 aa17.32■□□□□ 0.36
CCDC197-202ENST00000444118 SCNN1BP51168 640 aa17.32■□□□□ 0.36
CCDC197-202ENST00000444118 KPNA2P52292 529 aaKnown RBP17.32■□□□□ 0.36
CCDC197-202ENST00000444118 ZNF140P52738 457 aaPredicted RBP17.32■□□□□ 0.36
CCDC197-202ENST00000444118 SLC7A9P82251 487 aa17.32■□□□□ 0.36
CCDC197-202ENST00000444118 TUBB3Q13509 450 aa17.32■□□□□ 0.36
CCDC197-202ENST00000444118 FSCBQ5H9T9 825 aa17.32■□□□□ 0.36
CCDC197-202ENST00000444118 MAVSQ7Z434 540 aa17.32■□□□□ 0.36
CCDC197-202ENST00000444118 PARP9Q8IXQ6 854 aa17.32■□□□□ 0.36
CCDC197-202ENST00000444118 FIBCD1Q8N539 461 aa17.32■□□□□ 0.36
CCDC197-202ENST00000444118 OR6P1Q8NGX9 317 aa17.32■□□□□ 0.36
CCDC197-202ENST00000444118 UTP4Q969X6 686 aaKnown RBP17.32■□□□□ 0.36
CCDC197-202ENST00000444118 ALG14Q96F25 216 aa17.32■□□□□ 0.36
CCDC197-202ENST00000444118 TSPAN17Q96FV3 270 aa17.32■□□□□ 0.36
CCDC197-202ENST00000444118 DNAJC1Q96KC8 554 aaKnown RBP17.32■□□□□ 0.36
CCDC197-202ENST00000444118 EXOC2Q96KP1 924 aa17.32■□□□□ 0.36
CCDC197-202ENST00000444118 TBATAQ96M53 351 aa17.32■□□□□ 0.36
CCDC197-202ENST00000444118 OLFM1Q99784 485 aa17.32■□□□□ 0.36
CCDC197-202ENST00000444118 TLE6Q9H808 572 aa17.32■□□□□ 0.36
CCDC197-202ENST00000444118 SCUBE2Q9NQ36 999 aa17.32■□□□□ 0.36
CCDC197-202ENST00000444118 MARCH4Q9P2E8 410 aaPredicted RBP17.32■□□□□ 0.36
CCDC197-202ENST00000444118 DNMT3BQ9UBC3 853 aaKnown RBP17.32■□□□□ 0.36
CCDC197-202ENST00000444118 XPR1Q9UBH6 696 aa17.32■□□□□ 0.36
CCDC197-202ENST00000444118 CORO1CQ9ULV4 474 aaPredicted RBP17.32■□□□□ 0.36
CCDC197-202ENST00000444118 RUVBL2Q9Y230 463 aaKnown RBP17.32■□□□□ 0.36
CCDC197-202ENST00000444118 CCDC22O60826 627 aa17.31■□□□□ 0.36
CCDC197-202ENST00000444118 TMCC1O94876 653 aa17.31■□□□□ 0.36
CCDC197-202ENST00000444118 SERPINA6P08185 405 aa17.31■□□□□ 0.36
CCDC197-202ENST00000444118 SPATA31D3P0C874 917 aa17.31■□□□□ 0.36
CCDC197-202ENST00000444118 PTPN4P29074 926 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms