RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 MMP12P39900 470 aa20.22■□□□□ 0.83
LRCH3-208ENST00000443727 MMRN1Q13201 1228 aa20.22■□□□□ 0.83
LRCH3-208ENST00000443727 ZSWIM9Q86XI8 627 aa20.22■□□□□ 0.83
LRCH3-208ENST00000443727 PDCD7Q8N8D1 485 aaKnown RBP20.22■□□□□ 0.83
LRCH3-208ENST00000443727 TP53I13Q8NBR0 393 aaPredicted RBP20.22■□□□□ 0.83
LRCH3-208ENST00000443727 PDCD6IPQ8WUM4 868 aaKnown RBP20.22■□□□□ 0.83
LRCH3-208ENST00000443727 BTN2A2Q8WVV5 523 aa20.22■□□□□ 0.83
LRCH3-208ENST00000443727 SLC13A1Q9BZW2 595 aa20.22■□□□□ 0.83
LRCH3-208ENST00000443727 ABHD10Q9NUJ1 306 aa20.22■□□□□ 0.83
LRCH3-208ENST00000443727 GOLGA4Q13439 2230 aaKnown RBP20.22■□□□□ 0.83
LRCH3-208ENST00000443727 PTPRBP23467 1997 aa20.21■□□□□ 0.83
LRCH3-208ENST00000443727 SSU72P8A0A1W2PR75 194 aa20.21■□□□□ 0.83
LRCH3-208ENST00000443727 TTC24A2A3L6 582 aaPredicted RBP20.21■□□□□ 0.83
LRCH3-208ENST00000443727 TRABD2BA6NFA1 517 aa20.21■□□□□ 0.83
LRCH3-208ENST00000443727 K7ESM1 405 aa20.21■□□□□ 0.83
LRCH3-208ENST00000443727 AQP9O43315 295 aa20.21■□□□□ 0.83
LRCH3-208ENST00000443727 MAFKO60675 156 aa20.21■□□□□ 0.83
LRCH3-208ENST00000443727 KRT7P08729 469 aa20.21■□□□□ 0.83
LRCH3-208ENST00000443727 CD48P09326 243 aa20.21■□□□□ 0.83
LRCH3-208ENST00000443727 MMP13P45452 471 aa20.21■□□□□ 0.83
LRCH3-208ENST00000443727 CLDN6P56747 220 aa20.21■□□□□ 0.83
LRCH3-208ENST00000443727 E2F1Q01094 437 aa20.21■□□□□ 0.83
LRCH3-208ENST00000443727 EIF2B5Q13144 721 aaKnown RBP20.21■□□□□ 0.83
LRCH3-208ENST00000443727 WSCD2Q2TBF2 565 aa20.21■□□□□ 0.83
LRCH3-208ENST00000443727 FAXCQ5TGI0 409 aa20.21■□□□□ 0.83
LRCH3-208ENST00000443727 HES3Q5TGS1 186 aa20.21■□□□□ 0.83
LRCH3-208ENST00000443727 MARC1Q5VT66 337 aa20.21■□□□□ 0.83
LRCH3-208ENST00000443727 MAP7D3Q8IWC1 876 aa20.21■□□□□ 0.83
LRCH3-208ENST00000443727 MDM1Q8TC05 714 aa20.21■□□□□ 0.83
LRCH3-208ENST00000443727 APOLD1Q96LR9 279 aa20.21■□□□□ 0.83
LRCH3-208ENST00000443727 CCDC42Q96M95 316 aa20.21■□□□□ 0.83
LRCH3-208ENST00000443727 SPASTQ9UBP0 616 aa20.21■□□□□ 0.83
LRCH3-208ENST00000443727 APOBEC3BQ9UH17 382 aaKnown RBP20.21■□□□□ 0.83
LRCH3-208ENST00000443727 KLF15Q9UIH9 416 aa20.21■□□□□ 0.83
LRCH3-208ENST00000443727 CSNK1G3Q9Y6M4 447 aa20.21■□□□□ 0.83
LRCH3-208ENST00000443727 PCCBP05166 539 aa20.2■□□□□ 0.82
LRCH3-208ENST00000443727 TMEM253P0C7T8 217 aa20.2■□□□□ 0.82
LRCH3-208ENST00000443727 ELFN1P0C7U0 828 aa20.2■□□□□ 0.82
LRCH3-208ENST00000443727 HTR1BP28222 390 aa20.2■□□□□ 0.82
LRCH3-208ENST00000443727 DUSP3P51452 185 aaPredicted RBP20.2■□□□□ 0.82
LRCH3-208ENST00000443727 ADKP55263 362 aaKnown RBP20.2■□□□□ 0.82
LRCH3-208ENST00000443727 DPYSL3Q14195 570 aa20.2■□□□□ 0.82
LRCH3-208ENST00000443727 ATP13A4Q4VNC1 1196 aa20.2■□□□□ 0.82
LRCH3-208ENST00000443727 PRRT3Q5FWE3 981 aa20.2■□□□□ 0.82
LRCH3-208ENST00000443727 MACC1Q6ZN28 852 aa20.2■□□□□ 0.82
LRCH3-208ENST00000443727 PROSER1Q86XN7 944 aa20.2■□□□□ 0.82
LRCH3-208ENST00000443727 LRRC49Q8IUZ0 686 aa20.2■□□□□ 0.82
LRCH3-208ENST00000443727 PHACTR4Q8IZ21 702 aa20.2■□□□□ 0.82
LRCH3-208ENST00000443727 ECHDC3Q96DC8 303 aa20.2■□□□□ 0.82
LRCH3-208ENST00000443727 NUDCD1Q96RS6 583 aa20.2■□□□□ 0.82
LRCH3-208ENST00000443727 IL12RB2Q99665 862 aa20.2■□□□□ 0.82
LRCH3-208ENST00000443727 TDRD6O60522 2096 aaKnown RBP20.2■□□□□ 0.82
LRCH3-208ENST00000443727 ARID1BQ8NFD5 2236 aaPredicted RBP20.19■□□□□ 0.82
LRCH3-208ENST00000443727 A8MX80 341 aa20.19■□□□□ 0.82
LRCH3-208ENST00000443727 TRAFD1O14545 582 aaPredicted RBP20.19■□□□□ 0.82
LRCH3-208ENST00000443727 MFAP3LO75121 409 aa20.19■□□□□ 0.82
LRCH3-208ENST00000443727 PEX11BO96011 259 aa20.19■□□□□ 0.82
LRCH3-208ENST00000443727 CKMT1AP12532 417 aa20.19■□□□□ 0.82
LRCH3-208ENST00000443727 IL4RP24394 825 aa20.19■□□□□ 0.82
LRCH3-208ENST00000443727 NFKBIAP25963 317 aa20.19■□□□□ 0.82
LRCH3-208ENST00000443727 PPARDQ03181 441 aa20.19■□□□□ 0.82
LRCH3-208ENST00000443727 ITKQ08881 620 aa20.19■□□□□ 0.82
LRCH3-208ENST00000443727 INPP5AQ14642 412 aa20.19■□□□□ 0.82
LRCH3-208ENST00000443727 MESDQ14696 234 aa20.19■□□□□ 0.82
LRCH3-208ENST00000443727 PDK2Q15119 407 aa20.19■□□□□ 0.82
LRCH3-208ENST00000443727 ASTE1Q2TB18 679 aaPredicted RBP20.19■□□□□ 0.82
LRCH3-208ENST00000443727 DEFB133Q30KQ1 61 aa20.19■□□□□ 0.82
LRCH3-208ENST00000443727 ANKRD20A8PQ5CZ79 823 aa20.19■□□□□ 0.82
LRCH3-208ENST00000443727 ZCCHC8Q6NZY4 707 aaKnown RBP20.19■□□□□ 0.82
LRCH3-208ENST00000443727 CPNE8Q86YQ8 564 aa20.19■□□□□ 0.82
LRCH3-208ENST00000443727 RBFAQ8N0V3 343 aa20.19■□□□□ 0.82
LRCH3-208ENST00000443727 FAM71BQ8TC56 605 aa20.19■□□□□ 0.82
LRCH3-208ENST00000443727 NHEJ1Q9H9Q4 299 aaPredicted RBP20.19■□□□□ 0.82
LRCH3-208ENST00000443727 USP29Q9HBJ7 922 aa20.19■□□□□ 0.82
LRCH3-208ENST00000443727 NOD2Q9HC29 1040 aa20.19■□□□□ 0.82
LRCH3-208ENST00000443727 NCKIPSDQ9NZQ3 722 aa20.19■□□□□ 0.82
LRCH3-208ENST00000443727 PCDHGC4Q9Y5F7 938 aa20.19■□□□□ 0.82
LRCH3-208ENST00000443727 PLXNB3Q9ULL4 1909 aa20.19■□□□□ 0.82
LRCH3-208ENST00000443727 A0A1W2PQ67 120 aa20.18■□□□□ 0.82
LRCH3-208ENST00000443727 CFAP69A5D8W1 941 aa20.18■□□□□ 0.82
LRCH3-208ENST00000443727 SOCS5O75159 536 aa20.18■□□□□ 0.82
LRCH3-208ENST00000443727 RECQL5O94762 991 aaPredicted RBP20.18■□□□□ 0.82
LRCH3-208ENST00000443727 CPP00450 1065 aa20.18■□□□□ 0.82
LRCH3-208ENST00000443727 GIMD1P0DJR0 217 aa20.18■□□□□ 0.82
LRCH3-208ENST00000443727 MYF5P13349 255 aa20.18■□□□□ 0.82
LRCH3-208ENST00000443727 PEX5P50542 639 aa20.18■□□□□ 0.82
LRCH3-208ENST00000443727 BLKP51451 505 aa20.18■□□□□ 0.82
LRCH3-208ENST00000443727 TAS2R40P59535 323 aa20.18■□□□□ 0.82
LRCH3-208ENST00000443727 MAXP61244 160 aa20.18■□□□□ 0.82
LRCH3-208ENST00000443727 CYP4F3Q08477 520 aa20.18■□□□□ 0.82
LRCH3-208ENST00000443727 TARDBPQ13148 414 aaKnown RBP eCLIP20.18■□□□□ 0.823e-7■■■■■ 35.8
LRCH3-208ENST00000443727 C1orf61Q13536 156 aa20.18■□□□□ 0.82
LRCH3-208ENST00000443727 CAMK2BQ13554 666 aa20.18■□□□□ 0.82
LRCH3-208ENST00000443727 ACOX1Q15067 660 aa20.18■□□□□ 0.82
LRCH3-208ENST00000443727 DPPA4Q7L190 304 aa20.18■□□□□ 0.82
LRCH3-208ENST00000443727 HID1Q8IV36 788 aa20.18■□□□□ 0.82
LRCH3-208ENST00000443727 CNGA4Q8IV77 575 aa20.18■□□□□ 0.82
LRCH3-208ENST00000443727 PGBD5Q8N414 524 aa20.18■□□□□ 0.82
LRCH3-208ENST00000443727 FAM181AQ8N9Y4 354 aa20.18■□□□□ 0.82
LRCH3-208ENST00000443727 ATL2Q8NHH9 583 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms