RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 ST13P5Q8NFI4 369 aaPredicted RBP5.05□□□□□ -1.6
HERC1-201ENST00000443617 HDAC2Q92769 488 aaKnown RBP5.05□□□□□ -1.6
HERC1-201ENST00000443617 CCDC126Q96EE4 140 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 AKIP1Q9NQ31 210 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 COMMD8Q9NX08 183 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 LRCH4O75427 683 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 IL1RL1Q01638 556 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 FAM209AQ5JX71 171 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 SLC39A4Q6P5W5 647 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 C15orf52Q6ZUT6 534 aaKnown RBP5.05□□□□□ -1.6
HERC1-201ENST00000443617 NIPA1Q7RTP0 329 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 MFSD4AQ8N468 514 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 AMER2Q8N7J2 671 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 FTHL17Q9BXU8 183 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 CPNE5Q9HCH3 593 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 MORF4L1Q9UBU8 362 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 MYH9P35579 1960 aaKnown RBP5.05□□□□□ -1.6
HERC1-201ENST00000443617 SNTNA6NMZ2 147 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 TTC34A8MYJ7 566 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 MICAL2O94851 1124 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 HSMCR30P0CW71 290 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 ARRB2P32121 409 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 GBE1Q04446 702 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 CLCQ05315 142 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 CDC20Q12834 499 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 ACOX1Q15067 660 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 P2RY8Q86VZ1 359 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 TXNDC15Q96J42 360 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 FEM1CQ96JP0 617 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 FBXL18Q96ME1 805 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 SOX17Q9H6I2 414 aaPredicted RBP5.05□□□□□ -1.6
HERC1-201ENST00000443617 DDX4Q9NQI0 724 aaKnown RBP5.05□□□□□ -1.6
HERC1-201ENST00000443617 ENTPD7Q9NQZ7 604 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 ENPP5Q9UJA9 477 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 LOC110117498-PIK3R3F6TDL0 507 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 UMPSP11172 480 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 ALDH7A1P49419 539 aaKnown RBP5.04□□□□□ -1.6
HERC1-201ENST00000443617 SELPLGQ14242 412 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 XRRA1Q6P2D8 792 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 FAM160B2Q86V87 743 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 RALGPS2Q86X27 583 aaPredicted RBP5.04□□□□□ -1.6
HERC1-201ENST00000443617 GATAD2AQ86YP4 633 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 ZFPM1Q8IX07 1006 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 TCAIMQ8N3R3 496 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 PIK3R3Q92569 461 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 SLC39A3Q9BRY0 314 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 MUC3BQ9H195 1237 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 LRRC4Q9HBW1 653 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 C12orf4Q9NQ89 552 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 CAMK2BQ13554 666 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 DLG2Q15700 870 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 CENPLQ8N0S6 344 aaPredicted RBP5.04□□□□□ -1.6
HERC1-201ENST00000443617 FAR1Q8WVX9 515 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 CHRAC1Q9NRG0 131 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 RIC8BQ9NVN3 520 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 CRNNQ9UBG3 495 aaPredicted RBP5.04□□□□□ -1.6
HERC1-201ENST00000443617 TIMM22Q9Y584 194 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 PEX16Q9Y5Y5 336 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 DIP2BQ9P265 1576 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 VNN1O95497 513 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 CLDN10P78369 228 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 NPTX1Q15818 432 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 SNX29P2Q8IUI4 249 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 ATL1Q8WXF7 558 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 RBM4BQ9BQ04 359 aaKnown RBP5.04□□□□□ -1.6
HERC1-201ENST00000443617 ZNF670Q9BS34 389 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 RBM4Q9BWF3 364 aaKnown RBP5.04□□□□□ -1.6
HERC1-201ENST00000443617 FAM49BQ9NUQ9 324 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 LRRC37A3O60309 1634 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 BBIP1A8MTZ0 92 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 RGS10O43665 173 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 GAS2O43903 313 aaKnown RBP5.04□□□□□ -1.6
HERC1-201ENST00000443617 LEPRP48357 1165 aaKnown RBP5.04□□□□□ -1.6
HERC1-201ENST00000443617 KCNC4Q03721 635 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 SLC13A2Q13183 592 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 ARHGEF6Q15052 776 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 AGAP9Q5VTM2 703 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 TTLL6Q8N841 843 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 SMG8Q8ND04 991 aaKnown RBP5.04□□□□□ -1.6
HERC1-201ENST00000443617 MYDGFQ969H8 173 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 AGAP2Q99490 1192 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 RHOJQ9H4E5 214 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 SP140LQ9H930 580 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 MYH3P11055 1940 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 MSI1O43347 362 aaKnown RBP5.04□□□□□ -1.6
HERC1-201ENST00000443617 NPHS1O60500 1241 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 NTRK1P04629 796 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 DBTP11182 482 aaKnown RBP5.04□□□□□ -1.6
HERC1-201ENST00000443617 RAP1GAPP47736 663 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 LIMK2P53671 638 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 GOLGA7BQ2TAP0 167 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 PTPN20Q4JDL3 420 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 ACER1Q8TDN7 264 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 FAM162AQ96A26 154 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 RHOBTB2Q9BYZ6 727 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 CDH9Q9ULB4 789 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 ITGB5P18084 799 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 SLC9A3P48764 834 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 RBP5P82980 135 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 WDR49Q8IV35 697 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms