RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 LRRC73Q5JTD7 316 aa8.86□□□□□ -0.99
USP6NL-203ENST00000443016 TMPRSS7Q7RTY8 843 aa8.86□□□□□ -0.99
USP6NL-203ENST00000443016 FAM174AQ8TBP5 190 aa8.86□□□□□ -0.99
USP6NL-203ENST00000443016 PACSIN1Q9BY11 444 aa8.86□□□□□ -0.99
USP6NL-203ENST00000443016 THAP2Q9H0W7 228 aa8.86□□□□□ -0.99
USP6NL-203ENST00000443016 CCDC86Q9H6F5 360 aaKnown RBP8.86□□□□□ -0.99
USP6NL-203ENST00000443016 DNAJC28Q9NX36 388 aa8.86□□□□□ -0.99
USP6NL-203ENST00000443016 ITM2BQ9Y287 266 aa8.86□□□□□ -0.99
USP6NL-203ENST00000443016 POM121BA6NF01 834 aa8.86□□□□□ -0.99
USP6NL-203ENST00000443016 ARHGAP42A6NI28 874 aa8.86□□□□□ -0.99
USP6NL-203ENST00000443016 FFAR2O15552 330 aa8.86□□□□□ -0.99
USP6NL-203ENST00000443016 JUPP14923 745 aa8.86□□□□□ -0.99
USP6NL-203ENST00000443016 MIPP30301 263 aa8.86□□□□□ -0.99
USP6NL-203ENST00000443016 HNF1BP35680 557 aa8.86□□□□□ -0.99
USP6NL-203ENST00000443016 NOP2P46087 812 aaKnown RBP8.86□□□□□ -0.99
USP6NL-203ENST00000443016 DAB2P98082 770 aa8.86□□□□□ -0.99
USP6NL-203ENST00000443016 ZNF542PQ5EBM4 170 aa8.86□□□□□ -0.99
USP6NL-203ENST00000443016 RNF10Q8N5U6 811 aaKnown RBP8.86□□□□□ -0.99
USP6NL-203ENST00000443016 CXorf40AQ8TE69 158 aa8.86□□□□□ -0.99
USP6NL-203ENST00000443016 FNIP1Q8TF40 1166 aa8.86□□□□□ -0.99
USP6NL-203ENST00000443016 SNRNP25Q9BV90 132 aaKnown RBP8.86□□□□□ -0.99
USP6NL-203ENST00000443016 TRIM7Q9C029 511 aa8.86□□□□□ -0.99
USP6NL-203ENST00000443016 KLC2Q9H0B6 622 aa8.86□□□□□ -0.99
USP6NL-203ENST00000443016 ZWILCHQ9H900 591 aa8.86□□□□□ -0.99
USP6NL-203ENST00000443016 KLHL11Q9NVR0 708 aa8.86□□□□□ -0.99
USP6NL-203ENST00000443016 GUCA1BQ9UMX6 200 aa8.86□□□□□ -0.99
USP6NL-203ENST00000443016 PCDHGA1Q9Y5H4 931 aa8.86□□□□□ -0.99
USP6NL-203ENST00000443016 ITPR1Q14643 2758 aa8.85□□□□□ -0.99
USP6NL-203ENST00000443016 NEMP2A6NFY4 417 aa8.85□□□□□ -0.99
USP6NL-203ENST00000443016 WASH4PA8MWX3 477 aa8.85□□□□□ -0.99
USP6NL-203ENST00000443016 ESPNB1AK53 854 aa8.85□□□□□ -0.99
USP6NL-203ENST00000443016 KIF2AO00139 706 aaPredicted RBP8.85□□□□□ -0.99
USP6NL-203ENST00000443016 DFFAO00273 331 aa8.85□□□□□ -0.99
USP6NL-203ENST00000443016 RFPL3O75679 317 aa8.85□□□□□ -0.99
USP6NL-203ENST00000443016 PALMO75781 387 aa8.85□□□□□ -0.99
USP6NL-203ENST00000443016 CYP1A2P05177 515 aa8.85□□□□□ -0.99
USP6NL-203ENST00000443016 ALPPL2P10696 532 aa8.85□□□□□ -0.99
USP6NL-203ENST00000443016 CDK4P11802 303 aa8.85□□□□□ -0.99
USP6NL-203ENST00000443016 DGKAP23743 735 aa8.85□□□□□ -0.99
USP6NL-203ENST00000443016 NDST2P52849 883 aa8.85□□□□□ -0.99
USP6NL-203ENST00000443016 CA9Q16790 459 aa8.85□□□□□ -0.99
USP6NL-203ENST00000443016 GCNT7Q6ZNI0 430 aa8.85□□□□□ -0.99
USP6NL-203ENST00000443016 RFX8Q6ZV50 586 aa8.85□□□□□ -0.99
USP6NL-203ENST00000443016 ABI3BPQ7Z7G0 1075 aa8.85□□□□□ -0.99
USP6NL-203ENST00000443016 MARCH9Q86YJ5 346 aa8.85□□□□□ -0.99
USP6NL-203ENST00000443016 DCP2Q8IU60 420 aaKnown RBP8.85□□□□□ -0.99
USP6NL-203ENST00000443016 MDM1Q8TC05 714 aa8.85□□□□□ -0.99
USP6NL-203ENST00000443016 NUP85Q9BW27 656 aa8.85□□□□□ -0.99
USP6NL-203ENST00000443016 C1QTNF7Q9BXJ2 289 aa8.85□□□□□ -0.99
USP6NL-203ENST00000443016 SP110Q9HB58 689 aa8.85□□□□□ -0.99
USP6NL-203ENST00000443016 GGT7Q9UJ14 662 aa8.85□□□□□ -0.99
USP6NL-203ENST00000443016 HS3ST3A1Q9Y663 406 aa8.85□□□□□ -0.99
USP6NL-203ENST00000443016 LOC400499M0QZD8 3231 aa8.85□□□□□ -0.99
USP6NL-203ENST00000443016 ARID1BQ8NFD5 2236 aaPredicted RBP8.85□□□□□ -0.99
USP6NL-203ENST00000443016 URB1O60287 2271 aaKnown RBP8.85□□□□□ -0.99
USP6NL-203ENST00000443016 MACROD2A1Z1Q3 448 aa8.85□□□□□ -0.99
USP6NL-203ENST00000443016 SRRM3A6NNA2 597 aaPredicted RBP8.85□□□□□ -0.99
USP6NL-203ENST00000443016 J3KR12 359 aa8.85□□□□□ -0.99
USP6NL-203ENST00000443016 LRCH4O75427 683 aa8.85□□□□□ -0.99
USP6NL-203ENST00000443016 DKK1O94907 266 aa8.85□□□□□ -0.99
USP6NL-203ENST00000443016 C1SP09871 688 aa8.85□□□□□ -0.99
USP6NL-203ENST00000443016 CKMT2P17540 419 aa8.85□□□□□ -0.99
USP6NL-203ENST00000443016 ERCC2P18074 760 aa8.85□□□□□ -0.99
USP6NL-203ENST00000443016 RABIFP47224 123 aa8.85□□□□□ -0.99
USP6NL-203ENST00000443016 PAPOLAP51003 745 aaKnown RBP8.85□□□□□ -0.99
USP6NL-203ENST00000443016 THOP1P52888 689 aa8.85□□□□□ -0.99
USP6NL-203ENST00000443016 HNRNPKP61978 463 aaKnown RBP eCLIP8.85□□□□□ -0.99
USP6NL-203ENST00000443016 PDE1CQ14123 709 aaPredicted RBP8.85□□□□□ -0.99
USP6NL-203ENST00000443016 FGL2Q14314 439 aa8.85□□□□□ -0.99
USP6NL-203ENST00000443016 SMAD1Q15797 465 aaKnown RBP8.85□□□□□ -0.99
USP6NL-203ENST00000443016 SMTNL2Q2TAL5 461 aa8.85□□□□□ -0.99
USP6NL-203ENST00000443016 TMPRSS12Q86WS5 348 aa8.85□□□□□ -0.99
USP6NL-203ENST00000443016 REXO1L1PQ8IX06 675 aa8.85□□□□□ -0.99
USP6NL-203ENST00000443016 SYCE1Q8N0S2 351 aa8.85□□□□□ -0.99
USP6NL-203ENST00000443016 SLC22A18ASQ8N1D0 253 aa8.85□□□□□ -0.99
USP6NL-203ENST00000443016 ZNF564Q8TBZ8 553 aaPredicted RBP8.85□□□□□ -0.99
USP6NL-203ENST00000443016 BMFQ96LC9 184 aa8.85□□□□□ -0.99
USP6NL-203ENST00000443016 WRAP53Q9BUR4 548 aaKnown RBP8.85□□□□□ -0.99
USP6NL-203ENST00000443016 C1QTNF2Q9BXJ5 285 aa8.85□□□□□ -0.99
USP6NL-203ENST00000443016 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.85□□□□□ -0.99
USP6NL-203ENST00000443016 TRABD2BA6NFA1 517 aa8.84□□□□□ -0.99
USP6NL-203ENST00000443016 H3BM21 787 aa8.84□□□□□ -0.99
USP6NL-203ENST00000443016 RAD51BO15315 384 aa8.84□□□□□ -0.99
USP6NL-203ENST00000443016 SIGLEC6O43699 453 aa8.84□□□□□ -0.99
USP6NL-203ENST00000443016 LZTS3O60299 673 aaPredicted RBP8.84□□□□□ -0.99
USP6NL-203ENST00000443016 TM7SF2O76062 418 aa8.84□□□□□ -0.99
USP6NL-203ENST00000443016 PIGNO95427 931 aa8.84□□□□□ -0.99
USP6NL-203ENST00000443016 TUBB4AP04350 444 aa8.84□□□□□ -0.99
USP6NL-203ENST00000443016 ARL4AP40617 200 aa8.84□□□□□ -0.99
USP6NL-203ENST00000443016 SSR1P43307 286 aaKnown RBP8.84□□□□□ -0.99
USP6NL-203ENST00000443016 HADHBP55084 474 aaKnown RBP8.84□□□□□ -0.99
USP6NL-203ENST00000443016 GRM3Q14832 879 aa8.84□□□□□ -0.99
USP6NL-203ENST00000443016 KYAT3Q6YP21 454 aaKnown RBP8.84□□□□□ -0.99
USP6NL-203ENST00000443016 PARGQ86W56 976 aa8.84□□□□□ -0.99
USP6NL-203ENST00000443016 PROSER1Q86XN7 944 aa8.84□□□□□ -0.99
USP6NL-203ENST00000443016 PSTKQ8IV42 348 aaKnown RBP8.84□□□□□ -0.99
USP6NL-203ENST00000443016 SLC25A45Q8N413 288 aa8.84□□□□□ -0.99
USP6NL-203ENST00000443016 TTC30BQ8N4P2 665 aa8.84□□□□□ -0.99
USP6NL-203ENST00000443016 ARFGAP1Q8N6T3 406 aa8.84□□□□□ -0.99
USP6NL-203ENST00000443016 TRIM58Q8NG06 486 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms