RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 K7ENP7 123 aa13.92□□□□□ -0.18
PTPRE-203ENST00000442830 PLD2O14939 933 aa13.92□□□□□ -0.18
PTPRE-203ENST00000442830 ZW10O43264 779 aa13.92□□□□□ -0.18
PTPRE-203ENST00000442830 CCP110O43303 1012 aa13.92□□□□□ -0.18
PTPRE-203ENST00000442830 CREB3O43889 395 aa13.92□□□□□ -0.18
PTPRE-203ENST00000442830 TNFP01375 233 aa13.92□□□□□ -0.18
PTPRE-203ENST00000442830 C6P13671 934 aa13.92□□□□□ -0.18
PTPRE-203ENST00000442830 PNLIPP16233 465 aa13.92□□□□□ -0.18
PTPRE-203ENST00000442830 TPI1P60174 286 aa13.92□□□□□ -0.18
PTPRE-203ENST00000442830 C1orf61Q13536 156 aa13.92□□□□□ -0.18
PTPRE-203ENST00000442830 TSR1Q2NL82 804 aaKnown RBP13.92□□□□□ -0.18
PTPRE-203ENST00000442830 PERM1Q5SV97 790 aa13.92□□□□□ -0.18
PTPRE-203ENST00000442830 TPRG1LQ5T0D9 272 aa13.92□□□□□ -0.18
PTPRE-203ENST00000442830 TMCO4Q5TGY1 634 aa13.92□□□□□ -0.18
PTPRE-203ENST00000442830 INO80CQ6PI98 192 aaPredicted RBP13.92□□□□□ -0.18
PTPRE-203ENST00000442830 CCDC81Q6ZN84 652 aa13.92□□□□□ -0.18
PTPRE-203ENST00000442830 HID1Q8IV36 788 aa13.92□□□□□ -0.18
PTPRE-203ENST00000442830 WDR92Q96MX6 357 aa13.92□□□□□ -0.18
PTPRE-203ENST00000442830 MCEEQ96PE7 176 aa13.92□□□□□ -0.18
PTPRE-203ENST00000442830 WRAP53Q9BUR4 548 aaKnown RBP13.92□□□□□ -0.18
PTPRE-203ENST00000442830 APOOQ9BUR5 198 aa13.92□□□□□ -0.18
PTPRE-203ENST00000442830 NOL6Q9H6R4 1146 aaKnown RBP13.92□□□□□ -0.18
PTPRE-203ENST00000442830 CPNE5Q9HCH3 593 aa13.92□□□□□ -0.18
PTPRE-203ENST00000442830 ACSL6Q9UKU0 697 aa13.92□□□□□ -0.18
PTPRE-203ENST00000442830 GPR34Q9UPC5 381 aa13.92□□□□□ -0.18
PTPRE-203ENST00000442830 SIK3Q9Y2K2 1263 aa13.92□□□□□ -0.18
PTPRE-203ENST00000442830 ATP8A1Q9Y2Q0 1164 aa13.92□□□□□ -0.18
PTPRE-203ENST00000442830 LGALS16A8MUM7 142 aa13.91□□□□□ -0.18
PTPRE-203ENST00000442830 D6RAR5 112 aa13.91□□□□□ -0.18
PTPRE-203ENST00000442830 CACNB4O00305 520 aaPredicted RBP13.91□□□□□ -0.18
PTPRE-203ENST00000442830 PDE2AO00408 941 aaPredicted RBP13.91□□□□□ -0.18
PTPRE-203ENST00000442830 TNFRSF10CO14798 259 aa13.91□□□□□ -0.18
PTPRE-203ENST00000442830 PRAMEF11O60813 436 aa13.91□□□□□ -0.18
PTPRE-203ENST00000442830 TNFSF15O95150 251 aa13.91□□□□□ -0.18
PTPRE-203ENST00000442830 HOXC4P09017 264 aaPredicted RBP13.91□□□□□ -0.18
PTPRE-203ENST00000442830 FERP16591 822 aa13.91□□□□□ -0.18
PTPRE-203ENST00000442830 CCKBRP32239 447 aa13.91□□□□□ -0.18
PTPRE-203ENST00000442830 MMP12P39900 470 aa13.91□□□□□ -0.18
PTPRE-203ENST00000442830 KIAA1024LP59773 190 aa13.91□□□□□ -0.18
PTPRE-203ENST00000442830 SRP54P61011 504 aaKnown RBP13.91□□□□□ -0.18
PTPRE-203ENST00000442830 PEX6Q13608 980 aa13.91□□□□□ -0.18
PTPRE-203ENST00000442830 WSCD2Q2TBF2 565 aa13.91□□□□□ -0.18
PTPRE-203ENST00000442830 ENPP7Q6UWV6 458 aa13.91□□□□□ -0.18
PTPRE-203ENST00000442830 LEKR1Q6ZMV7 388 aa13.91□□□□□ -0.18
PTPRE-203ENST00000442830 PSTKQ8IV42 348 aaKnown RBP13.91□□□□□ -0.18
PTPRE-203ENST00000442830 PCDH19Q8TAB3 1148 aa13.91□□□□□ -0.18
PTPRE-203ENST00000442830 VOPP1Q96AW1 172 aa13.91□□□□□ -0.18
PTPRE-203ENST00000442830 PRR11Q96HE9 360 aaPredicted RBP13.91□□□□□ -0.18
PTPRE-203ENST00000442830 ERGIC2Q96RQ1 377 aa13.91□□□□□ -0.18
PTPRE-203ENST00000442830 CLPBQ9H078 707 aa13.91□□□□□ -0.18
PTPRE-203ENST00000442830 TCEAL2Q9H3H9 227 aaPredicted RBP13.91□□□□□ -0.18
PTPRE-203ENST00000442830 SYNDIG1Q9H7V2 258 aa13.91□□□□□ -0.18
PTPRE-203ENST00000442830 PCDH12Q9NPG4 1184 aa13.91□□□□□ -0.18
PTPRE-203ENST00000442830 MBNL1Q9NR56 388 aaKnown RBP13.91□□□□□ -0.18
PTPRE-203ENST00000442830 GULP1Q9UBP9 304 aa13.91□□□□□ -0.18
PTPRE-203ENST00000442830 LHX3Q9UBR4 397 aa13.91□□□□□ -0.18
PTPRE-203ENST00000442830 ATXN7L1Q9ULK2 861 aaPredicted RBP13.91□□□□□ -0.18
PTPRE-203ENST00000442830 MYO6Q9UM54 1294 aa13.91□□□□□ -0.18
PTPRE-203ENST00000442830 SCN8AQ9UQD0 1980 aa13.91□□□□□ -0.18
PTPRE-203ENST00000442830 ASH1LQ9NR48 2969 aaKnown RBP13.9□□□□□ -0.18
PTPRE-203ENST00000442830 TCRBV5S1A1TA0A578 114 aa13.9□□□□□ -0.18
PTPRE-203ENST00000442830 FAM170AA1A519 330 aa13.9□□□□□ -0.18
PTPRE-203ENST00000442830 J3QKU1 62 aa13.9□□□□□ -0.18
PTPRE-203ENST00000442830 GLB1P16278 677 aa13.9□□□□□ -0.18
PTPRE-203ENST00000442830 RENBPP51606 427 aa13.9□□□□□ -0.18
PTPRE-203ENST00000442830 INHBCP55103 352 aa13.9□□□□□ -0.18
PTPRE-203ENST00000442830 NSUN2Q08J23 767 aaKnown RBP eCLIP13.9□□□□□ -0.18
PTPRE-203ENST00000442830 INPP5AQ14642 412 aa13.9□□□□□ -0.18
PTPRE-203ENST00000442830 CLPPQ16740 277 aaPredicted RBP13.9□□□□□ -0.18
PTPRE-203ENST00000442830 ALG11Q2TAA5 492 aa13.9□□□□□ -0.18
PTPRE-203ENST00000442830 RAB6CQ53S08 254 aa13.9□□□□□ -0.18
PTPRE-203ENST00000442830 LRRC73Q5JTD7 316 aa13.9□□□□□ -0.18
PTPRE-203ENST00000442830 PHLDB2Q86SQ0 1253 aa13.9□□□□□ -0.18
PTPRE-203ENST00000442830 PYROXD2Q8N2H3 581 aa13.9□□□□□ -0.18
PTPRE-203ENST00000442830 FBXO39Q8N4B4 442 aa13.9□□□□□ -0.18
PTPRE-203ENST00000442830 PAF1Q8N7H5 531 aa13.9□□□□□ -0.18
PTPRE-203ENST00000442830 KYQ8NBH2 561 aa13.9□□□□□ -0.18
PTPRE-203ENST00000442830 KIAA1524Q8TCG1 905 aa13.9□□□□□ -0.18
PTPRE-203ENST00000442830 TTC9Q92623 222 aa13.9□□□□□ -0.18
PTPRE-203ENST00000442830 CCDC74AQ96AQ1 378 aa13.9□□□□□ -0.18
PTPRE-203ENST00000442830 MED8Q96G25 268 aa13.9□□□□□ -0.18
PTPRE-203ENST00000442830 CCNL2Q96S94 520 aaPredicted RBP13.9□□□□□ -0.18
PTPRE-203ENST00000442830 RBM15Q96T37 977 aaKnown RBP eCLIP13.9□□□□□ -0.18
PTPRE-203ENST00000442830 PCDHB18PQ96TA0 734 aa13.9□□□□□ -0.18
PTPRE-203ENST00000442830 AGPAT1Q99943 283 aa13.9□□□□□ -0.18
PTPRE-203ENST00000442830 CINPQ9BW66 212 aaPredicted RBP13.9□□□□□ -0.18
PTPRE-203ENST00000442830 B3GNT4Q9C0J1 378 aa13.9□□□□□ -0.18
PTPRE-203ENST00000442830 RAB6CQ9H0N0 254 aa13.9□□□□□ -0.18
PTPRE-203ENST00000442830 LRRC19Q9H756 370 aa13.9□□□□□ -0.18
PTPRE-203ENST00000442830 PDFQ9HBH1 243 aa13.9□□□□□ -0.18
PTPRE-203ENST00000442830 PARVAQ9NVD7 372 aa13.9□□□□□ -0.18
PTPRE-203ENST00000442830 ANO10Q9NW15 660 aa13.9□□□□□ -0.18
PTPRE-203ENST00000442830 AKAP7Q9P0M2 348 aaPredicted RBP13.9□□□□□ -0.18
PTPRE-203ENST00000442830 SEPT10Q9P0V9 454 aa13.9□□□□□ -0.18
PTPRE-203ENST00000442830 LIMA1Q9UHB6 759 aaKnown RBP13.9□□□□□ -0.18
PTPRE-203ENST00000442830 APPL1Q9UKG1 709 aa13.9□□□□□ -0.18
PTPRE-203ENST00000442830 ARHGEF17Q96PE2 2063 aaPredicted RBP13.9□□□□□ -0.18
PTPRE-203ENST00000442830 DAPK3O43293 454 aa13.89□□□□□ -0.19
PTPRE-203ENST00000442830 PALMO75781 387 aa13.89□□□□□ -0.19
PTPRE-203ENST00000442830 RNF8O76064 485 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms