RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 PATE3B3GLJ2 98 aa16.13■□□□□ 0.17
USP39-205ENST00000442708 RIOK3O14730 519 aaKnown RBP16.13■□□□□ 0.17
USP39-205ENST00000442708 PCDH8O95206 1070 aa16.13■□□□□ 0.17
USP39-205ENST00000442708 CPP00450 1065 aa16.13■□□□□ 0.17
USP39-205ENST00000442708 TGM1P22735 817 aa16.13■□□□□ 0.17
USP39-205ENST00000442708 MMP12P39900 470 aa16.13■□□□□ 0.17
USP39-205ENST00000442708 MPLP40238 635 aa16.13■□□□□ 0.17
USP39-205ENST00000442708 CCDC15Q0P6D6 951 aa16.13■□□□□ 0.17
USP39-205ENST00000442708 RALGDSQ12967 914 aa16.13■□□□□ 0.17
USP39-205ENST00000442708 KCTD19Q17RG1 926 aaPredicted RBP16.13■□□□□ 0.17
USP39-205ENST00000442708 PLA2G2CQ5R387 149 aa16.13■□□□□ 0.17
USP39-205ENST00000442708 CFAP58Q5T655 872 aa16.13■□□□□ 0.17
USP39-205ENST00000442708 ARMC12Q5T9G4 340 aa16.13■□□□□ 0.17
USP39-205ENST00000442708 PEAR1Q5VY43 1037 aaPredicted RBP16.13■□□□□ 0.17
USP39-205ENST00000442708 PAPD7Q5XG87 772 aaKnown RBP16.13■□□□□ 0.17
USP39-205ENST00000442708 HORMAD1Q86X24 394 aa16.13■□□□□ 0.17
USP39-205ENST00000442708 PRELID2Q8N945 189 aa16.13■□□□□ 0.17
USP39-205ENST00000442708 OXNAD1Q96HP4 312 aaPredicted RBP16.13■□□□□ 0.17
USP39-205ENST00000442708 TRIB3Q96RU7 358 aa16.13■□□□□ 0.17
USP39-205ENST00000442708 WRAP53Q9BUR4 548 aaKnown RBP16.13■□□□□ 0.17
USP39-205ENST00000442708 TRHDEQ9UKU6 1024 aa16.13■□□□□ 0.17
USP39-205ENST00000442708 TTC7AQ9ULT0 858 aaPredicted RBP16.13■□□□□ 0.17
USP39-205ENST00000442708 EP300Q09472 2414 aaPredicted RBP16.12■□□□□ 0.17
USP39-205ENST00000442708 A0A1W2PPC4 97 aa16.12■□□□□ 0.17
USP39-205ENST00000442708 C5orf60A6NFR6 353 aa16.12■□□□□ 0.17
USP39-205ENST00000442708 IGLON5A6NGN9 336 aa16.12■□□□□ 0.17
USP39-205ENST00000442708 A8MX80 341 aa16.12■□□□□ 0.17
USP39-205ENST00000442708 TSPAN6O43657 245 aa16.12■□□□□ 0.17
USP39-205ENST00000442708 MMP20O60882 483 aa16.12■□□□□ 0.17
USP39-205ENST00000442708 ALPIP09923 528 aa16.12■□□□□ 0.17
USP39-205ENST00000442708 PRLRP16471 622 aa16.12■□□□□ 0.17
USP39-205ENST00000442708 CTPS1P17812 591 aa16.12■□□□□ 0.17
USP39-205ENST00000442708 XPAP23025 273 aaPredicted RBP16.12■□□□□ 0.17
USP39-205ENST00000442708 FAM193AP78312 1265 aa16.12■□□□□ 0.17
USP39-205ENST00000442708 SPEM2Q0P670 501 aa16.12■□□□□ 0.17
USP39-205ENST00000442708 CCNG2Q16589 344 aa16.12■□□□□ 0.17
USP39-205ENST00000442708 TMEM52BQ4KMG9 183 aa16.12■□□□□ 0.17
USP39-205ENST00000442708 SYCP2LQ5T4T6 812 aa16.12■□□□□ 0.17
USP39-205ENST00000442708 NEK5Q6P3R8 708 aa16.12■□□□□ 0.17
USP39-205ENST00000442708 KDELC1Q6UW63 502 aa16.12■□□□□ 0.17
USP39-205ENST00000442708 KDELC2Q7Z4H8 507 aa16.12■□□□□ 0.17
USP39-205ENST00000442708 PRUNE1Q86TP1 453 aa16.12■□□□□ 0.17
USP39-205ENST00000442708 SYT12Q8IV01 421 aa16.12■□□□□ 0.17
USP39-205ENST00000442708 RGL4Q8IZJ4 473 aa16.12■□□□□ 0.17
USP39-205ENST00000442708 GLIS1Q8NBF1 620 aa16.12■□□□□ 0.17
USP39-205ENST00000442708 SPATA13Q96N96 652 aa16.12■□□□□ 0.17
USP39-205ENST00000442708 FCRL5Q96RD9 977 aa16.12■□□□□ 0.17
USP39-205ENST00000442708 NAPGQ99747 312 aaPredicted RBP16.12■□□□□ 0.17
USP39-205ENST00000442708 FRMD8P1Q9BZ68 369 aaPredicted RBP16.12■□□□□ 0.17
USP39-205ENST00000442708 MIR1-1HGQ9H1L0 117 aa16.12■□□□□ 0.17
USP39-205ENST00000442708 GBA3Q9H227 469 aa16.12■□□□□ 0.17
USP39-205ENST00000442708 PCDH9Q9HC56 1237 aa16.12■□□□□ 0.17
USP39-205ENST00000442708 HAUS2Q9NVX0 235 aa16.12■□□□□ 0.17
USP39-205ENST00000442708 NCDNQ9UBB6 729 aa16.12■□□□□ 0.17
USP39-205ENST00000442708 B4GALT6Q9UBX8 382 aa16.12■□□□□ 0.17
USP39-205ENST00000442708 RSPH14Q9UHP6 348 aa16.12■□□□□ 0.17
USP39-205ENST00000442708 GMEB2Q9UKD1 530 aa16.12■□□□□ 0.17
USP39-205ENST00000442708 PPIL1Q9Y3C6 166 aa16.12■□□□□ 0.17
USP39-205ENST00000442708 PCDHGA5Q9Y5G8 931 aa16.12■□□□□ 0.17
USP39-205ENST00000442708 TP53BP1Q12888 1972 aaPredicted RBP16.12■□□□□ 0.17
USP39-205ENST00000442708 NPIPB15A6NHN6 443 aaPredicted RBP16.11■□□□□ 0.17
USP39-205ENST00000442708 NEMP1O14524 444 aa16.11■□□□□ 0.17
USP39-205ENST00000442708 GFRA3O60609 400 aa16.11■□□□□ 0.17
USP39-205ENST00000442708 PMPCBO75439 489 aa16.11■□□□□ 0.17
USP39-205ENST00000442708 ETS1P14921 441 aa16.11■□□□□ 0.17
USP39-205ENST00000442708 CD27P26842 260 aa16.11■□□□□ 0.17
USP39-205ENST00000442708 PSMB4P28070 264 aa16.11■□□□□ 0.17
USP39-205ENST00000442708 KCNJ1P48048 391 aa16.11■□□□□ 0.17
USP39-205ENST00000442708 SUOXP51687 545 aa16.11■□□□□ 0.17
USP39-205ENST00000442708 PCSK7Q16549 785 aa16.11■□□□□ 0.17
USP39-205ENST00000442708 WDR45BQ5MNZ6 344 aa16.11■□□□□ 0.17
USP39-205ENST00000442708 TCEAL6Q6IPX3 200 aa16.11■□□□□ 0.17
USP39-205ENST00000442708 DPPA4Q7L190 304 aa16.11■□□□□ 0.17
USP39-205ENST00000442708 ZCCHC9Q8N567 271 aaKnown RBP16.11■□□□□ 0.17
USP39-205ENST00000442708 PAF1Q8N7H5 531 aa16.11■□□□□ 0.17
USP39-205ENST00000442708 RUBCNQ92622 972 aa16.11■□□□□ 0.17
USP39-205ENST00000442708 TCEAL3Q969E4 200 aa16.11■□□□□ 0.17
USP39-205ENST00000442708 RTP4Q96DX8 246 aa16.11■□□□□ 0.17
USP39-205ENST00000442708 FEM1CQ96JP0 617 aa16.11■□□□□ 0.17
USP39-205ENST00000442708 MCCC1Q96RQ3 725 aaPredicted RBP16.11■□□□□ 0.17
USP39-205ENST00000442708 MLPHQ9BV36 600 aaPredicted RBP16.11■□□□□ 0.17
USP39-205ENST00000442708 C1QTNF2Q9BXJ5 285 aa16.11■□□□□ 0.17
USP39-205ENST00000442708 AP1M1Q9BXS5 423 aa16.11■□□□□ 0.17
USP39-205ENST00000442708 FZD3Q9NPG1 666 aa16.11■□□□□ 0.17
USP39-205ENST00000442708 FSCN3Q9NQT6 498 aa16.11■□□□□ 0.17
USP39-205ENST00000442708 PHTF1Q9UMS5 762 aa16.11■□□□□ 0.17
USP39-205ENST00000442708 CA5BQ9Y2D0 317 aa16.11■□□□□ 0.17
USP39-205ENST00000442708 ZKSCAN5Q9Y2L8 839 aa16.11■□□□□ 0.17
USP39-205ENST00000442708 COQ6Q9Y2Z9 468 aa16.11■□□□□ 0.17
USP39-205ENST00000442708 PCDH15Q96QU1 1955 aa16.11■□□□□ 0.17
USP39-205ENST00000442708 RIF1Q5UIP0 2472 aaKnown RBP16.1■□□□□ 0.17
USP39-205ENST00000442708 CFAP54Q96N23 3096 aa16.1■□□□□ 0.17
USP39-205ENST00000442708 PGRMC1O00264 195 aaKnown RBP16.1■□□□□ 0.17
USP39-205ENST00000442708 CES2O00748 559 aa16.1■□□□□ 0.17
USP39-205ENST00000442708 RAD51BO15315 384 aa16.1■□□□□ 0.17
USP39-205ENST00000442708 SLC31A1O15431 190 aa16.1■□□□□ 0.17
USP39-205ENST00000442708 GCATO75600 419 aa16.1■□□□□ 0.17
USP39-205ENST00000442708 METTL18O95568 372 aa16.1■□□□□ 0.17
USP39-205ENST00000442708 GM2AP17900 193 aa16.1■□□□□ 0.17
USP39-205ENST00000442708 LHCGRP22888 699 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms