RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 NUMA1Q14980 2115 aa6.11□□□□□ -1.43
PTPRR-204ENST00000440835 CABIN1Q9Y6J0 2220 aa6.11□□□□□ -1.43
PTPRR-204ENST00000440835 IGLV3-10A0A075B6K4 115 aa6.11□□□□□ -1.43
PTPRR-204ENST00000440835 FAM47DPA6NHR8 397 aa6.11□□□□□ -1.43
PTPRR-204ENST00000440835 ZSCAN9O15535 394 aaPredicted RBP6.11□□□□□ -1.43
PTPRR-204ENST00000440835 TLX3O43711 291 aaPredicted RBP6.11□□□□□ -1.43
PTPRR-204ENST00000440835 BRINP1O60477 761 aa6.11□□□□□ -1.43
PTPRR-204ENST00000440835 PIAS2O75928 621 aa6.11□□□□□ -1.43
PTPRR-204ENST00000440835 RNF8O76064 485 aa6.11□□□□□ -1.43
PTPRR-204ENST00000440835 THEGLP0DJG4 465 aa6.11□□□□□ -1.43
PTPRR-204ENST00000440835 DGKAP23743 735 aa6.11□□□□□ -1.43
PTPRR-204ENST00000440835 ITGB7P26010 798 aa6.11□□□□□ -1.43
PTPRR-204ENST00000440835 CHRNA3P32297 505 aa6.11□□□□□ -1.43
PTPRR-204ENST00000440835 CDH5P33151 784 aaPredicted RBP6.11□□□□□ -1.43
PTPRR-204ENST00000440835 MDH1P40925 334 aaKnown RBP6.11□□□□□ -1.43
PTPRR-204ENST00000440835 CXCR3P49682 368 aa6.11□□□□□ -1.43
PTPRR-204ENST00000440835 CLK1P49759 484 aaKnown RBP6.11□□□□□ -1.43
PTPRR-204ENST00000440835 YPEL5P62699 121 aa6.11□□□□□ -1.43
PTPRR-204ENST00000440835 SLC6A3Q01959 620 aa6.11□□□□□ -1.43
PTPRR-204ENST00000440835 PTK2Q05397 1052 aa6.11□□□□□ -1.43
PTPRR-204ENST00000440835 CNTN1Q12860 1018 aa6.11□□□□□ -1.43
PTPRR-204ENST00000440835 EIF3IQ13347 325 aaKnown RBP6.11□□□□□ -1.43
PTPRR-204ENST00000440835 AUHQ13825 339 aaKnown RBP6.11□□□□□ -1.43
PTPRR-204ENST00000440835 BLMHQ13867 455 aa6.11□□□□□ -1.43
PTPRR-204ENST00000440835 ASIC2Q16515 512 aa6.11□□□□□ -1.43
PTPRR-204ENST00000440835 ZNF284Q2VY69 593 aa6.11□□□□□ -1.43
PTPRR-204ENST00000440835 TMEM259Q4ZIN3 620 aa6.11□□□□□ -1.43
PTPRR-204ENST00000440835 FBXL22Q6P050 247 aa6.11□□□□□ -1.43
PTPRR-204ENST00000440835 ERN2Q76MJ5 926 aaKnown RBP6.11□□□□□ -1.43
PTPRR-204ENST00000440835 ERICH1Q86X53 443 aa6.11□□□□□ -1.43
PTPRR-204ENST00000440835 PHC3Q8NDX5 983 aa6.11□□□□□ -1.43
PTPRR-204ENST00000440835 NT5C3BQ969T7 300 aa6.11□□□□□ -1.43
PTPRR-204ENST00000440835 ERLEC1Q96DZ1 483 aa6.11□□□□□ -1.43
PTPRR-204ENST00000440835 MPP4Q96JB8 637 aa6.11□□□□□ -1.43
PTPRR-204ENST00000440835 FEM1CQ96JP0 617 aa6.11□□□□□ -1.43
PTPRR-204ENST00000440835 KREMEN1Q96MU8 473 aa6.11□□□□□ -1.43
PTPRR-204ENST00000440835 RPRD1AQ96P16 312 aaPredicted RBP6.11□□□□□ -1.43
PTPRR-204ENST00000440835 HAPLN3Q96S86 360 aa6.11□□□□□ -1.43
PTPRR-204ENST00000440835 SLX1AQ9BQ83 275 aa6.11□□□□□ -1.43
PTPRR-204ENST00000440835 OSBPL1AQ9BXW6 950 aa6.11□□□□□ -1.43
PTPRR-204ENST00000440835 PPANQ9NQ55 473 aaKnown RBP6.11□□□□□ -1.43
PTPRR-204ENST00000440835 FAM207AQ9NSI2 230 aaPredicted RBP6.11□□□□□ -1.43
PTPRR-204ENST00000440835 DDIT4Q9NX09 232 aa6.11□□□□□ -1.43
PTPRR-204ENST00000440835 PPARGC1AQ9UBK2 798 aaKnown RBP6.11□□□□□ -1.43
PTPRR-204ENST00000440835 VPS28Q9UK41 221 aa6.11□□□□□ -1.43
PTPRR-204ENST00000440835 SAR1BQ9Y6B6 198 aa6.11□□□□□ -1.43
PTPRR-204ENST00000440835 IKBKGQ9Y6K9 419 aa6.11□□□□□ -1.43
PTPRR-204ENST00000440835 DOCK4Q8N1I0 1966 aa6.1□□□□□ -1.43
PTPRR-204ENST00000440835 ACACAQ13085 2346 aa6.1□□□□□ -1.43
PTPRR-204ENST00000440835 TLDC2A0PJX2 215 aa6.1□□□□□ -1.43
PTPRR-204ENST00000440835 ZSCAN5CA6NGD5 496 aaPredicted RBP6.1□□□□□ -1.43
PTPRR-204ENST00000440835 E5RJQ4 531 aa6.1□□□□□ -1.43
PTPRR-204ENST00000440835 THAP12O43422 761 aa6.1□□□□□ -1.43
PTPRR-204ENST00000440835 SIGLEC6O43699 453 aa6.1□□□□□ -1.43
PTPRR-204ENST00000440835 DNAJC8O75937 253 aaPredicted RBP6.1□□□□□ -1.43
PTPRR-204ENST00000440835 LSM8O95777 96 aaKnown RBP6.1□□□□□ -1.43
PTPRR-204ENST00000440835 MOCS2O96007 188 aaPredicted RBP6.1□□□□□ -1.43
PTPRR-204ENST00000440835 KRT5P13647 590 aa6.1□□□□□ -1.43
PTPRR-204ENST00000440835 NR1D1P20393 614 aa6.1□□□□□ -1.43
PTPRR-204ENST00000440835 CTSOP43234 321 aaPredicted RBP6.1□□□□□ -1.43
PTPRR-204ENST00000440835 GABRB2P47870 512 aa6.1□□□□□ -1.43
PTPRR-204ENST00000440835 NEK3P51956 506 aa6.1□□□□□ -1.43
PTPRR-204ENST00000440835 PPP2CBP62714 309 aa6.1□□□□□ -1.43
PTPRR-204ENST00000440835 PPP2CAP67775 309 aa6.1□□□□□ -1.43
PTPRR-204ENST00000440835 IL9RQ01113 521 aa6.1□□□□□ -1.43
PTPRR-204ENST00000440835 SLC7A5Q01650 507 aa6.1□□□□□ -1.43
PTPRR-204ENST00000440835 ROR2Q01974 943 aaKnown RBP6.1□□□□□ -1.43
PTPRR-204ENST00000440835 TLE3Q04726 772 aa6.1□□□□□ -1.43
PTPRR-204ENST00000440835 LACTB2Q53H82 288 aaPredicted RBP6.1□□□□□ -1.43
PTPRR-204ENST00000440835 SYPL2Q5VXT5 272 aa6.1□□□□□ -1.43
PTPRR-204ENST00000440835 PAPD7Q5XG87 772 aaKnown RBP6.1□□□□□ -1.43
PTPRR-204ENST00000440835 ALS2CLQ60I27 953 aa6.1□□□□□ -1.43
PTPRR-204ENST00000440835 HIBCHQ6NVY1 386 aaPredicted RBP6.1□□□□□ -1.43
PTPRR-204ENST00000440835 DENND1BQ6P3S1 775 aa6.1□□□□□ -1.43
PTPRR-204ENST00000440835 LVRNQ6Q4G3 990 aa6.1□□□□□ -1.43
PTPRR-204ENST00000440835 RRAGAQ7L523 313 aa6.1□□□□□ -1.43
PTPRR-204ENST00000440835 CLEC4CQ8WTT0 213 aa6.1□□□□□ -1.43
PTPRR-204ENST00000440835 SHC3Q92529 594 aa6.1□□□□□ -1.43
PTPRR-204ENST00000440835 TMEM159Q96B96 161 aa6.1□□□□□ -1.43
PTPRR-204ENST00000440835 CCDC42Q96M95 316 aa6.1□□□□□ -1.43
PTPRR-204ENST00000440835 OSBPL9Q96SU4 736 aa6.1□□□□□ -1.43
PTPRR-204ENST00000440835 LRRC1Q9BTT6 524 aa6.1□□□□□ -1.43
PTPRR-204ENST00000440835 IL36AQ9UHA7 158 aa6.1□□□□□ -1.43
PTPRR-204ENST00000440835 BLOC1S6Q9UL45 172 aa6.1□□□□□ -1.43
PTPRR-204ENST00000440835 RAI2Q9Y5P3 530 aa6.1□□□□□ -1.43
PTPRR-204ENST00000440835 URB1O60287 2271 aaKnown RBP6.1□□□□□ -1.43
PTPRR-204ENST00000440835 FAM149AA5PLN7 773 aa6.1□□□□□ -1.43
PTPRR-204ENST00000440835 KCNK3O14649 394 aa6.1□□□□□ -1.43
PTPRR-204ENST00000440835 DIAPH2O60879 1101 aa6.1□□□□□ -1.43
PTPRR-204ENST00000440835 GSRP00390 522 aa6.1□□□□□ -1.43
PTPRR-204ENST00000440835 CSF2P04141 144 aa6.1□□□□□ -1.43
PTPRR-204ENST00000440835 RHOCP08134 193 aa6.1□□□□□ -1.43
PTPRR-204ENST00000440835 SFTPCP11686 197 aa6.1□□□□□ -1.43
PTPRR-204ENST00000440835 IMPDH2P12268 514 aa6.1□□□□□ -1.43
PTPRR-204ENST00000440835 SRCP12931 536 aa6.1□□□□□ -1.43
PTPRR-204ENST00000440835 NME1P15531 152 aaKnown RBP6.1□□□□□ -1.43
PTPRR-204ENST00000440835 FERP16591 822 aa6.1□□□□□ -1.43
PTPRR-204ENST00000440835 HNRNPH3P31942 346 aaKnown RBP6.1□□□□□ -1.43
PTPRR-204ENST00000440835 L1CAMP32004 1257 aa6.1□□□□□ -1.43
PTPRR-204ENST00000440835 INHBCP55103 352 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms