RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 FAM171BQ6P995 826 aa13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 SPATA2LQ8IUW3 424 aaPredicted RBP13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 LPGAT1Q92604 370 aa13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 PSMG2Q969U7 264 aa13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 C3orf30Q96M34 536 aa13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 ACBD6Q9BR61 282 aa13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 NOL6Q9H6R4 1146 aaKnown RBP13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 DSEQ9UL01 958 aa13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 RALGAPA2Q2PPJ7 1873 aa13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 AP3B1O00203 1094 aa13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 THPOP40225 353 aa13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 POU4F1Q01851 419 aa13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 NADK2Q4G0N4 442 aa13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 SLC39A12Q504Y0 691 aa13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 HECTD2Q5U5R9 776 aa13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 SETD3Q86TU7 594 aaPredicted RBP13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 MIB1Q86YT6 1006 aa13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 OR13J1Q8NGT2 312 aa13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 CACNA2D2Q9NY47 1150 aa13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 PADI3Q9ULW8 664 aa13.63□□□□□ -0.23
HERPUD1-204ENST00000439977 KIF3CO14782 793 aa13.62□□□□□ -0.23
HERPUD1-204ENST00000439977 SOAT2O75908 522 aa13.62□□□□□ -0.23
HERPUD1-204ENST00000439977 IGLV3-25P01717 112 aa13.62□□□□□ -0.23
HERPUD1-204ENST00000439977 PRSS56P0CW18 603 aa13.62□□□□□ -0.23
HERPUD1-204ENST00000439977 RPL10P27635 214 aaKnown RBP13.62□□□□□ -0.23
HERPUD1-204ENST00000439977 GRK4P32298 578 aa13.62□□□□□ -0.23
HERPUD1-204ENST00000439977 YBX1P67809 324 aaKnown RBP13.62□□□□□ -0.23
HERPUD1-204ENST00000439977 MORN1Q5T089 497 aa13.62□□□□□ -0.23
HERPUD1-204ENST00000439977 PIK3R6Q5UE93 754 aa13.62□□□□□ -0.23
HERPUD1-204ENST00000439977 AGAP9Q5VTM2 703 aa13.62□□□□□ -0.23
HERPUD1-204ENST00000439977 REP15Q6BDI9 236 aa13.62□□□□□ -0.23
HERPUD1-204ENST00000439977 PELI3Q8N2H9 469 aa13.62□□□□□ -0.23
HERPUD1-204ENST00000439977 GRIN3AQ8TCU5 1115 aa13.62□□□□□ -0.23
HERPUD1-204ENST00000439977 ZFAND2BQ8WV99 257 aa13.62□□□□□ -0.23
HERPUD1-204ENST00000439977 PPWD1Q96BP3 646 aaKnown RBP13.62□□□□□ -0.23
HERPUD1-204ENST00000439977 TSPAN18Q96SJ8 248 aa13.62□□□□□ -0.23
HERPUD1-204ENST00000439977 CIB1Q99828 191 aa13.62□□□□□ -0.23
HERPUD1-204ENST00000439977 COQ10BQ9H8M1 238 aa13.62□□□□□ -0.23
HERPUD1-204ENST00000439977 ABCC13Q9NSE7 274 aa13.62□□□□□ -0.23
HERPUD1-204ENST00000439977 DDX18Q9NVP1 670 aaKnown RBP13.62□□□□□ -0.23
HERPUD1-204ENST00000439977 TBC1D30Q9Y2I9 924 aa13.62□□□□□ -0.23
HERPUD1-204ENST00000439977 TRPV2Q9Y5S1 764 aa13.62□□□□□ -0.23
HERPUD1-204ENST00000439977 PRSS51A0A1B0GVH4 220 aa13.62□□□□□ -0.23
HERPUD1-204ENST00000439977 C7orf72A4D263 438 aa13.62□□□□□ -0.23
HERPUD1-204ENST00000439977 NPHS1O60500 1241 aa13.62□□□□□ -0.23
HERPUD1-204ENST00000439977 LTA4HP09960 611 aaKnown RBP13.62□□□□□ -0.23
HERPUD1-204ENST00000439977 CHRM1P11229 460 aaPredicted RBP13.62□□□□□ -0.23
HERPUD1-204ENST00000439977 SERPINH1P50454 418 aaKnown RBP13.62□□□□□ -0.23
HERPUD1-204ENST00000439977 PRKAA2P54646 552 aa13.62□□□□□ -0.23
HERPUD1-204ENST00000439977 PRAMEP78395 509 aa13.62□□□□□ -0.23
HERPUD1-204ENST00000439977 ARTNQ5T4W7 220 aa13.62□□□□□ -0.23
HERPUD1-204ENST00000439977 SPRYD7Q5W111 196 aa13.62□□□□□ -0.23
HERPUD1-204ENST00000439977 KIAA0930Q6ICG6 404 aaPredicted RBP13.62□□□□□ -0.23
HERPUD1-204ENST00000439977 TAF2Q6P1X5 1199 aa13.62□□□□□ -0.23
HERPUD1-204ENST00000439977 CD300LGQ6UXG3 332 aa13.62□□□□□ -0.23
HERPUD1-204ENST00000439977 ARHGAP18Q8N392 663 aa13.62□□□□□ -0.23
HERPUD1-204ENST00000439977 MARVELD2Q8N4S9 558 aa13.62□□□□□ -0.23
HERPUD1-204ENST00000439977 TTC16Q8NEE8 873 aa13.62□□□□□ -0.23
HERPUD1-204ENST00000439977 MAELQ96JY0 434 aaKnown RBP13.62□□□□□ -0.23
HERPUD1-204ENST00000439977 HAPLN3Q96S86 360 aa13.62□□□□□ -0.23
HERPUD1-204ENST00000439977 VWA7Q9Y334 891 aa13.62□□□□□ -0.23
HERPUD1-204ENST00000439977 TRAF6Q9Y4K3 522 aa13.62□□□□□ -0.23
HERPUD1-204ENST00000439977 A0A087X1B8 175 aa13.61□□□□□ -0.23
HERPUD1-204ENST00000439977 TRIM38O00635 465 aa13.61□□□□□ -0.23
HERPUD1-204ENST00000439977 DENRO43583 198 aaKnown RBP13.61□□□□□ -0.23
HERPUD1-204ENST00000439977 CALRP27797 417 aaKnown RBP13.61□□□□□ -0.23
HERPUD1-204ENST00000439977 PSMD5Q16401 504 aa13.61□□□□□ -0.23
HERPUD1-204ENST00000439977 C11orf91Q3C1V1 193 aa13.61□□□□□ -0.23
HERPUD1-204ENST00000439977 MYO1HQ8N1T3 1032 aa13.61□□□□□ -0.23
HERPUD1-204ENST00000439977 RTL3Q8N8U3 475 aaKnown RBP13.61□□□□□ -0.23
HERPUD1-204ENST00000439977 TMEM102Q8N9M5 508 aaPredicted RBP13.61□□□□□ -0.23
HERPUD1-204ENST00000439977 IRGQQ8WZA9 623 aa13.61□□□□□ -0.23
HERPUD1-204ENST00000439977 MPP4Q96JB8 637 aa13.61□□□□□ -0.23
HERPUD1-204ENST00000439977 RPL10LQ96L21 214 aaKnown RBP13.61□□□□□ -0.23
HERPUD1-204ENST00000439977 TBATAQ96M53 351 aa13.61□□□□□ -0.23
HERPUD1-204ENST00000439977 KCNA7Q96RP8 456 aa13.61□□□□□ -0.23
HERPUD1-204ENST00000439977 ADAM2Q99965 735 aa13.61□□□□□ -0.23
HERPUD1-204ENST00000439977 KATNAL1Q9BW62 490 aa13.61□□□□□ -0.23
HERPUD1-204ENST00000439977 NOL11Q9H8H0 719 aaKnown RBP13.61□□□□□ -0.23
HERPUD1-204ENST00000439977 UXTQ9UBK9 157 aaPredicted RBP13.61□□□□□ -0.23
HERPUD1-204ENST00000439977 AP4S1Q9Y587 144 aa13.61□□□□□ -0.23
HERPUD1-204ENST00000439977 ACTL7AQ9Y615 435 aa13.61□□□□□ -0.23
HERPUD1-204ENST00000439977 CKMT2P17540 419 aa13.61□□□□□ -0.23
HERPUD1-204ENST00000439977 EIF4EBP2Q13542 120 aaPredicted RBP13.61□□□□□ -0.23
HERPUD1-204ENST00000439977 TRIM25Q14258 630 aaKnown RBP13.61□□□□□ -0.23
HERPUD1-204ENST00000439977 MGAT5BQ3V5L5 792 aa13.61□□□□□ -0.23
HERPUD1-204ENST00000439977 MTX3Q5HYI7 312 aa13.61□□□□□ -0.23
HERPUD1-204ENST00000439977 MANEALQ5VSG8 457 aa13.61□□□□□ -0.23
HERPUD1-204ENST00000439977 ZFP1Q6P2D0 407 aa13.61□□□□□ -0.23
HERPUD1-204ENST00000439977 KLC3Q6P597 504 aa13.61□□□□□ -0.23
HERPUD1-204ENST00000439977 CYHR1Q6ZMK1 362 aa13.61□□□□□ -0.23
HERPUD1-204ENST00000439977 BLOC1S5Q8TDH9 187 aa13.61□□□□□ -0.23
HERPUD1-204ENST00000439977 DIS3LQ8TF46 1054 aaKnown RBP13.61□□□□□ -0.23
HERPUD1-204ENST00000439977 RSPH1Q8WYR4 309 aa13.61□□□□□ -0.23
HERPUD1-204ENST00000439977 B3GALT6Q96L58 329 aa13.61□□□□□ -0.23
HERPUD1-204ENST00000439977 NSUN5Q96P11 429 aaKnown RBP13.61□□□□□ -0.23
HERPUD1-204ENST00000439977 SLC29A1Q99808 456 aa13.61□□□□□ -0.23
HERPUD1-204ENST00000439977 Q9H521 79 aa13.61□□□□□ -0.23
HERPUD1-204ENST00000439977 EPS15L1Q9UBC2 864 aa13.61□□□□□ -0.23
HERPUD1-204ENST00000439977 FNDC3AQ9Y2H6 1198 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms