RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 CNTD1Q8N815 330 aa11.9□□□□□ -0.5
HSPG2-206ENST00000439717 TTC13Q8NBP0 860 aa11.9□□□□□ -0.5
HSPG2-206ENST00000439717 TMEM145Q8NBT3 493 aa11.9□□□□□ -0.5
HSPG2-206ENST00000439717 ACTL9Q8TC94 416 aa11.9□□□□□ -0.5
HSPG2-206ENST00000439717 PDCD6IPQ8WUM4 868 aaKnown RBP11.9□□□□□ -0.5
HSPG2-206ENST00000439717 AGAP3Q96P47 875 aa11.9□□□□□ -0.5
HSPG2-206ENST00000439717 LENG8Q96PV6 779 aaPredicted RBP11.9□□□□□ -0.5
HSPG2-206ENST00000439717 FERMT1Q9BQL6 677 aa11.9□□□□□ -0.5
HSPG2-206ENST00000439717 HERPUD2Q9BSE4 406 aa11.9□□□□□ -0.5
HSPG2-206ENST00000439717 C1QTNF7Q9BXJ2 289 aa11.9□□□□□ -0.5
HSPG2-206ENST00000439717 KCNF1Q9H3M0 494 aa11.9□□□□□ -0.5
HSPG2-206ENST00000439717 AASDHPPTQ9NRN7 309 aa11.9□□□□□ -0.5
HSPG2-206ENST00000439717 RXFP3Q9NSD7 469 aa11.9□□□□□ -0.5
HSPG2-206ENST00000439717 SEPT10Q9P0V9 454 aa11.9□□□□□ -0.5
HSPG2-206ENST00000439717 GGT7Q9UJ14 662 aa11.9□□□□□ -0.5
HSPG2-206ENST00000439717 ITM2BQ9Y287 266 aa11.9□□□□□ -0.5
HSPG2-206ENST00000439717 PPIL1Q9Y3C6 166 aa11.9□□□□□ -0.5
HSPG2-206ENST00000439717 TTLL3Q9Y4R7 772 aa11.9□□□□□ -0.5
HSPG2-206ENST00000439717 PCDHB9Q9Y5E1 797 aa11.9□□□□□ -0.5
HSPG2-206ENST00000439717 RAI2Q9Y5P3 530 aa11.9□□□□□ -0.5
HSPG2-206ENST00000439717 HS3ST3A1Q9Y663 406 aa11.9□□□□□ -0.5
HSPG2-206ENST00000439717 SHROOM3Q8TF72 1996 aa11.9□□□□□ -0.5
HSPG2-206ENST00000439717 SDK1Q7Z5N4 2213 aa11.9□□□□□ -0.51
HSPG2-206ENST00000439717 GVINP1Q7Z2Y8 2422 aa11.89□□□□□ -0.51
HSPG2-206ENST00000439717 A0A1B0GVT2 93 aa11.89□□□□□ -0.51
HSPG2-206ENST00000439717 A0A1W2PR77 199 aa11.89□□□□□ -0.51
HSPG2-206ENST00000439717 IGLON5A6NGN9 336 aa11.89□□□□□ -0.51
HSPG2-206ENST00000439717 H7C0C1 242 aa11.89□□□□□ -0.51
HSPG2-206ENST00000439717 CDX4O14627 284 aaPredicted RBP11.89□□□□□ -0.51
HSPG2-206ENST00000439717 FZD6O60353 706 aa11.89□□□□□ -0.51
HSPG2-206ENST00000439717 GDF9O60383 454 aa11.89□□□□□ -0.51
HSPG2-206ENST00000439717 TM7SF2O76062 418 aa11.89□□□□□ -0.51
HSPG2-206ENST00000439717 CER1O95813 267 aa11.89□□□□□ -0.51
HSPG2-206ENST00000439717 PAK4O96013 591 aaPredicted RBP11.89□□□□□ -0.51
HSPG2-206ENST00000439717 ITIH2P19823 946 aa11.89□□□□□ -0.51
HSPG2-206ENST00000439717 PTPN3P26045 913 aa11.89□□□□□ -0.51
HSPG2-206ENST00000439717 ATP5OP48047 213 aa11.89□□□□□ -0.51
HSPG2-206ENST00000439717 C21orf59P57076 290 aa11.89□□□□□ -0.51
HSPG2-206ENST00000439717 RPL26P61254 145 aaKnown RBP11.89□□□□□ -0.51
HSPG2-206ENST00000439717 BNC1Q01954 994 aa11.89□□□□□ -0.51
HSPG2-206ENST00000439717 NIPAL4Q0D2K0 466 aa11.89□□□□□ -0.51
HSPG2-206ENST00000439717 WASHC5Q12768 1159 aa11.89□□□□□ -0.51
HSPG2-206ENST00000439717 KLF1Q13351 362 aaPredicted RBP11.89□□□□□ -0.51
HSPG2-206ENST00000439717 FGL2Q14314 439 aa11.89□□□□□ -0.51
HSPG2-206ENST00000439717 LRRC73Q5JTD7 316 aa11.89□□□□□ -0.51
HSPG2-206ENST00000439717 SEL1L2Q5TEA6 688 aa11.89□□□□□ -0.51
HSPG2-206ENST00000439717 STPG1Q5TH74 334 aa11.89□□□□□ -0.51
HSPG2-206ENST00000439717 AADACL2Q6P093 401 aa11.89□□□□□ -0.51
HSPG2-206ENST00000439717 DPPA4Q7L190 304 aa11.89□□□□□ -0.51
HSPG2-206ENST00000439717 CDKL3Q8IVW4 592 aaPredicted RBP11.89□□□□□ -0.51
HSPG2-206ENST00000439717 DENND6BQ8NEG7 585 aa11.89□□□□□ -0.51
HSPG2-206ENST00000439717 HTR3CQ8WXA8 447 aa11.89□□□□□ -0.51
HSPG2-206ENST00000439717 KLK6Q92876 244 aa11.89□□□□□ -0.51
HSPG2-206ENST00000439717 IMP4Q96G21 291 aaKnown RBP11.89□□□□□ -0.51
HSPG2-206ENST00000439717 TEKT5Q96M29 485 aa11.89□□□□□ -0.51
HSPG2-206ENST00000439717 GTPBP2Q9BX10 602 aaKnown RBP11.89□□□□□ -0.51
HSPG2-206ENST00000439717 SLC25A51Q9H1U9 297 aa11.89□□□□□ -0.51
HSPG2-206ENST00000439717 CARD9Q9H257 536 aa11.89□□□□□ -0.51
HSPG2-206ENST00000439717 DNAAF2Q9NVR5 837 aaKnown RBP11.89□□□□□ -0.51
HSPG2-206ENST00000439717 TRHDEQ9UKU6 1024 aa11.89□□□□□ -0.51
HSPG2-206ENST00000439717 CDV3Q9UKY7 258 aaKnown RBP11.89□□□□□ -0.51
HSPG2-206ENST00000439717 RPL26L1Q9UNX3 145 aaKnown RBP11.89□□□□□ -0.51
HSPG2-206ENST00000439717 ANKRD6Q9Y2G4 727 aa11.89□□□□□ -0.51
HSPG2-206ENST00000439717 PCDH15Q96QU1 1955 aa11.88□□□□□ -0.51
HSPG2-206ENST00000439717 TLR4O00206 839 aa11.88□□□□□ -0.51
HSPG2-206ENST00000439717 SLC30A4O14863 429 aa11.88□□□□□ -0.51
HSPG2-206ENST00000439717 WNT9AO14904 365 aa11.88□□□□□ -0.51
HSPG2-206ENST00000439717 DFNA5O60443 496 aa11.88□□□□□ -0.51
HSPG2-206ENST00000439717 MMP20O60882 483 aa11.88□□□□□ -0.51
HSPG2-206ENST00000439717 WNT1P04628 370 aa11.88□□□□□ -0.51
HSPG2-206ENST00000439717 MMP2P08253 660 aa11.88□□□□□ -0.51
HSPG2-206ENST00000439717 RBP3P10745 1247 aa11.88□□□□□ -0.51
HSPG2-206ENST00000439717 CYP2A6P11509 494 aaPredicted RBP11.88□□□□□ -0.51
HSPG2-206ENST00000439717 PRLRP16471 622 aa11.88□□□□□ -0.51
HSPG2-206ENST00000439717 CD86P42081 329 aa11.88□□□□□ -0.51
HSPG2-206ENST00000439717 CTSKP43235 329 aa11.88□□□□□ -0.51
HSPG2-206ENST00000439717 LIG3P49916 1009 aa11.88□□□□□ -0.51
HSPG2-206ENST00000439717 EIF3EP60228 445 aaKnown RBP11.88□□□□□ -0.51
HSPG2-206ENST00000439717 FAM193AP78312 1265 aa11.88□□□□□ -0.51
HSPG2-206ENST00000439717 SKOR1P84550 965 aa11.88□□□□□ -0.51
HSPG2-206ENST00000439717 CCDC173Q0VFZ6 552 aa11.88□□□□□ -0.51
HSPG2-206ENST00000439717 IHHQ14623 411 aa11.88□□□□□ -0.51
HSPG2-206ENST00000439717 AGERQ15109 404 aa11.88□□□□□ -0.51
HSPG2-206ENST00000439717 RSPO4Q2I0M5 234 aaPredicted RBP11.88□□□□□ -0.51
HSPG2-206ENST00000439717 KIF19Q2TAC6 998 aa11.88□□□□□ -0.51
HSPG2-206ENST00000439717 USP45Q70EL2 814 aa11.88□□□□□ -0.51
HSPG2-206ENST00000439717 B4GALNT4Q76KP1 1039 aa11.88□□□□□ -0.51
HSPG2-206ENST00000439717 DCP2Q8IU60 420 aaKnown RBP11.88□□□□□ -0.51
HSPG2-206ENST00000439717 REXO1L1PQ8IX06 675 aa11.88□□□□□ -0.51
HSPG2-206ENST00000439717 MINDY1Q8N5J2 469 aa11.88□□□□□ -0.51
HSPG2-206ENST00000439717 PIH1D2Q8WWB5 315 aa11.88□□□□□ -0.51
HSPG2-206ENST00000439717 TADA1Q96BN2 335 aa11.88□□□□□ -0.51
HSPG2-206ENST00000439717 SCRN2Q96FV2 425 aa11.88□□□□□ -0.51
HSPG2-206ENST00000439717 RTKNQ9BST9 563 aa11.88□□□□□ -0.51
HSPG2-206ENST00000439717 WRAP53Q9BUR4 548 aaKnown RBP11.88□□□□□ -0.51
HSPG2-206ENST00000439717 TDRD1Q9BXT4 1180 aaKnown RBP11.88□□□□□ -0.51
HSPG2-206ENST00000439717 CEP41Q9BYV8 373 aa11.88□□□□□ -0.51
HSPG2-206ENST00000439717 FRMD8P1Q9BZ68 369 aaPredicted RBP11.88□□□□□ -0.51
HSPG2-206ENST00000439717 GLOD4Q9HC38 313 aa11.88□□□□□ -0.51
HSPG2-206ENST00000439717 PCDH9Q9HC56 1237 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms