RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 KLHL40Q2TBA0 621 aa11.58□□□□□ -0.56
IRF1-204ENST00000439555 ZCCHC8Q6NZY4 707 aaKnown RBP11.58□□□□□ -0.56
IRF1-204ENST00000439555 ZNF548Q8NEK5 533 aaPredicted RBP11.58□□□□□ -0.56
IRF1-204ENST00000439555 CXorf40AQ8TE69 158 aa11.58□□□□□ -0.56
IRF1-204ENST00000439555 SPOCK2Q92563 424 aa11.58□□□□□ -0.56
IRF1-204ENST00000439555 APOLD1Q96LR9 279 aa11.58□□□□□ -0.56
IRF1-204ENST00000439555 ZNF599Q96NL3 588 aa11.58□□□□□ -0.56
IRF1-204ENST00000439555 PEBP4Q96S96 227 aa11.58□□□□□ -0.56
IRF1-204ENST00000439555 SEMA4CQ9C0C4 833 aa11.58□□□□□ -0.56
IRF1-204ENST00000439555 PCSK1NQ9UHG2 260 aa11.58□□□□□ -0.56
IRF1-204ENST00000439555 GGT7Q9UJ14 662 aa11.58□□□□□ -0.56
IRF1-204ENST00000439555 ITM2BQ9Y287 266 aa11.58□□□□□ -0.56
IRF1-204ENST00000439555 PIEZO2Q9H5I5 2752 aa11.58□□□□□ -0.56
IRF1-204ENST00000439555 FFAR2O15552 330 aa11.57□□□□□ -0.56
IRF1-204ENST00000439555 ATMINO43313 823 aaPredicted RBP11.57□□□□□ -0.56
IRF1-204ENST00000439555 AQP9O43315 295 aa11.57□□□□□ -0.56
IRF1-204ENST00000439555 LZTS3O60299 673 aaPredicted RBP11.57□□□□□ -0.56
IRF1-204ENST00000439555 MMP20O60882 483 aa11.57□□□□□ -0.56
IRF1-204ENST00000439555 PALMO75781 387 aa11.57□□□□□ -0.56
IRF1-204ENST00000439555 JUNDP17535 347 aa11.57□□□□□ -0.56
IRF1-204ENST00000439555 PBX1P40424 430 aa11.57□□□□□ -0.56
IRF1-204ENST00000439555 RENBPP51606 427 aa11.57□□□□□ -0.56
IRF1-204ENST00000439555 THOP1P52888 689 aa11.57□□□□□ -0.56
IRF1-204ENST00000439555 IL10RBQ08334 325 aa11.57□□□□□ -0.56
IRF1-204ENST00000439555 VAC14Q08AM6 782 aa11.57□□□□□ -0.56
IRF1-204ENST00000439555 EIF2B5Q13144 721 aaKnown RBP11.57□□□□□ -0.56
IRF1-204ENST00000439555 DPYSQ14117 519 aa11.57□□□□□ -0.56
IRF1-204ENST00000439555 DPYSL2Q16555 572 aa11.57□□□□□ -0.56
IRF1-204ENST00000439555 ZNF542PQ5EBM4 170 aa11.57□□□□□ -0.56
IRF1-204ENST00000439555 HGSNATQ68CP4 663 aa11.57□□□□□ -0.56
IRF1-204ENST00000439555 ERAP2Q6P179 960 aa11.57□□□□□ -0.56
IRF1-204ENST00000439555 XKR5Q6UX68 686 aa11.57□□□□□ -0.56
IRF1-204ENST00000439555 MACC1Q6ZN28 852 aa11.57□□□□□ -0.56
IRF1-204ENST00000439555 VPS36Q86VN1 386 aa11.57□□□□□ -0.56
IRF1-204ENST00000439555 ARHGAP12Q8IWW6 846 aa11.57□□□□□ -0.56
IRF1-204ENST00000439555 SDR16C5Q8N3Y7 309 aa11.57□□□□□ -0.56
IRF1-204ENST00000439555 NIPA2Q8N8Q9 360 aa11.57□□□□□ -0.56
IRF1-204ENST00000439555 TP53I13Q8NBR0 393 aaPredicted RBP11.57□□□□□ -0.56
IRF1-204ENST00000439555 ZNF653Q96CK0 615 aa11.57□□□□□ -0.56
IRF1-204ENST00000439555 GRAMD1AQ96CP6 724 aa11.57□□□□□ -0.56
IRF1-204ENST00000439555 ECHDC3Q96DC8 303 aa11.57□□□□□ -0.56
IRF1-204ENST00000439555 PSKH2Q96QS6 385 aa11.57□□□□□ -0.56
IRF1-204ENST00000439555 KCTD15Q96SI1 283 aaPredicted RBP11.57□□□□□ -0.56
IRF1-204ENST00000439555 TRIM7Q9C029 511 aa11.57□□□□□ -0.56
IRF1-204ENST00000439555 ATP13A3Q9H7F0 1226 aa11.57□□□□□ -0.56
IRF1-204ENST00000439555 ZWILCHQ9H900 591 aa11.57□□□□□ -0.56
IRF1-204ENST00000439555 GPATCH2LQ9NWQ4 482 aa11.57□□□□□ -0.56
IRF1-204ENST00000439555 CWC15Q9P013 229 aaKnown RBP11.57□□□□□ -0.56
IRF1-204ENST00000439555 SPASTQ9UBP0 616 aa11.57□□□□□ -0.56
IRF1-204ENST00000439555 KLF15Q9UIH9 416 aa11.57□□□□□ -0.56
IRF1-204ENST00000439555 DOCK4Q8N1I0 1966 aa11.57□□□□□ -0.56
IRF1-204ENST00000439555 LY6G6EA0A0G2JKS1 128 aa11.56□□□□□ -0.56
IRF1-204ENST00000439555 A0A1W2PQ67 120 aa11.56□□□□□ -0.56
IRF1-204ENST00000439555 LMO7DNF2Z398 122 aa11.56□□□□□ -0.56
IRF1-204ENST00000439555 H3BRJ5 948 aa11.56□□□□□ -0.56
IRF1-204ENST00000439555 INSIG1O15503 277 aa11.56□□□□□ -0.56
IRF1-204ENST00000439555 SLC28A2O43868 658 aa11.56□□□□□ -0.56
IRF1-204ENST00000439555 OPA1O60313 960 aa11.56□□□□□ -0.56
IRF1-204ENST00000439555 BUB1BO60566 1050 aaPredicted RBP11.56□□□□□ -0.56
IRF1-204ENST00000439555 MT-CO3P00414 261 aa11.56□□□□□ -0.56
IRF1-204ENST00000439555 SERPING1P05155 500 aa11.56□□□□□ -0.56
IRF1-204ENST00000439555 SKILP12757 684 aa11.56□□□□□ -0.56
IRF1-204ENST00000439555 SERPINA4P29622 427 aa11.56□□□□□ -0.56
IRF1-204ENST00000439555 IGFALSP35858 605 aa11.56□□□□□ -0.56
IRF1-204ENST00000439555 HSPA9P38646 679 aaKnown RBP11.56□□□□□ -0.56
IRF1-204ENST00000439555 BLKP51451 505 aa11.56□□□□□ -0.56
IRF1-204ENST00000439555 CLDN6P56747 220 aa11.56□□□□□ -0.56
IRF1-204ENST00000439555 POLR2LP62875 67 aaKnown RBP11.56□□□□□ -0.56
IRF1-204ENST00000439555 ZBED6P86452 979 aa11.56□□□□□ -0.56
IRF1-204ENST00000439555 FANCCQ00597 558 aa11.56□□□□□ -0.56
IRF1-204ENST00000439555 LY6DQ14210 128 aa11.56□□□□□ -0.56
IRF1-204ENST00000439555 LRRC14Q15048 493 aa11.56□□□□□ -0.56
IRF1-204ENST00000439555 PPP6R3Q5H9R7 873 aaPredicted RBP11.56□□□□□ -0.56
IRF1-204ENST00000439555 CFAP58Q5T655 872 aa11.56□□□□□ -0.56
IRF1-204ENST00000439555 ARHGAP40Q5TG30 622 aa11.56□□□□□ -0.56
IRF1-204ENST00000439555 CDCP2Q5VXM1 449 aa11.56□□□□□ -0.56
IRF1-204ENST00000439555 LVRNQ6Q4G3 990 aa11.56□□□□□ -0.56
IRF1-204ENST00000439555 IGF2-ASQ6U949 168 aa11.56□□□□□ -0.56
IRF1-204ENST00000439555 SRLQ86TD4 932 aa11.56□□□□□ -0.56
IRF1-204ENST00000439555 TSEN2Q8NCE0 465 aaKnown RBP11.56□□□□□ -0.56
IRF1-204ENST00000439555 TPCN2Q8NHX9 752 aa11.56□□□□□ -0.56
IRF1-204ENST00000439555 TEKT4Q8WW24 435 aa11.56□□□□□ -0.56
IRF1-204ENST00000439555 CELF6Q96J87 481 aaKnown RBP11.56□□□□□ -0.56
IRF1-204ENST00000439555 EXOC2Q96KP1 924 aa11.56□□□□□ -0.56
IRF1-204ENST00000439555 IL12RB2Q99665 862 aa11.56□□□□□ -0.56
IRF1-204ENST00000439555 CBX8Q9HC52 389 aa11.56□□□□□ -0.56
IRF1-204ENST00000439555 PCDH12Q9NPG4 1184 aa11.56□□□□□ -0.56
IRF1-204ENST00000439555 SEPT3Q9UH03 358 aa11.56□□□□□ -0.56
IRF1-204ENST00000439555 IL17BQ9UHF5 180 aa11.56□□□□□ -0.56
IRF1-204ENST00000439555 CAPN11Q9UMQ6 739 aa11.56□□□□□ -0.56
IRF1-204ENST00000439555 ATP8A1Q9Y2Q0 1164 aa11.56□□□□□ -0.56
IRF1-204ENST00000439555 U3KQA8 63 aa11.56□□□□□ -0.56
IRF1-204ENST00000439555 UBR5O95071 2799 aaPredicted RBP11.56□□□□□ -0.56
IRF1-204ENST00000439555 PTPN13Q12923 2485 aa11.55□□□□□ -0.56
IRF1-204ENST00000439555 EME2A4GXA9 379 aaPredicted RBP11.55□□□□□ -0.56
IRF1-204ENST00000439555 PIGNO95427 931 aa11.55□□□□□ -0.56
IRF1-204ENST00000439555 ITIH2P19823 946 aa11.55□□□□□ -0.56
IRF1-204ENST00000439555 EIF4A3P38919 411 aaKnown RBP11.55□□□□□ -0.56
IRF1-204ENST00000439555 MMP12P39900 470 aa11.55□□□□□ -0.56
IRF1-204ENST00000439555 ARL4AP40617 200 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms