RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 LIPMQ5VYY2 423 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 SMYD5Q6GMV2 418 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 ZYG11AQ6WRX3 759 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 TMEM26Q6ZUK4 368 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 URGCPQ8TCY9 931 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 HTR3CQ8WXA8 447 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 PBXIP1Q96AQ6 731 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 TMEM176AQ96HP8 235 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 ANKRD36BP1Q96IX9 119 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 FCRL3Q96P31 734 aaPredicted RBP8.63□□□□□ -1.03
HPS4-206ENST00000439453 IL22Q9GZX6 179 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 MID2Q9UJV3 735 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 CPSF3Q9UKF6 684 aaKnown RBP8.63□□□□□ -1.03
HPS4-206ENST00000439453 DPYSL4O14531 572 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 MDM4O15151 490 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 TRIM24O15164 1050 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 PAPSS1O43252 624 aaPredicted RBP8.63□□□□□ -1.03
HPS4-206ENST00000439453 ESRRBO95718 433 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 MYF6P23409 242 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 BMXP51813 675 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 WDR5P61964 334 aaKnown RBP8.63□□□□□ -1.03
HPS4-206ENST00000439453 RALGDSQ12967 914 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 CNKSR3Q6P9H4 555 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 PSRC1Q6PGN9 363 aaPredicted RBP8.63□□□□□ -1.03
HPS4-206ENST00000439453 OTOP2Q7RTS6 562 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 TMCO2Q7Z6W1 182 aaPredicted RBP8.63□□□□□ -1.03
HPS4-206ENST00000439453 TERB1Q8NA31 727 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 DBF4BQ8NFT6 615 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 HEXIM2Q96MH2 286 aaKnown RBP8.63□□□□□ -1.03
HPS4-206ENST00000439453 PPP1R16BQ96T49 567 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 ACE2Q9BYF1 805 aaPredicted RBP8.63□□□□□ -1.03
HPS4-206ENST00000439453 MINDY3Q9H8M7 445 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 EIF2B3Q9NR50 452 aaKnown RBP8.63□□□□□ -1.03
HPS4-206ENST00000439453 SMOXQ9NWM0 555 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 TRIM64A6NGJ6 449 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 GRXCR1A8MXD5 290 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 SULT1C4O75897 302 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 SEC24DO94855 1032 aaPredicted RBP8.62□□□□□ -1.03
HPS4-206ENST00000439453 BMP2P12643 396 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 TTKP33981 857 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 RAB39AQ14964 217 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 EGFLAMQ63HQ2 1017 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 ANKRD26P1Q6NSI1 321 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.62□□□□□ -1.034e-8■□□□□ 10.8
HPS4-206ENST00000439453 TANKQ92844 425 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 LRCH3Q96II8 777 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 ZNF668Q96K58 619 aaPredicted RBP8.62□□□□□ -1.03
HPS4-206ENST00000439453 PGLYRP2Q96PD5 576 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 MRPL4Q9BYD3 311 aaKnown RBP8.62□□□□□ -1.03
HPS4-206ENST00000439453 CCDC68Q9H2F9 335 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 RC3H2Q9HBD1 1191 aaKnown RBP8.62□□□□□ -1.03
HPS4-206ENST00000439453 PALMDQ9NP74 551 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 FAM32AQ9Y421 112 aaKnown RBP8.62□□□□□ -1.03
HPS4-206ENST00000439453 PRORSD1PA6NEY8 169 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 SAC3D1A6NKF1 404 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 ZNF839A8K0R7 811 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 ZNF487B1APH4 448 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 J3QRK9 145 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 TK2O00142 265 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 CILPO75339 1184 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 PARNO95453 639 aaKnown RBP8.62□□□□□ -1.03
HPS4-206ENST00000439453 SDC4P31431 198 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 NAGLUP54802 743 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 NME5P56597 212 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 DSC3Q14574 896 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 NR1D2Q14995 579 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 TMEM130Q8N3G9 435 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 FBXL8Q96CD0 374 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 TCF12Q99081 682 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 AGAP2Q99490 1192 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 OSMRQ99650 979 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 HEPHQ9BQS7 1158 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 MAGEB5Q9BZ81 275 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 NAA50Q9GZZ1 169 aaKnown RBP8.62□□□□□ -1.03
HPS4-206ENST00000439453 DTLQ9NZJ0 730 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 KIAA1522Q9P206 1035 aaPredicted RBP8.62□□□□□ -1.03
HPS4-206ENST00000439453 APOA4P06727 396 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 LINC00271P0C7V0 271 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 VDRP11473 427 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 TFE3P19532 575 aaPredicted RBP8.62□□□□□ -1.03
HPS4-206ENST00000439453 CD52P31358 61 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 EIF2B2P49770 351 aaKnown RBP8.62□□□□□ -1.03
HPS4-206ENST00000439453 RGS7P49802 495 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 LSMEM2Q8N112 164 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 SIX6OS1Q8N1H7 587 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 MFSD2AQ8NA29 543 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 RDH11Q8TC12 318 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 TASP1Q9H6P5 420 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 POLR1BQ9H9Y6 1135 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 GID8Q9NWU2 228 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 SPATA7Q9P0W8 599 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 MFHAS1Q9Y4C4 1052 aa8.62□□□□□ -1.03
HPS4-206ENST00000439453 TRIM64BA6NI03 449 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 DLGAP1O14490 977 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 FGBP02675 491 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 CYP3A5P20815 502 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 PBX2P40425 430 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 CRYBB1P53674 252 aaPredicted RBP8.61□□□□□ -1.03
HPS4-206ENST00000439453 PRKAA2P54646 552 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 OSTNP61366 133 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms