RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 COPB1P53618 953 aaKnown RBP11.28□□□□□ -0.6
CSTF3-203ENST00000438862 YWHAZP63104 245 aaKnown RBP11.28□□□□□ -0.6
CSTF3-203ENST00000438862 B4GALNT1Q00973 533 aa11.28□□□□□ -0.6
CSTF3-203ENST00000438862 SLC20A2Q08357 652 aa11.28□□□□□ -0.6
CSTF3-203ENST00000438862 STX1AQ16623 288 aa11.28□□□□□ -0.6
CSTF3-203ENST00000438862 C5orf22Q49AR2 442 aa11.28□□□□□ -0.6
CSTF3-203ENST00000438862 C14orf28Q4W4Y0 310 aa11.28□□□□□ -0.6
CSTF3-203ENST00000438862 CARD16Q5EG05 197 aa11.28□□□□□ -0.6
CSTF3-203ENST00000438862 C1QL3Q5VWW1 255 aa11.28□□□□□ -0.6
CSTF3-203ENST00000438862 ASB18Q6ZVZ8 466 aa11.28□□□□□ -0.6
CSTF3-203ENST00000438862 PARS2Q7L3T8 475 aaKnown RBP11.28□□□□□ -0.6
CSTF3-203ENST00000438862 RD3Q7Z3Z2 195 aa11.28□□□□□ -0.6
CSTF3-203ENST00000438862 VPS36Q86VN1 386 aa11.28□□□□□ -0.6
CSTF3-203ENST00000438862 SLC34A3Q8N130 599 aa11.28□□□□□ -0.6
CSTF3-203ENST00000438862 DCAF4L2Q8NA75 395 aa11.28□□□□□ -0.6
CSTF3-203ENST00000438862 AGBL5Q8NDL9 886 aa11.28□□□□□ -0.6
CSTF3-203ENST00000438862 ATL2Q8NHH9 583 aa11.28□□□□□ -0.6
CSTF3-203ENST00000438862 TFAP2BQ92481 460 aa11.28□□□□□ -0.6
CSTF3-203ENST00000438862 TSACCQ96A04 125 aaPredicted RBP11.28□□□□□ -0.6
CSTF3-203ENST00000438862 DHTKD1Q96HY7 919 aaPredicted RBP11.28□□□□□ -0.6
CSTF3-203ENST00000438862 RBM15Q96T37 977 aaKnown RBP eCLIP11.28□□□□□ -0.6
CSTF3-203ENST00000438862 CEP44Q9C0F1 390 aa11.28□□□□□ -0.6
CSTF3-203ENST00000438862 NAT10Q9H0A0 1025 aaKnown RBP11.28□□□□□ -0.6
CSTF3-203ENST00000438862 POPDC2Q9HBU9 364 aa11.28□□□□□ -0.6
CSTF3-203ENST00000438862 DONSONQ9NYP3 566 aa11.28□□□□□ -0.6
CSTF3-203ENST00000438862 PILRAQ9UKJ1 303 aa11.28□□□□□ -0.6
CSTF3-203ENST00000438862 VANGL2Q9ULK5 521 aa11.28□□□□□ -0.6
CSTF3-203ENST00000438862 B3GALT1Q9Y5Z6 326 aa11.28□□□□□ -0.6
CSTF3-203ENST00000438862 SYCE3A1L190 88 aa11.27□□□□□ -0.61
CSTF3-203ENST00000438862 C16orf96A6NNT2 1141 aa11.27□□□□□ -0.61
CSTF3-203ENST00000438862 M0QYV0 167 aa11.27□□□□□ -0.61
CSTF3-203ENST00000438862 PSMA7O14818 248 aa11.27□□□□□ -0.61
CSTF3-203ENST00000438862 B4GAT1O43505 415 aa11.27□□□□□ -0.61
CSTF3-203ENST00000438862 ZNF821O75541 412 aaPredicted RBP11.27□□□□□ -0.61
CSTF3-203ENST00000438862 TM7SF2O76062 418 aa11.27□□□□□ -0.61
CSTF3-203ENST00000438862 CLDN1O95832 211 aa11.27□□□□□ -0.61
CSTF3-203ENST00000438862 TNFP01375 233 aa11.27□□□□□ -0.61
CSTF3-203ENST00000438862 RHOCP08134 193 aa11.27□□□□□ -0.61
CSTF3-203ENST00000438862 TCN2P20062 427 aa11.27□□□□□ -0.61
CSTF3-203ENST00000438862 BMP6P22004 513 aa11.27□□□□□ -0.61
CSTF3-203ENST00000438862 OAS2P29728 719 aaKnown RBP11.27□□□□□ -0.61
CSTF3-203ENST00000438862 ACADSBP45954 432 aa11.27□□□□□ -0.61
CSTF3-203ENST00000438862 SRP54P61011 504 aaKnown RBP11.27□□□□□ -0.61
CSTF3-203ENST00000438862 SH3BP2P78314 561 aa11.27□□□□□ -0.61
CSTF3-203ENST00000438862 HLTFQ14527 1009 aaKnown RBP eCLIP11.27□□□□□ -0.61
CSTF3-203ENST00000438862 ALG11Q2TAA5 492 aa11.27□□□□□ -0.61
CSTF3-203ENST00000438862 EDRF1Q3B7T1 1238 aa11.27□□□□□ -0.61
CSTF3-203ENST00000438862 DCAF12Q5T6F0 453 aa11.27□□□□□ -0.61
CSTF3-203ENST00000438862 RETSATQ6NUM9 610 aa11.27□□□□□ -0.61
CSTF3-203ENST00000438862 ENPP7Q6UWV6 458 aa11.27□□□□□ -0.61
CSTF3-203ENST00000438862 SETD3Q86TU7 594 aaPredicted RBP11.27□□□□□ -0.61
CSTF3-203ENST00000438862 NLGN4XQ8N0W4 816 aa11.27□□□□□ -0.61
CSTF3-203ENST00000438862 PCDH20Q8N6Y1 951 aaKnown RBP11.27□□□□□ -0.61
CSTF3-203ENST00000438862 EHBP1Q8NDI1 1231 aa11.27□□□□□ -0.61
CSTF3-203ENST00000438862 RCBTB1Q8NDN9 531 aa11.27□□□□□ -0.61
CSTF3-203ENST00000438862 FAM46DQ8NEK8 389 aa11.27□□□□□ -0.61
CSTF3-203ENST00000438862 NLGN4YQ8NFZ3 816 aaPredicted RBP11.27□□□□□ -0.61
CSTF3-203ENST00000438862 ART4Q93070 314 aa11.27□□□□□ -0.61
CSTF3-203ENST00000438862 TEFMQ96QE5 360 aaKnown RBP11.27□□□□□ -0.61
CSTF3-203ENST00000438862 RDH14Q9HBH5 336 aa11.27□□□□□ -0.61
CSTF3-203ENST00000438862 MBNL1Q9NR56 388 aaKnown RBP11.27□□□□□ -0.61
CSTF3-203ENST00000438862 SLC39A1Q9NY26 324 aa11.27□□□□□ -0.61
CSTF3-203ENST00000438862 KCNMB2Q9Y691 235 aa11.27□□□□□ -0.61
CSTF3-203ENST00000438862 ITPR3Q14573 2671 aa11.27□□□□□ -0.61
CSTF3-203ENST00000438862 CSMD1Q96PZ7 3565 aa11.27□□□□□ -0.61
CSTF3-203ENST00000438862 IGHV5-10-1A0A0J9YXX1 117 aa11.26□□□□□ -0.61
CSTF3-203ENST00000438862 BICDL2A1A5D9 508 aa11.26□□□□□ -0.61
CSTF3-203ENST00000438862 B4E171 279 aa11.26□□□□□ -0.61
CSTF3-203ENST00000438862 K7EM74 188 aa11.26□□□□□ -0.61
CSTF3-203ENST00000438862 ENDOD1O94919 500 aa11.26□□□□□ -0.61
CSTF3-203ENST00000438862 NR1D1P20393 614 aa11.26□□□□□ -0.61
CSTF3-203ENST00000438862 TBXAS1P24557 533 aaPredicted RBP11.26□□□□□ -0.61
CSTF3-203ENST00000438862 CSTF2P33240 577 aaKnown RBP eCLIP11.26□□□□□ -0.619e-9■□□□□ 9.9
CSTF3-203ENST00000438862 TSPAN7P41732 249 aa11.26□□□□□ -0.61
CSTF3-203ENST00000438862 ABL2P42684 1182 aa11.26□□□□□ -0.61
CSTF3-203ENST00000438862 PRCPP42785 496 aa11.26□□□□□ -0.61
CSTF3-203ENST00000438862 IRAK1P51617 712 aa11.26□□□□□ -0.61
CSTF3-203ENST00000438862 CCNHP51946 323 aaPredicted RBP11.26□□□□□ -0.61
CSTF3-203ENST00000438862 LIMK2P53671 638 aa11.26□□□□□ -0.61
CSTF3-203ENST00000438862 RAB15P59190 212 aa11.26□□□□□ -0.61
CSTF3-203ENST00000438862 LRRC63Q05C16 580 aa11.26□□□□□ -0.61
CSTF3-203ENST00000438862 TYRO3Q06418 890 aa11.26□□□□□ -0.61
CSTF3-203ENST00000438862 ABHD18Q0P651 414 aa11.26□□□□□ -0.61
CSTF3-203ENST00000438862 ADAM9Q13443 819 aa11.26□□□□□ -0.61
CSTF3-203ENST00000438862 TCEA2Q15560 299 aa11.26□□□□□ -0.61
CSTF3-203ENST00000438862 ZNF805Q5CZA5 627 aa11.26□□□□□ -0.61
CSTF3-203ENST00000438862 LINGO4Q6UY18 593 aa11.26□□□□□ -0.61
CSTF3-203ENST00000438862 TAF8Q7Z7C8 310 aa11.26□□□□□ -0.61
CSTF3-203ENST00000438862 UBR7Q8N806 425 aa11.26□□□□□ -0.61
CSTF3-203ENST00000438862 TP53I13Q8NBR0 393 aaPredicted RBP11.26□□□□□ -0.61
CSTF3-203ENST00000438862 PMEPA1Q969W9 287 aa11.26□□□□□ -0.61
CSTF3-203ENST00000438862 MED15Q96RN5 788 aa11.26□□□□□ -0.61
CSTF3-203ENST00000438862 BPIFA3Q9BQP9 254 aa11.26□□□□□ -0.61
CSTF3-203ENST00000438862 SPRY4Q9C004 299 aa11.26□□□□□ -0.61
CSTF3-203ENST00000438862 TRIT1Q9H3H1 467 aaKnown RBP11.26□□□□□ -0.61
CSTF3-203ENST00000438862 THAP9Q9H5L6 903 aa11.26□□□□□ -0.61
CSTF3-203ENST00000438862 CASS4Q9NQ75 786 aa11.26□□□□□ -0.61
CSTF3-203ENST00000438862 ST7Q9NRC1 585 aa11.26□□□□□ -0.61
CSTF3-203ENST00000438862 DKK3Q9UBP4 350 aa11.26□□□□□ -0.61
CSTF3-203ENST00000438862 KLQ9UEF7 1012 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms