RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 EID3Q8N140 333 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 CRYBG2Q8N1P7 616 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 PCYT2Q99447 389 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 RHOBTB2Q9BYZ6 727 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 ZNF556Q9HAH1 456 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 PARVBQ9HBI1 364 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 TLR8Q9NR97 1041 aaKnown RBP6.72□□□□□ -1.33
CSDE1-205ENST00000438362 MPP6Q9NZW5 540 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 ATP11BQ9Y2G3 1177 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 TCAF1Q9Y4C2 921 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 PCDHB5Q9Y5E4 795 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 TRPV2Q9Y5S1 764 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 SMIM35A0A1B0GVV1 85 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 ZNF487B1APH4 448 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 ADCY6O43306 1168 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 USP2O75604 605 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-205ENST00000438362 ITGALP20701 1170 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 YWHAQP27348 245 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 PSMD7P51665 324 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 KPNA1P52294 538 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-205ENST00000438362 CRYBB1P53674 252 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-205ENST00000438362 DAOAP59103 153 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 EPS8Q12929 822 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 MAD2L1Q13257 205 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-205ENST00000438362 HERC3Q15034 1050 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 FSCN1Q16658 493 aaKnown RBP6.72□□□□□ -1.33
CSDE1-205ENST00000438362 PPM1LQ5SGD2 360 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 GPR107Q5VW38 600 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 EPGNQ6UW88 154 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 IL27RAQ6UWB1 636 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 MOB2Q70IA6 237 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 ADGRG6Q86SQ4 1221 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 C8orf59Q8N0T1 100 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-205ENST00000438362 HEXDCQ8WVB3 486 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 LRTOMTQ8WZ04 291 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 DACT3Q96B18 629 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-205ENST00000438362 C19orf60Q96EN9 201 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 PGLYRP2Q96PD5 576 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 ZYG11BQ9C0D3 744 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 EPS8L2Q9H6S3 715 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 ACTR8Q9H981 624 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 DDX28Q9NUL7 540 aaKnown RBP6.72□□□□□ -1.33
CSDE1-205ENST00000438362 UXTQ9UBK9 157 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-205ENST00000438362 CPA4Q9UI42 421 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 ZNF112Q9UJU3 913 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 FADS3Q9Y5Q0 445 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 COL2A1P02458 1487 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-205ENST00000438362 YJEFN3A6XGL0 299 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 RAD51BO15315 384 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 HS6ST1O60243 411 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 ENDOD1O94919 500 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 MLYCDO95822 493 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 KRT6AP02538 564 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 ALDOAP04075 364 aaKnown RBP6.72□□□□□ -1.33
CSDE1-205ENST00000438362 KRT6BP04259 564 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 LINC00032P0C843 101 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 KRT6CP48668 564 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 GALK1P51570 392 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 RPL26P61254 145 aaKnown RBP6.72□□□□□ -1.33
CSDE1-205ENST00000438362 BEX3Q00994 111 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 ZNF460Q14592 562 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 LPIN1Q14693 890 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 SLC39A12Q504Y0 691 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 REP15Q6BDI9 236 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 SCIMPQ6UWF3 145 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 MILR1Q7Z6M3 343 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 KIAA2013Q8IYS2 634 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 AHI1Q8N157 1196 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 ZCCHC7Q8N3Z6 543 aaKnown RBP6.72□□□□□ -1.33
CSDE1-205ENST00000438362 DQX1Q8TE96 717 aaKnown RBP6.72□□□□□ -1.33
CSDE1-205ENST00000438362 C1orf50Q9BV19 199 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 COQ10BQ9H8M1 238 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 VRTNQ9H8Y1 702 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 MARCH2Q9P0N8 246 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 SFMBT1Q9UHJ3 866 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 FBXW11Q9UKB1 542 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 SLC13A4Q9UKG4 626 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 PHLPP1O60346 1717 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 CFAP99D6REC4 459 aa6.71□□□□□ -1.33
CSDE1-205ENST00000438362 KPNA4O00629 521 aaPredicted RBP6.71□□□□□ -1.33
CSDE1-205ENST00000438362 PPEF2O14830 753 aa6.71□□□□□ -1.33
CSDE1-205ENST00000438362 KPNA6O60684 536 aa6.71□□□□□ -1.33
CSDE1-205ENST00000438362 GUCA1CO95843 209 aa6.71□□□□□ -1.33
CSDE1-205ENST00000438362 PIRTP0C851 137 aa6.71□□□□□ -1.33
CSDE1-205ENST00000438362 FGFR1P11362 822 aa6.71□□□□□ -1.33
CSDE1-205ENST00000438362 PSMB9P28065 219 aa6.71□□□□□ -1.33
CSDE1-205ENST00000438362 MAPK1P28482 360 aa6.71□□□□□ -1.33
CSDE1-205ENST00000438362 RPL9P32969 192 aaKnown RBP6.71□□□□□ -1.33
CSDE1-205ENST00000438362 EPHX2P34913 555 aa6.71□□□□□ -1.33
CSDE1-205ENST00000438362 DEFA1P59665 94 aa6.71□□□□□ -1.33
CSDE1-205ENST00000438362 DEFA3P59666 94 aa6.71□□□□□ -1.33
CSDE1-205ENST00000438362 NAA20P61599 178 aa6.71□□□□□ -1.33
CSDE1-205ENST00000438362 PTPRNQ16849 979 aa6.71□□□□□ -1.33
CSDE1-205ENST00000438362 BROXQ5VW32 411 aa6.71□□□□□ -1.33
CSDE1-205ENST00000438362 SYPL2Q5VXT5 272 aa6.71□□□□□ -1.33
CSDE1-205ENST00000438362 CLEC6AQ6EIG7 209 aa6.71□□□□□ -1.33
CSDE1-205ENST00000438362 ZNF280DQ6N043 979 aa6.71□□□□□ -1.33
CSDE1-205ENST00000438362 SZRD1Q7Z422 152 aa6.71□□□□□ -1.33
CSDE1-205ENST00000438362 SPPL2CQ8IUH8 684 aa6.71□□□□□ -1.33
CSDE1-205ENST00000438362 TBC1D21Q8IYX1 336 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms