RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 TBC1D30Q9Y2I9 924 aa10.56□□□□□ -0.72
CPNE1-214ENST00000435747 MAP4K5Q9Y4K4 846 aa10.56□□□□□ -0.72
CPNE1-214ENST00000435747 RNF215Q9Y6U7 377 aa10.56□□□□□ -0.72
CPNE1-214ENST00000435747 POLEQ07864 2286 aa10.55□□□□□ -0.72
CPNE1-214ENST00000435747 IGLV3-10A0A075B6K4 115 aa10.55□□□□□ -0.72
CPNE1-214ENST00000435747 TCP11X1B4DZS4 312 aa10.55□□□□□ -0.72
CPNE1-214ENST00000435747 M0QYT0 321 aa10.55□□□□□ -0.72
CPNE1-214ENST00000435747 FPGTO14772 594 aa10.55□□□□□ -0.72
CPNE1-214ENST00000435747 ALOX15BO15296 676 aa10.55□□□□□ -0.72
CPNE1-214ENST00000435747 PAGE1O75459 146 aa10.55□□□□□ -0.72
CPNE1-214ENST00000435747 LSM8O95777 96 aaKnown RBP10.55□□□□□ -0.72
CPNE1-214ENST00000435747 PAK4O96013 591 aaPredicted RBP10.55□□□□□ -0.72
CPNE1-214ENST00000435747 MMEP08473 750 aa10.55□□□□□ -0.72
CPNE1-214ENST00000435747 CCL4P13236 92 aa10.55□□□□□ -0.72
CPNE1-214ENST00000435747 TSHRP16473 764 aa10.55□□□□□ -0.72
CPNE1-214ENST00000435747 GGCXP38435 758 aa10.55□□□□□ -0.72
CPNE1-214ENST00000435747 ANP32AP39687 249 aaKnown RBP10.55□□□□□ -0.72
CPNE1-214ENST00000435747 NUMBP49757 651 aa10.55□□□□□ -0.72
CPNE1-214ENST00000435747 MC1RQ01726 317 aa10.55□□□□□ -0.72
CPNE1-214ENST00000435747 FMO1Q01740 532 aa10.55□□□□□ -0.72
CPNE1-214ENST00000435747 C16orf72Q14CZ0 275 aa10.55□□□□□ -0.72
CPNE1-214ENST00000435747 ACCSLQ4AC99 568 aa10.55□□□□□ -0.72
CPNE1-214ENST00000435747 C2CD6Q53TS8 623 aa10.55□□□□□ -0.72
CPNE1-214ENST00000435747 TPRG1LQ5T0D9 272 aa10.55□□□□□ -0.72
CPNE1-214ENST00000435747 SLITRK4Q8IW52 837 aa10.55□□□□□ -0.72
CPNE1-214ENST00000435747 MCEMP1Q8IX19 187 aa10.55□□□□□ -0.72
CPNE1-214ENST00000435747 TP53INP2Q8IXH6 220 aa10.55□□□□□ -0.72
CPNE1-214ENST00000435747 TMEM35BQ8NCS4 154 aa10.55□□□□□ -0.72
CPNE1-214ENST00000435747 PCDH19Q8TAB3 1148 aa10.55□□□□□ -0.72
CPNE1-214ENST00000435747 C18orf8Q96DM3 657 aa10.55□□□□□ -0.72
CPNE1-214ENST00000435747 FEM1AQ9BSK4 669 aa10.55□□□□□ -0.72
CPNE1-214ENST00000435747 SLC17A9Q9BYT1 436 aa10.55□□□□□ -0.72
CPNE1-214ENST00000435747 CLPBQ9H078 707 aa10.55□□□□□ -0.72
CPNE1-214ENST00000435747 DYRK4Q9NR20 520 aa10.55□□□□□ -0.72
CPNE1-214ENST00000435747 FANCLQ9NW38 375 aa10.55□□□□□ -0.72
CPNE1-214ENST00000435747 RRN3Q9NYV6 651 aa10.55□□□□□ -0.72
CPNE1-214ENST00000435747 KCTD3Q9Y597 815 aa10.55□□□□□ -0.72
CPNE1-214ENST00000435747 PCDHGA3Q9Y5H0 932 aa10.55□□□□□ -0.72
CPNE1-214ENST00000435747 DRGXA6NNA5 263 aa10.54□□□□□ -0.72
CPNE1-214ENST00000435747 KPNA3O00505 521 aaPredicted RBP10.54□□□□□ -0.72
CPNE1-214ENST00000435747 MCF2LO15068 1137 aa10.54□□□□□ -0.72
CPNE1-214ENST00000435747 RAD51BO15315 384 aa10.54□□□□□ -0.72
CPNE1-214ENST00000435747 ATP9BO43861 1147 aa10.54□□□□□ -0.72
CPNE1-214ENST00000435747 BNIP3LO60238 219 aa10.54□□□□□ -0.72
CPNE1-214ENST00000435747 ENDOD1O94919 500 aa10.54□□□□□ -0.72
CPNE1-214ENST00000435747 UNGP13051 313 aaPredicted RBP10.54□□□□□ -0.72
CPNE1-214ENST00000435747 PDGFRAP16234 1089 aa10.54□□□□□ -0.72
CPNE1-214ENST00000435747 TCN2P20062 427 aa10.54□□□□□ -0.72
CPNE1-214ENST00000435747 ARSDP51689 593 aa10.54□□□□□ -0.72
CPNE1-214ENST00000435747 THOP1P52888 689 aa10.54□□□□□ -0.72
CPNE1-214ENST00000435747 SULT2A1Q06520 285 aa10.54□□□□□ -0.72
CPNE1-214ENST00000435747 PTP4A2Q12974 167 aa10.54□□□□□ -0.72
CPNE1-214ENST00000435747 NME3Q13232 169 aa10.54□□□□□ -0.72
CPNE1-214ENST00000435747 MTA1Q13330 715 aa10.54□□□□□ -0.72
CPNE1-214ENST00000435747 PTK2BQ14289 1009 aa10.54□□□□□ -0.72
CPNE1-214ENST00000435747 SLC25A52Q3SY17 297 aa10.54□□□□□ -0.72
CPNE1-214ENST00000435747 MAP9Q49MG5 647 aa10.54□□□□□ -0.72
CPNE1-214ENST00000435747 TMEM259Q4ZIN3 620 aa10.54□□□□□ -0.72
CPNE1-214ENST00000435747 RAB6CQ53S08 254 aa10.54□□□□□ -0.72
CPNE1-214ENST00000435747 ALFQ53S48 1182 aa10.54□□□□□ -0.72
CPNE1-214ENST00000435747 EFHC2Q5JST6 749 aa10.54□□□□□ -0.72
CPNE1-214ENST00000435747 BRMS1LQ5PSV4 323 aa10.54□□□□□ -0.72
CPNE1-214ENST00000435747 RABGAP1LQ5R372 815 aa10.54□□□□□ -0.72
CPNE1-214ENST00000435747 FAXCQ5TGI0 409 aa10.54□□□□□ -0.72
CPNE1-214ENST00000435747 TAF3Q5VWG9 929 aa10.54□□□□□ -0.72
CPNE1-214ENST00000435747 C16orf46Q6P387 395 aa10.54□□□□□ -0.72
CPNE1-214ENST00000435747 SLC20A1Q8WUM9 679 aa10.54□□□□□ -0.72
CPNE1-214ENST00000435747 PMEPA1Q969W9 287 aa10.54□□□□□ -0.72
CPNE1-214ENST00000435747 C1orf74Q96LT6 269 aa10.54□□□□□ -0.72
CPNE1-214ENST00000435747 TBCBQ99426 244 aa10.54□□□□□ -0.72
CPNE1-214ENST00000435747 PSMB7Q99436 277 aa10.54□□□□□ -0.72
CPNE1-214ENST00000435747 TKTL2Q9H0I9 626 aa10.54□□□□□ -0.72
CPNE1-214ENST00000435747 RAB6CQ9H0N0 254 aa10.54□□□□□ -0.72
CPNE1-214ENST00000435747 VPS16Q9H269 839 aa10.54□□□□□ -0.72
CPNE1-214ENST00000435747 SEMA6CQ9H3T2 930 aa10.54□□□□□ -0.72
CPNE1-214ENST00000435747 RUBCNLQ9H714 662 aa10.54□□□□□ -0.72
CPNE1-214ENST00000435747 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.54□□□□□ -0.72
CPNE1-214ENST00000435747 LIMA1Q9UHB6 759 aaKnown RBP10.54□□□□□ -0.72
CPNE1-214ENST00000435747 VANGL2Q9ULK5 521 aa10.54□□□□□ -0.72
CPNE1-214ENST00000435747 ENTPD4Q9Y227 616 aa10.54□□□□□ -0.72
CPNE1-214ENST00000435747 SLC5A6Q9Y289 635 aa10.54□□□□□ -0.72
CPNE1-214ENST00000435747 KCNMB2Q9Y691 235 aa10.54□□□□□ -0.72
CPNE1-214ENST00000435747 ARHGEF17Q96PE2 2063 aaPredicted RBP10.54□□□□□ -0.72
CPNE1-214ENST00000435747 SYNJ2BP-COX16A0A087WUM0 186 aa10.53□□□□□ -0.72
CPNE1-214ENST00000435747 CLDN11O75508 207 aa10.53□□□□□ -0.72
CPNE1-214ENST00000435747 CELA2BP08218 269 aaPredicted RBP10.53□□□□□ -0.72
CPNE1-214ENST00000435747 MMP8P22894 467 aa10.53□□□□□ -0.72
CPNE1-214ENST00000435747 CDH4P55283 916 aa10.53□□□□□ -0.72
CPNE1-214ENST00000435747 GSCP56915 257 aaPredicted RBP10.53□□□□□ -0.72
CPNE1-214ENST00000435747 SNX16P57768 344 aa10.53□□□□□ -0.72
CPNE1-214ENST00000435747 RPS21P63220 83 aaKnown RBP10.53□□□□□ -0.72
CPNE1-214ENST00000435747 CDR2Q01850 454 aa10.53□□□□□ -0.72
CPNE1-214ENST00000435747 ELOCQ15369 112 aa10.53□□□□□ -0.72
CPNE1-214ENST00000435747 ATP1A1-AS1Q5TC04 95 aa10.53□□□□□ -0.72
CPNE1-214ENST00000435747 KIAA1161Q6NSJ0 714 aa10.53□□□□□ -0.72
CPNE1-214ENST00000435747 LVRNQ6Q4G3 990 aa10.53□□□□□ -0.72
CPNE1-214ENST00000435747 Q6ZVU0 165 aa10.53□□□□□ -0.72
CPNE1-214ENST00000435747 ZNF677Q86XU0 584 aa10.53□□□□□ -0.72
CPNE1-214ENST00000435747 FSTL5Q8N475 847 aaPredicted RBP10.53□□□□□ -0.72
CPNE1-214ENST00000435747 CCDC112Q8NEF3 446 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms