RNA–Protein interactions for RNA: ENST00000434476.6

SCRN1-207, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-207ENST00000434476 GOLGA8NF8WBI6 632 aa13.28□□□□□ -0.28
SCRN1-207ENST00000434476 KIF3CO14782 793 aa13.28□□□□□ -0.28
SCRN1-207ENST00000434476 DCXO43602 365 aa13.28□□□□□ -0.28
SCRN1-207ENST00000434476 KDELR3O43731 214 aa13.28□□□□□ -0.28
SCRN1-207ENST00000434476 ZBTB14O43829 449 aa13.28□□□□□ -0.28
SCRN1-207ENST00000434476 CLDN11O75508 207 aa13.28□□□□□ -0.28
SCRN1-207ENST00000434476 LUC7L3O95232 432 aaKnown RBP13.28□□□□□ -0.28
SCRN1-207ENST00000434476 WISP3O95389 354 aaPredicted RBP13.28□□□□□ -0.28
SCRN1-207ENST00000434476 NDST3O95803 873 aa13.28□□□□□ -0.28
SCRN1-207ENST00000434476 CXCL10P02778 98 aa13.28□□□□□ -0.28
SCRN1-207ENST00000434476 SERPINF2P08697 491 aa13.28□□□□□ -0.28
SCRN1-207ENST00000434476 ETFBP38117 255 aa13.28□□□□□ -0.28
SCRN1-207ENST00000434476 KCNQ1P51787 676 aa13.28□□□□□ -0.28
SCRN1-207ENST00000434476 GALNT1Q10472 559 aaPredicted RBP13.28□□□□□ -0.28
SCRN1-207ENST00000434476 ZNF460Q14592 562 aa13.28□□□□□ -0.28
SCRN1-207ENST00000434476 HERC3Q15034 1050 aa13.28□□□□□ -0.28
SCRN1-207ENST00000434476 HECTD3Q5T447 861 aa13.28□□□□□ -0.28
SCRN1-207ENST00000434476 RBM20Q5T481 1227 aaKnown RBP13.28□□□□□ -0.28
SCRN1-207ENST00000434476 FAM45BPQ6NSW5 357 aa13.28□□□□□ -0.28
SCRN1-207ENST00000434476 MRNIPQ6NTE8 343 aa13.28□□□□□ -0.28
SCRN1-207ENST00000434476 PRSS55Q6UWB4 352 aaPredicted RBP13.28□□□□□ -0.28
SCRN1-207ENST00000434476 RIPOR1Q6ZS17 1223 aa13.28□□□□□ -0.28
SCRN1-207ENST00000434476 TRIM67Q6ZTA4 783 aa13.28□□□□□ -0.28
SCRN1-207ENST00000434476 CIR1Q86X95 450 aaPredicted RBP13.28□□□□□ -0.28
SCRN1-207ENST00000434476 AFAP1L2Q8N4X5 818 aa13.28□□□□□ -0.28
SCRN1-207ENST00000434476 RP9Q8TA86 221 aaKnown RBP13.28□□□□□ -0.28
SCRN1-207ENST00000434476 FAM45AQ8TCE6 357 aa13.28□□□□□ -0.28
SCRN1-207ENST00000434476 NAF1Q96HR8 494 aaKnown RBP13.28□□□□□ -0.28
SCRN1-207ENST00000434476 ZNF570Q96NI8 536 aa13.28□□□□□ -0.28
SCRN1-207ENST00000434476 PANX3Q96QZ0 392 aa13.28□□□□□ -0.28
SCRN1-207ENST00000434476 OR52B2Q96RD2 323 aa13.28□□□□□ -0.28
SCRN1-207ENST00000434476 OLFM1Q99784 485 aa13.28□□□□□ -0.28
SCRN1-207ENST00000434476 MGME1Q9BQP7 344 aa13.28□□□□□ -0.28
SCRN1-207ENST00000434476 YY1AP1Q9H869 796 aa13.28□□□□□ -0.28
SCRN1-207ENST00000434476 EML4Q9HC35 981 aaKnown RBP13.28□□□□□ -0.28
SCRN1-207ENST00000434476 GPBP1L1Q9HC44 474 aaPredicted RBP13.28□□□□□ -0.28
SCRN1-207ENST00000434476 CDYLQ9Y232 598 aa13.28□□□□□ -0.28
SCRN1-207ENST00000434476 ARIH1Q9Y4X5 557 aaPredicted RBP13.28□□□□□ -0.28
SCRN1-207ENST00000434476 VWA8A3KMH1 1905 aa13.28□□□□□ -0.28
SCRN1-207ENST00000434476 ILVBLA1L0T0 632 aa13.27□□□□□ -0.29
SCRN1-207ENST00000434476 ZNF840PA6NDX5 716 aa13.27□□□□□ -0.29
SCRN1-207ENST00000434476 VGLL3A8MV65 326 aa13.27□□□□□ -0.29
SCRN1-207ENST00000434476 E9PBE3 544 aa13.27□□□□□ -0.29
SCRN1-207ENST00000434476 AURKAO14965 403 aa13.27□□□□□ -0.29
SCRN1-207ENST00000434476 NVLO15381 856 aaKnown RBP13.27□□□□□ -0.29
SCRN1-207ENST00000434476 KLHL41O60662 606 aa13.27□□□□□ -0.29
SCRN1-207ENST00000434476 FKTNO75072 461 aa13.27□□□□□ -0.29
SCRN1-207ENST00000434476 TBX10O75333 385 aa13.27□□□□□ -0.29
SCRN1-207ENST00000434476 RPP40O75818 363 aaKnown RBP13.27□□□□□ -0.29
SCRN1-207ENST00000434476 GLP2RO95838 553 aa13.27□□□□□ -0.29
SCRN1-207ENST00000434476 ATP6V1C1P21283 382 aa13.27□□□□□ -0.29
SCRN1-207ENST00000434476 PSMA3P25788 255 aa13.27□□□□□ -0.29
SCRN1-207ENST00000434476 ALDH7A1P49419 539 aaKnown RBP13.27□□□□□ -0.29
SCRN1-207ENST00000434476 AP2B1P63010 937 aa13.27□□□□□ -0.29
SCRN1-207ENST00000434476 SLC25A3Q00325 362 aa13.27□□□□□ -0.29
SCRN1-207ENST00000434476 SATB1Q01826 763 aa13.27□□□□□ -0.29
SCRN1-207ENST00000434476 CSHL1Q14406 222 aa13.27□□□□□ -0.29
SCRN1-207ENST00000434476 LSM12Q3MHD2 195 aaKnown RBP13.27□□□□□ -0.29
SCRN1-207ENST00000434476 ZNF789Q5FWF6 425 aa13.27□□□□□ -0.29
SCRN1-207ENST00000434476 SH2D4BQ5SQS7 431 aa13.27□□□□□ -0.29
SCRN1-207ENST00000434476 C1orf146Q5VVC0 180 aa13.27□□□□□ -0.29
SCRN1-207ENST00000434476 CHST9Q7L1S5 443 aa13.27□□□□□ -0.29
SCRN1-207ENST00000434476 PTAR1Q7Z6K3 402 aaPredicted RBP13.27□□□□□ -0.29
SCRN1-207ENST00000434476 SDCCAG8Q86SQ7 713 aaPredicted RBP13.27□□□□□ -0.29
SCRN1-207ENST00000434476 PHTF2Q8N3S3 785 aa13.27□□□□□ -0.29
SCRN1-207ENST00000434476 POU5F2Q8N7G0 328 aa13.27□□□□□ -0.29
SCRN1-207ENST00000434476 CCNYL1Q8N7R7 359 aa13.27□□□□□ -0.29
SCRN1-207ENST00000434476 KDM1BQ8NB78 822 aa13.27□□□□□ -0.29
SCRN1-207ENST00000434476 TXNDC5Q8NBS9 432 aaKnown RBP13.27□□□□□ -0.29
SCRN1-207ENST00000434476 BCL7CQ8WUZ0 217 aaPredicted RBP13.27□□□□□ -0.29
SCRN1-207ENST00000434476 MYEOVQ96EZ4 313 aa13.27□□□□□ -0.29
SCRN1-207ENST00000434476 PSKH2Q96QS6 385 aa13.27□□□□□ -0.29
SCRN1-207ENST00000434476 TRMOQ9BU70 441 aa13.27□□□□□ -0.29
SCRN1-207ENST00000434476 NACA2Q9H009 215 aa13.27□□□□□ -0.29
SCRN1-207ENST00000434476 ZNF385DQ9H6B1 395 aa13.27□□□□□ -0.29
SCRN1-207ENST00000434476 POPDC3Q9HBV1 291 aa13.27□□□□□ -0.29
SCRN1-207ENST00000434476 MAN1C1Q9NR34 630 aa13.27□□□□□ -0.29
SCRN1-207ENST00000434476 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.27□□□□□ -0.29
SCRN1-207ENST00000434476 AFF4Q9UHB7 1163 aaKnown RBP13.27□□□□□ -0.29
SCRN1-207ENST00000434476 SSX2IPQ9Y2D8 614 aa13.27□□□□□ -0.29
SCRN1-207ENST00000434476 DOCK4Q8N1I0 1966 aa13.26□□□□□ -0.29
SCRN1-207ENST00000434476 TTC3P53804 2025 aa13.26□□□□□ -0.29
SCRN1-207ENST00000434476 H3BNC9 293 aa13.26□□□□□ -0.29
SCRN1-207ENST00000434476 MUSKO15146 869 aa13.26□□□□□ -0.29
SCRN1-207ENST00000434476 CD3EAPO15446 510 aaKnown RBP13.26□□□□□ -0.29
SCRN1-207ENST00000434476 IPO13O94829 963 aaKnown RBP13.26□□□□□ -0.29
SCRN1-207ENST00000434476 CRTAMO95727 393 aa13.26□□□□□ -0.29
SCRN1-207ENST00000434476 CCDC166P0CW27 439 aa13.26□□□□□ -0.29
SCRN1-207ENST00000434476 ACADSP16219 412 aa13.26□□□□□ -0.29
SCRN1-207ENST00000434476 ITGAXP20702 1163 aa13.26□□□□□ -0.29
SCRN1-207ENST00000434476 OGNP20774 298 aaKnown RBP13.26□□□□□ -0.29
SCRN1-207ENST00000434476 HOXD9P28356 352 aaPredicted RBP13.26□□□□□ -0.29
SCRN1-207ENST00000434476 SLC6A4P31645 630 aa13.26□□□□□ -0.29
SCRN1-207ENST00000434476 OR1D2P34982 312 aa13.26□□□□□ -0.29
SCRN1-207ENST00000434476 PPP3CCP48454 512 aa13.26□□□□□ -0.29
SCRN1-207ENST00000434476 ARSDP51689 593 aa13.26□□□□□ -0.29
SCRN1-207ENST00000434476 PGGT1BP53609 377 aa13.26□□□□□ -0.29
SCRN1-207ENST00000434476 OXCT1P55809 520 aa13.26□□□□□ -0.29
SCRN1-207ENST00000434476 NSUN2Q08J23 767 aaKnown RBP eCLIP13.26□□□□□ -0.29
SCRN1-207ENST00000434476 TCTN1Q2MV58 587 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms