RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 SLC10A7Q0GE19 358 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 FASTKQ14296 549 aaKnown RBP11.88□□□□□ -0.51
CD44-209ENST00000433892 IHHQ14623 411 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 C11orf91Q3C1V1 193 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 PIK3R6Q5UE93 754 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 SDHAF4Q5VUM1 108 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 IL23RQ5VWK5 629 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 KLC3Q6P597 504 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 CHSY3Q70JA7 882 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 THEM5Q8N1Q8 247 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 ADCY4Q8NFM4 1077 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 OR13J1Q8NGT2 312 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 OR6P1Q8NGX9 317 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 SH3RF2Q8TEC5 729 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 ATP6V1E2Q96A05 226 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 PABPC5Q96DU9 382 aaKnown RBP11.88□□□□□ -0.51
CD44-209ENST00000433892 EML4Q9HC35 981 aaKnown RBP11.88□□□□□ -0.51
CD44-209ENST00000433892 SPON1Q9HCB6 807 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 CACNA2D2Q9NY47 1150 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 APPL1Q9UKG1 709 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 RAB26Q9ULW5 256 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 HTTP42858 3142 aa11.87□□□□□ -0.51
CD44-209ENST00000433892 ATP6AP2A0A1C7CYW4 349 aa11.87□□□□□ -0.51
CD44-209ENST00000433892 IQCA1LA6NCM1 817 aa11.87□□□□□ -0.51
CD44-209ENST00000433892 FBP2O00757 339 aa11.87□□□□□ -0.51
CD44-209ENST00000433892 UBFD1O14562 309 aaKnown RBP11.87□□□□□ -0.51
CD44-209ENST00000433892 ATP6AP2O75787 350 aa11.87□□□□□ -0.51
CD44-209ENST00000433892 HAPLN1P10915 354 aaPredicted RBP11.87□□□□□ -0.51
CD44-209ENST00000433892 YWHAQP27348 245 aa11.87□□□□□ -0.51
CD44-209ENST00000433892 KCNC1P48547 511 aa11.87□□□□□ -0.51
CD44-209ENST00000433892 CLCN5P51795 746 aa11.87□□□□□ -0.51
CD44-209ENST00000433892 CDKN2DP55273 166 aa11.87□□□□□ -0.51
CD44-209ENST00000433892 CDKL1Q00532 357 aa11.87□□□□□ -0.51
CD44-209ENST00000433892 DSC2Q02487 901 aa11.87□□□□□ -0.51
CD44-209ENST00000433892 RALGDSQ12967 914 aa11.87□□□□□ -0.51
CD44-209ENST00000433892 RBBP5Q15291 538 aaKnown RBP11.87□□□□□ -0.51
CD44-209ENST00000433892 MAPRE1Q15691 268 aaKnown RBP11.87□□□□□ -0.51
CD44-209ENST00000433892 HECTD2Q5U5R9 776 aa11.87□□□□□ -0.51
CD44-209ENST00000433892 CLEC6AQ6EIG7 209 aa11.87□□□□□ -0.51
CD44-209ENST00000433892 PAOXQ6QHF9 649 aa11.87□□□□□ -0.51
CD44-209ENST00000433892 TMEM207Q6UWW9 146 aa11.87□□□□□ -0.51
CD44-209ENST00000433892 PIM3Q86V86 326 aa11.87□□□□□ -0.51
CD44-209ENST00000433892 ZNF354CQ86Y25 554 aa11.87□□□□□ -0.51
CD44-209ENST00000433892 CILP2Q8IUL8 1156 aa11.87□□□□□ -0.51
CD44-209ENST00000433892 TMEM126BQ8IUX1 230 aa11.87□□□□□ -0.51
CD44-209ENST00000433892 CATSPER1Q8NEC5 780 aa11.87□□□□□ -0.51
CD44-209ENST00000433892 CALML6Q8TD86 181 aa11.87□□□□□ -0.51
CD44-209ENST00000433892 NAT14Q8WUY8 206 aa11.87□□□□□ -0.51
CD44-209ENST00000433892 NCSTNQ92542 709 aa11.87□□□□□ -0.51
CD44-209ENST00000433892 ASB9Q96DX5 294 aa11.87□□□□□ -0.51
CD44-209ENST00000433892 CCDC126Q96EE4 140 aa11.87□□□□□ -0.51
CD44-209ENST00000433892 HMCESQ96FZ2 354 aa11.87□□□□□ -0.51
CD44-209ENST00000433892 IMP4Q96G21 291 aaKnown RBP11.87□□□□□ -0.51
CD44-209ENST00000433892 UBXN10Q96LJ8 280 aa11.87□□□□□ -0.51
CD44-209ENST00000433892 ALG9Q9H6U8 611 aa11.87□□□□□ -0.51
CD44-209ENST00000433892 MEAF6Q9HAF1 191 aa11.87□□□□□ -0.51
CD44-209ENST00000433892 ARNT2Q9HBZ2 717 aa11.87□□□□□ -0.51
CD44-209ENST00000433892 UTP6Q9NYH9 597 aaKnown RBP11.87□□□□□ -0.51
CD44-209ENST00000433892 EPS15L1Q9UBC2 864 aa11.87□□□□□ -0.51
CD44-209ENST00000433892 DSEQ9UL01 958 aa11.87□□□□□ -0.51
CD44-209ENST00000433892 VWA7Q9Y334 891 aa11.87□□□□□ -0.51
CD44-209ENST00000433892 MYOCOSA0A1B0GUC4 107 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 OR51F1A6NGY5 319 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 GPC4O75487 556 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 THPOP40225 353 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 RAB27AP51159 221 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 RENBPP51606 427 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 ARSDP51689 593 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 STX5Q13190 355 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 LRP8Q14114 963 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 TRIM25Q14258 630 aaKnown RBP11.86□□□□□ -0.51
CD44-209ENST00000433892 SQLEQ14534 574 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 GPR158Q5T848 1215 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 REP15Q6BDI9 236 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 LAYNQ6UX15 382 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 AFAP1L2Q8N4X5 818 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 TMEM102Q8N9M5 508 aaPredicted RBP11.86□□□□□ -0.51
CD44-209ENST00000433892 OR9I1Q8NGQ6 314 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 HDAC10Q969S8 669 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 FAR2Q96K12 515 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 SYT17Q9BSW7 474 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 MTG1Q9BT17 334 aaPredicted RBP11.86□□□□□ -0.51
CD44-209ENST00000433892 SEMA6AQ9H2E6 1030 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 LZTS1Q9Y250 596 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 TRAF6Q9Y4K3 522 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 PRORSD1PA6NEY8 169 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 CNTN5O94779 1100 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 SUPT7LO94864 414 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 CLPTM1O96005 669 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 TFAP2AP05549 437 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 RBP1P09455 135 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 TUSC3Q13454 348 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 ACAP2Q15057 778 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 SLC39A12Q504Y0 691 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 ALFQ53S48 1182 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 MARC1Q5VT66 337 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 AP1ARQ63HQ0 302 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 IL31Q6EBC2 164 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 IYDQ6PHW0 289 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 SERINC5Q86VE9 423 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms