RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 C2orf78A6NCI8 922 aa14.74□□□□□ -0.05
RFTN1-203ENST00000432519 ACSL4O60488 711 aa14.74□□□□□ -0.05
RFTN1-203ENST00000432519 IRF1P10914 325 aa14.74□□□□□ -0.05
RFTN1-203ENST00000432519 ATP5C1P36542 298 aaKnown RBP14.74□□□□□ -0.05
RFTN1-203ENST00000432519 CCNG1P51959 295 aa14.74□□□□□ -0.05
RFTN1-203ENST00000432519 TIAL1Q01085 375 aaKnown RBP eCLIP14.74□□□□□ -0.05
RFTN1-203ENST00000432519 HECTD2Q5U5R9 776 aa14.74□□□□□ -0.05
RFTN1-203ENST00000432519 ZNF549Q6P9A3 640 aa14.74□□□□□ -0.05
RFTN1-203ENST00000432519 TSNARE1Q96NA8 513 aa14.74□□□□□ -0.05
RFTN1-203ENST00000432519 RANBP9Q96S59 729 aa14.74□□□□□ -0.05
RFTN1-203ENST00000432519 POLR1EQ9GZS1 481 aaKnown RBP14.74□□□□□ -0.05
RFTN1-203ENST00000432519 POMKQ9H5K3 350 aa14.74□□□□□ -0.05
RFTN1-203ENST00000432519 FIS1Q9Y3D6 152 aa14.74□□□□□ -0.05
RFTN1-203ENST00000432519 SPO11Q9Y5K1 396 aa14.74□□□□□ -0.05
RFTN1-203ENST00000432519 CHD7Q9P2D1 2997 aa14.74□□□□□ -0.05
RFTN1-203ENST00000432519 PITPNM1O00562 1244 aa14.74□□□□□ -0.05
RFTN1-203ENST00000432519 EFEMP2O95967 443 aa14.74□□□□□ -0.05
RFTN1-203ENST00000432519 COL6A2P12110 1019 aa14.74□□□□□ -0.05
RFTN1-203ENST00000432519 TSPAN8P19075 237 aa14.74□□□□□ -0.05
RFTN1-203ENST00000432519 CRABP2P29373 138 aa14.74□□□□□ -0.05
RFTN1-203ENST00000432519 COPAP53621 1224 aa14.74□□□□□ -0.05
RFTN1-203ENST00000432519 POU4F1Q01851 419 aa14.74□□□□□ -0.05
RFTN1-203ENST00000432519 GNA12Q03113 381 aa14.74□□□□□ -0.05
RFTN1-203ENST00000432519 NSUN2Q08J23 767 aaKnown RBP eCLIP14.74□□□□□ -0.05
RFTN1-203ENST00000432519 KLF10Q13118 480 aa14.74□□□□□ -0.05
RFTN1-203ENST00000432519 ZNF235Q14590 738 aa14.74□□□□□ -0.05
RFTN1-203ENST00000432519 TECRLQ5HYJ1 363 aa14.74□□□□□ -0.05
RFTN1-203ENST00000432519 GPR158Q5T848 1215 aa14.74□□□□□ -0.05
RFTN1-203ENST00000432519 TMCO4Q5TGY1 634 aa14.74□□□□□ -0.05
RFTN1-203ENST00000432519 IL31Q6EBC2 164 aa14.74□□□□□ -0.05
RFTN1-203ENST00000432519 FAM117BQ6P1L5 589 aa14.74□□□□□ -0.05
RFTN1-203ENST00000432519 C16orf59Q7L2K0 433 aa14.74□□□□□ -0.05
RFTN1-203ENST00000432519 KDM1BQ8NB78 822 aa14.74□□□□□ -0.05
RFTN1-203ENST00000432519 RDH11Q8TC12 318 aa14.74□□□□□ -0.05
RFTN1-203ENST00000432519 PHF21BQ96EK2 531 aa14.74□□□□□ -0.05
RFTN1-203ENST00000432519 ZBED2Q9BTP6 218 aa14.74□□□□□ -0.05
RFTN1-203ENST00000432519 NACA2Q9H009 215 aa14.74□□□□□ -0.05
RFTN1-203ENST00000432519 GPAMQ9HCL2 828 aa14.74□□□□□ -0.05
RFTN1-203ENST00000432519 DNMT3LQ9UJW3 386 aa14.74□□□□□ -0.05
RFTN1-203ENST00000432519 SORCS3Q9UPU3 1222 aa14.74□□□□□ -0.05
RFTN1-203ENST00000432519 C5orf42Q9H799 3197 aa14.73□□□□□ -0.05
RFTN1-203ENST00000432519 HDAC3O15379 428 aa14.73□□□□□ -0.05
RFTN1-203ENST00000432519 GOT2P00505 430 aaKnown RBP14.73□□□□□ -0.05
RFTN1-203ENST00000432519 SLC4A1P02730 911 aa14.73□□□□□ -0.05
RFTN1-203ENST00000432519 APOA4P06727 396 aa14.73□□□□□ -0.05
RFTN1-203ENST00000432519 PDHA1P08559 390 aa14.73□□□□□ -0.05
RFTN1-203ENST00000432519 EPHB1P54762 984 aa14.73□□□□□ -0.05
RFTN1-203ENST00000432519 SLC12A2P55011 1212 aa14.73□□□□□ -0.05
RFTN1-203ENST00000432519 PRAMEP78395 509 aa14.73□□□□□ -0.05
RFTN1-203ENST00000432519 TNK2Q07912 1038 aa14.73□□□□□ -0.05
RFTN1-203ENST00000432519 NAA25Q14CX7 972 aa14.73□□□□□ -0.05
RFTN1-203ENST00000432519 TBCCQ15814 346 aa14.73□□□□□ -0.05
RFTN1-203ENST00000432519 TRIM67Q6ZTA4 783 aa14.73□□□□□ -0.05
RFTN1-203ENST00000432519 AUTS2Q8WXX7 1259 aa14.73□□□□□ -0.05
RFTN1-203ENST00000432519 N4BP2L2Q92802 583 aaPredicted RBP14.73□□□□□ -0.05
RFTN1-203ENST00000432519 PPP1R2P1Q96PQ5 205 aa14.73□□□□□ -0.05
RFTN1-203ENST00000432519 C1orf21Q9H246 121 aa14.73□□□□□ -0.05
RFTN1-203ENST00000432519 HIPK3Q9H422 1215 aa14.73□□□□□ -0.05
RFTN1-203ENST00000432519 CWH43Q9H720 699 aa14.73□□□□□ -0.05
RFTN1-203ENST00000432519 SMPD4Q9NXE4 827 aa14.73□□□□□ -0.05
RFTN1-203ENST00000432519 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.73□□□□□ -0.05
RFTN1-203ENST00000432519 MTRRQ9UBK8 725 aa14.73□□□□□ -0.05
RFTN1-203ENST00000432519 TRIM17Q9Y577 477 aa14.73□□□□□ -0.05
RFTN1-203ENST00000432519 CCDC162PA2VCL2 907 aa14.73□□□□□ -0.05
RFTN1-203ENST00000432519 H7C4K7 107 aa14.73□□□□□ -0.05
RFTN1-203ENST00000432519 ATP5BP06576 529 aaKnown RBP14.73□□□□□ -0.05
RFTN1-203ENST00000432519 ITGAXP20702 1163 aa14.73□□□□□ -0.05
RFTN1-203ENST00000432519 MAPKAPK2P49137 400 aa14.73□□□□□ -0.05
RFTN1-203ENST00000432519 ALDH7A1P49419 539 aaKnown RBP14.73□□□□□ -0.05
RFTN1-203ENST00000432519 YBEYP58557 167 aaPredicted RBP14.73□□□□□ -0.05
RFTN1-203ENST00000432519 SEL1L3Q68CR1 1132 aa14.73□□□□□ -0.05
RFTN1-203ENST00000432519 CCDC124Q96CT7 223 aaKnown RBP14.73□□□□□ -0.05
RFTN1-203ENST00000432519 UBXN10Q96LJ8 280 aa14.73□□□□□ -0.05
RFTN1-203ENST00000432519 SLC22A12Q96S37 553 aa14.73□□□□□ -0.05
RFTN1-203ENST00000432519 VWA7Q9Y334 891 aa14.73□□□□□ -0.05
RFTN1-203ENST00000432519 A8MT66 165 aa14.72□□□□□ -0.05
RFTN1-203ENST00000432519 SLC7A4O43246 635 aa14.72□□□□□ -0.05
RFTN1-203ENST00000432519 STC2O76061 302 aa14.72□□□□□ -0.05
RFTN1-203ENST00000432519 CORO1AP31146 461 aaKnown RBP14.72□□□□□ -0.05
RFTN1-203ENST00000432519 MAP2K2P36507 400 aa14.72□□□□□ -0.05
RFTN1-203ENST00000432519 VEGFBP49765 207 aa14.72□□□□□ -0.05
RFTN1-203ENST00000432519 SCNN1BP51168 640 aa14.72□□□□□ -0.05
RFTN1-203ENST00000432519 LINGO4Q6UY18 593 aa14.72□□□□□ -0.05
RFTN1-203ENST00000432519 KIAA0408Q6ZU52 694 aa14.72□□□□□ -0.05
RFTN1-203ENST00000432519 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.72□□□□□ -0.05
RFTN1-203ENST00000432519 IFT43Q96FT9 208 aa14.72□□□□□ -0.05
RFTN1-203ENST00000432519 CATSPER2Q96P56 530 aa14.72□□□□□ -0.05
RFTN1-203ENST00000432519 TRIB3Q96RU7 358 aa14.72□□□□□ -0.05
RFTN1-203ENST00000432519 MRPL57Q9BQC6 102 aaKnown RBP14.72□□□□□ -0.05
RFTN1-203ENST00000432519 MFSD1Q9H3U5 465 aa14.72□□□□□ -0.05
RFTN1-203ENST00000432519 SSX2IPQ9Y2D8 614 aa14.72□□□□□ -0.05
RFTN1-203ENST00000432519 PAPSS2O95340 614 aaPredicted RBP14.72□□□□□ -0.05
RFTN1-203ENST00000432519 WISP3O95389 354 aaPredicted RBP14.72□□□□□ -0.05
RFTN1-203ENST00000432519 COX4I1P13073 169 aa14.72□□□□□ -0.05
RFTN1-203ENST00000432519 ZXDBP98169 803 aa14.72□□□□□ -0.05
RFTN1-203ENST00000432519 ELAVL2Q12926 359 aaKnown RBP14.72□□□□□ -0.05
RFTN1-203ENST00000432519 CUL3Q13618 768 aa14.72□□□□□ -0.05
RFTN1-203ENST00000432519 TAF11Q15544 211 aa14.72□□□□□ -0.05
RFTN1-203ENST00000432519 SH2D4BQ5SQS7 431 aa14.72□□□□□ -0.05
RFTN1-203ENST00000432519 DEFB107AQ8IZN7 70 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms