RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 SPESP1Q6UW49 350 aa15.47■□□□□ 0.07
PTPRF-206ENST00000429895 LEMD2Q8NC56 503 aa15.47■□□□□ 0.07
PTPRF-206ENST00000429895 KLHL5Q96PQ7 755 aa15.47■□□□□ 0.07
PTPRF-206ENST00000429895 NEK6Q9HC98 313 aa15.47■□□□□ 0.07
PTPRF-206ENST00000429895 SLC15A5A6NIM6 579 aa15.47■□□□□ 0.07
PTPRF-206ENST00000429895 LIN7AO14910 233 aaPredicted RBP15.47■□□□□ 0.07
PTPRF-206ENST00000429895 GCATO75600 419 aa15.47■□□□□ 0.07
PTPRF-206ENST00000429895 SNRPB2P08579 225 aaKnown RBP15.47■□□□□ 0.07
PTPRF-206ENST00000429895 CYP2C18P33260 490 aa15.47■□□□□ 0.07
PTPRF-206ENST00000429895 BHLHB9Q6PI77 547 aa15.47■□□□□ 0.07
PTPRF-206ENST00000429895 C1orf186Q6ZWK4 172 aa15.47■□□□□ 0.07
PTPRF-206ENST00000429895 HPS6Q86YV9 775 aa15.47■□□□□ 0.07
PTPRF-206ENST00000429895 QKIQ96PU8 341 aaKnown RBP eCLIP15.47■□□□□ 0.07
PTPRF-206ENST00000429895 FAM198AQ9UFP1 575 aa15.47■□□□□ 0.07
PTPRF-206ENST00000429895 TMCO1Q9UM00 188 aa15.47■□□□□ 0.07
PTPRF-206ENST00000429895 PCDHB9Q9Y5E1 797 aa15.47■□□□□ 0.07
PTPRF-206ENST00000429895 PNMA8CA0A1B0GUJ8 204 aa15.47■□□□□ 0.07
PTPRF-206ENST00000429895 TLR5O60602 858 aa15.47■□□□□ 0.07
PTPRF-206ENST00000429895 ADH1CP00326 375 aa15.47■□□□□ 0.07
PTPRF-206ENST00000429895 GLUD1P00367 558 aa15.47■□□□□ 0.07
PTPRF-206ENST00000429895 HGFP14210 728 aa15.47■□□□□ 0.07
PTPRF-206ENST00000429895 UGT2B15P54855 530 aa15.47■□□□□ 0.07
PTPRF-206ENST00000429895 CAPSQ13938 189 aa15.47■□□□□ 0.07
PTPRF-206ENST00000429895 RAVER1Q8IY67 606 aaKnown RBP15.47■□□□□ 0.07
PTPRF-206ENST00000429895 MCMBPQ9BTE3 642 aa15.47■□□□□ 0.07
PTPRF-206ENST00000429895 PAPSS1O43252 624 aaPredicted RBP15.46■□□□□ 0.07
PTPRF-206ENST00000429895 TNFRSF21O75509 655 aa15.46■□□□□ 0.07
PTPRF-206ENST00000429895 PSMD8P48556 350 aa15.46■□□□□ 0.07
PTPRF-206ENST00000429895 RAB10P61026 200 aa15.46■□□□□ 0.07
PTPRF-206ENST00000429895 CAMK1Q14012 370 aa15.46■□□□□ 0.07
PTPRF-206ENST00000429895 MPPE1Q53F39 396 aa15.46■□□□□ 0.07
PTPRF-206ENST00000429895 GPR158Q5T848 1215 aa15.46■□□□□ 0.07
PTPRF-206ENST00000429895 DCLRE1AQ6PJP8 1040 aa15.46■□□□□ 0.07
PTPRF-206ENST00000429895 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.46■□□□□ 0.07
PTPRF-206ENST00000429895 CDH24Q86UP0 819 aa15.46■□□□□ 0.07
PTPRF-206ENST00000429895 PPP3R2Q96LZ3 170 aa15.46■□□□□ 0.07
PTPRF-206ENST00000429895 MRPL45Q9BRJ2 306 aaKnown RBP15.46■□□□□ 0.07
PTPRF-206ENST00000429895 TLR10Q9BXR5 811 aa15.46■□□□□ 0.07
PTPRF-206ENST00000429895 IDI2Q9BXS1 227 aa15.46■□□□□ 0.07
PTPRF-206ENST00000429895 MTF2Q9Y483 593 aaPredicted RBP15.46■□□□□ 0.07
PTPRF-206ENST00000429895 MEGF6O75095 1541 aa15.46■□□□□ 0.07
PTPRF-206ENST00000429895 MAFO75444 373 aaPredicted RBP15.46■□□□□ 0.07
PTPRF-206ENST00000429895 OR1D2P34982 312 aa15.46■□□□□ 0.07
PTPRF-206ENST00000429895 UBAP2LQ14157 1087 aaKnown RBP15.46■□□□□ 0.07
PTPRF-206ENST00000429895 PYDC2Q56P42 97 aa15.46■□□□□ 0.07
PTPRF-206ENST00000429895 PANX1Q96RD7 426 aa15.46■□□□□ 0.07
PTPRF-206ENST00000429895 SLC39A8Q9C0K1 460 aa15.46■□□□□ 0.07
PTPRF-206ENST00000429895 NRXN1Q9ULB1 1477 aa15.46■□□□□ 0.07
PTPRF-206ENST00000429895 FFAR2O15552 330 aa15.46■□□□□ 0.07
PTPRF-206ENST00000429895 LIASO43766 372 aa15.46■□□□□ 0.07
PTPRF-206ENST00000429895 OMPP47874 163 aa15.46■□□□□ 0.07
PTPRF-206ENST00000429895 TAS2R41P59536 307 aa15.46■□□□□ 0.07
PTPRF-206ENST00000429895 APLFQ8IW19 511 aaPredicted RBP15.46■□□□□ 0.07
PTPRF-206ENST00000429895 ATP6V1C2Q8NEY4 427 aa15.46■□□□□ 0.07
PTPRF-206ENST00000429895 EPS8L1Q8TE68 723 aa15.46■□□□□ 0.07
PTPRF-206ENST00000429895 CDADC1Q9BWV3 514 aa15.46■□□□□ 0.07
PTPRF-206ENST00000429895 HNRNPLP14866 589 aaKnown RBP eCLIP15.46■□□□□ 0.06
PTPRF-206ENST00000429895 LPOP22079 712 aaPredicted RBP15.46■□□□□ 0.06
PTPRF-206ENST00000429895 ATP5F1P24539 256 aaPredicted RBP15.46■□□□□ 0.06
PTPRF-206ENST00000429895 TPP2P29144 1249 aaPredicted RBP15.46■□□□□ 0.06
PTPRF-206ENST00000429895 PPIDQ08752 370 aaKnown RBP15.46■□□□□ 0.06
PTPRF-206ENST00000429895 KCTD19Q17RG1 926 aaPredicted RBP15.46■□□□□ 0.06
PTPRF-206ENST00000429895 ANKRD52Q8NB46 1076 aa15.46■□□□□ 0.06
PTPRF-206ENST00000429895 CNGB3Q9NQW8 809 aa15.46■□□□□ 0.06
PTPRF-206ENST00000429895 GDF3Q9NR23 364 aa15.46■□□□□ 0.06
PTPRF-206ENST00000429895 CIDEBQ9UHD4 219 aa15.46■□□□□ 0.06
PTPRF-206ENST00000429895 NCOA3Q9Y6Q9 1424 aa15.46■□□□□ 0.06
PTPRF-206ENST00000429895 SHBGP04278 402 aa15.46■□□□□ 0.06
PTPRF-206ENST00000429895 PCCBP05166 539 aa15.46■□□□□ 0.06
PTPRF-206ENST00000429895 ALAS2P22557 587 aa15.46■□□□□ 0.06
PTPRF-206ENST00000429895 TCEA1P23193 301 aaKnown RBP15.46■□□□□ 0.06
PTPRF-206ENST00000429895 DMPKQ09013 629 aa15.46■□□□□ 0.06
PTPRF-206ENST00000429895 SEMA5AQ13591 1074 aa15.46■□□□□ 0.06
PTPRF-206ENST00000429895 IKBIPQ70UQ0 350 aa15.46■□□□□ 0.06
PTPRF-206ENST00000429895 RNF157Q96PX1 679 aa15.46■□□□□ 0.06
PTPRF-206ENST00000429895 TNKS2Q9H2K2 1166 aa15.46■□□□□ 0.06
PTPRF-206ENST00000429895 PRDM12Q9H4Q4 367 aa15.46■□□□□ 0.06
PTPRF-206ENST00000429895 KCNK4Q9NYG8 393 aa15.46■□□□□ 0.06
PTPRF-206ENST00000429895 LEF1Q9UJU2 399 aaPredicted RBP15.46■□□□□ 0.06
PTPRF-206ENST00000429895 POLR3HQ9Y535 204 aaPredicted RBP15.46■□□□□ 0.06
PTPRF-206ENST00000429895 RPL22P35268 128 aaKnown RBP15.45■□□□□ 0.06
PTPRF-206ENST00000429895 UTS2BQ765I0 119 aa15.45■□□□□ 0.06
PTPRF-206ENST00000429895 ZNF540Q8NDQ6 660 aa15.45■□□□□ 0.06
PTPRF-206ENST00000429895 AARSD1Q9BTE6 412 aaKnown RBP15.45■□□□□ 0.06
PTPRF-206ENST00000429895 TLE6Q9H808 572 aa15.45■□□□□ 0.06
PTPRF-206ENST00000429895 ADAM28Q9UKQ2 775 aa15.45■□□□□ 0.06
PTPRF-206ENST00000429895 CAMSAP1Q5T5Y3 1602 aa15.45■□□□□ 0.06
PTPRF-206ENST00000429895 YDJCA8MPS7 323 aa15.45■□□□□ 0.06
PTPRF-206ENST00000429895 FAM25EA8MYX2 175 aa15.45■□□□□ 0.06
PTPRF-206ENST00000429895 SPIRE1Q08AE8 756 aa15.45■□□□□ 0.06
PTPRF-206ENST00000429895 ALLCQ8N6M5 410 aa15.45■□□□□ 0.06
PTPRF-206ENST00000429895 OR4L1Q8NH43 312 aa15.45■□□□□ 0.06
PTPRF-206ENST00000429895 WDR18Q9BV38 432 aa15.45■□□□□ 0.06
PTPRF-206ENST00000429895 POLE3Q9NRF9 147 aa15.45■□□□□ 0.06
PTPRF-206ENST00000429895 NPEPPSL1A6NEC2 478 aa15.45■□□□□ 0.06
PTPRF-206ENST00000429895 BIRC5O15392 142 aa15.45■□□□□ 0.06
PTPRF-206ENST00000429895 MSI1O43347 362 aaKnown RBP15.45■□□□□ 0.06
PTPRF-206ENST00000429895 OR5F1O95221 314 aa15.45■□□□□ 0.06
PTPRF-206ENST00000429895 CYP4B1P13584 511 aa15.45■□□□□ 0.06
PTPRF-206ENST00000429895 ITPKAP23677 461 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms