RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 C9orf16Q9BUW7 83 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 TRAF4Q9BUZ4 470 aaPredicted RBP8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 SP110Q9HB58 689 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 PCDH9Q9HC56 1237 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 SIRT5Q9NXA8 310 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 KCTD5Q9NXV2 234 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 WARS2Q9UGM6 360 aaKnown RBP8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 GTF2IRD1Q9UHL9 959 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 SPATA31A6Q5VVP1 1343 aa8.93□□□□□ -0.98
CDC42BPA-206ENST00000429440 TRIM49D1C9J1S8 452 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 FOXN3O00409 490 aaPredicted RBP8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 TRDMT1O14717 391 aaKnown RBP8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 PLD2O14939 933 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 ZBTB5O15062 677 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 SNX4O95219 450 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 TDP2O95551 362 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 ALAS2P22557 587 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 HTR1BP28222 390 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 LRPAP1P30533 357 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 SOX9P48436 509 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 ACOT2P49753 483 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 LETM2Q2VYF4 491 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 MTERF2Q49AM1 385 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 WDR44Q5JSH3 913 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 MBLAC2Q68D91 279 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 PMF1Q6P1K2 205 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 KCNK18Q7Z418 384 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 LRRTM3Q86VH5 581 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 AMIGO1Q86WK6 493 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 MICU2Q8IYU8 434 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 LRRC71Q8N4P6 559 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 CBR4Q8N4T8 237 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 KIAA1958Q8N8K9 716 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 OR13J1Q8NGT2 312 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 OR2T34Q8NGX1 318 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 SLC20A1Q8WUM9 679 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 PDXPQ96GD0 296 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 C2orf40Q9H1Z8 148 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 INTS7Q9NVH2 962 aaKnown RBP8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 ASNSD1Q9NWL6 643 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 KLF15Q9UIH9 416 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 MAN2B2Q9Y2E5 1009 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 PMF1-BGLAPU3KQ54 211 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 LRRC72A6NJI9 287 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 E7ENX8 843 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 UBAP1LF5GYI3 381 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 ONECUT3O60422 494 aaPredicted RBP8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 ZNF623O75123 536 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 RFPL1O75677 317 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 CCNE2O96020 404 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 SERPINE1P05121 402 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 IL1R1P14778 569 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 AXLP30530 894 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 ARHGDIBP52566 201 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 GAD2Q05329 585 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 SKIV2LQ15477 1246 aaKnown RBP8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 UGP2Q16851 508 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 PARP15Q460N3 678 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 RBM48Q5RL73 367 aaKnown RBP8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 EPGNQ6UW88 154 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 HEATR3Q7Z4Q2 680 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 USP37Q86T82 979 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 PPIL6Q8IXY8 311 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 METTL4Q8N3J2 472 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 GLIS1Q8NBF1 620 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 ZSCAN18Q8TBC5 510 aaPredicted RBP8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 DYNC2LI1Q8TCX1 351 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 PMM1Q92871 262 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 MUL1Q969V5 352 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 TMEM47Q9BQJ4 181 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 ZFP14Q9HCL3 533 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 PNPLA8Q9NP80 782 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 SLC35C2Q9NQQ7 365 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 MBD2Q9UBB5 411 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 TEKT2Q9UIF3 430 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 CNOT6Q9ULM6 557 aaKnown RBP8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 ANKRD31Q8N7Z5 1873 aa8.92□□□□□ -0.98
CDC42BPA-206ENST00000429440 A0A1W2PRG6 482 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 OR6C65A6NJZ3 312 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 H0YAE9 185 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 TLR3O15455 904 aaKnown RBP8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 CFLARO15519 480 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 TBX1O43435 398 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 TOP3BO95985 862 aaKnown RBP8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 PRKCBP05771 671 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 HOXD4P09016 255 aaPredicted RBP8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 WEE2P0C1S8 567 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 CBLP22681 906 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 F8A1P23610 371 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 ATP2B4P23634 1241 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 TYK2P29597 1187 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 EPHX2P34913 555 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 DPP6P42658 865 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 IL12RB1P42701 662 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 FMO5P49326 533 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 DBPQ10586 325 aaPredicted RBP8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 SEMA3BQ13214 749 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 CATSPEREQ5SY80 951 aa8.91□□□□□ -0.98
CDC42BPA-206ENST00000429440 ZBTB37Q5TC79 503 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms