RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 RASAL3Q86YV0 1011 aa12.86□□□□□ -0.35
LDB3-205ENST00000429277 CLP1Q92989 425 aaKnown RBP12.86□□□□□ -0.35
LDB3-205ENST00000429277 LRMDAQ9H2I8 198 aa12.86□□□□□ -0.35
LDB3-205ENST00000429277 MEIS2O14770 477 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 CLDN11O75508 207 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 LDOC1O95751 146 aaPredicted RBP12.85□□□□□ -0.35
LDB3-205ENST00000429277 S100GP29377 79 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 FMO1Q01740 532 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 PTGES3Q15185 160 aaKnown RBP12.85□□□□□ -0.35
LDB3-205ENST00000429277 XKR6Q5GH73 641 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 LIN54Q6MZP7 749 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 VSTM1Q6UX27 236 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 DENND1CQ8IV53 801 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 OR7A2PQ8NGA2 310 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 OR4L1Q8NH43 312 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 BAP1Q92560 729 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 DNAJC19Q96DA6 116 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 SENP6Q9GZR1 1112 aaPredicted RBP12.85□□□□□ -0.35
LDB3-205ENST00000429277 LMAN2LQ9H0V9 348 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 RNPEPQ9H4A4 650 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 C3orf14Q9HBI5 128 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 FAM198AQ9UFP1 575 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 IKZF3Q9UKT9 509 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 CTNNB1P35222 781 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 USP46P62068 366 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 SP3Q02447 781 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 TAPT1Q6NXT6 567 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 C16orf46Q6P387 395 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 CXCL17Q6UXB2 119 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 REM2Q8IYK8 340 aaPredicted RBP12.85□□□□□ -0.35
LDB3-205ENST00000429277 KLHL23Q8NBE8 558 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 UXS1Q8NBZ7 420 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.85□□□□□ -0.35
LDB3-205ENST00000429277 TBC1D14Q9P2M4 693 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 RAB23Q9ULC3 237 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 SMIM35A0A1B0GVV1 85 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 GSAPA4D1B5 854 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 ERCC2P18074 760 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 EPORP19235 508 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 NR1D2Q14995 579 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 B3GNT6Q6ZMB0 384 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 CXXC5Q7LFL8 322 aaKnown RBP12.85□□□□□ -0.35
LDB3-205ENST00000429277 RNF148Q8N7C7 305 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 HDAC7Q8WUI4 952 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 BRD9Q9H8M2 597 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 MAGEL2Q9UJ55 1249 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 LYVE1Q9Y5Y7 322 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 PEX11AO75192 247 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 HGFP14210 728 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 NR1H2P55055 460 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 DCTN2Q13561 401 aaKnown RBP12.85□□□□□ -0.35
LDB3-205ENST00000429277 CHSY3Q70JA7 882 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 APTXQ7Z2E3 356 aaKnown RBP12.85□□□□□ -0.35
LDB3-205ENST00000429277 PCDH20Q8N6Y1 951 aaKnown RBP12.85□□□□□ -0.35
LDB3-205ENST00000429277 HAS1Q92839 578 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 MFSD14AQ96MC6 490 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 CORO1BQ9BR76 489 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 PTPRHQ9HD43 1115 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 CMTM6Q9NX76 183 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 SH3GLB1Q9Y371 365 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 ZNF780BQ9Y6R6 833 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 RPTORQ8N122 1335 aa12.85□□□□□ -0.35
LDB3-205ENST00000429277 TGDSO95455 350 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 UGT1A5P35504 534 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 GRIA3P42263 894 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 ABL2P42684 1182 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 NUMBP49757 651 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 PRKAG1P54619 331 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 DLG4P78352 724 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 SMAD3P84022 425 aaKnown RBP12.84□□□□□ -0.35
LDB3-205ENST00000429277 GPAT3Q53EU6 434 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 KIAA1324Q6UXG2 1013 aaKnown RBP12.84□□□□□ -0.35
LDB3-205ENST00000429277 FAM35AQ86V20 835 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 HEATR4Q86WZ0 1026 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 HTATIP2Q9BUP3 242 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 RHBGQ9H310 441 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 MUC13Q9H3R2 512 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 EXD2Q9NVH0 621 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 ALOX15BO15296 676 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 PKNOX1P55347 436 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 RHBDL3P58872 404 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 RPL38P63173 70 aaKnown RBP12.84□□□□□ -0.35
LDB3-205ENST00000429277 TUSC3Q13454 348 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 SLC25A52Q3SY17 297 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 PARP15Q460N3 678 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 NAIF1Q69YI7 327 aaPredicted RBP12.84□□□□□ -0.35
LDB3-205ENST00000429277 PACS1Q6VY07 963 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 SPATA19Q7Z5L4 167 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 DNAAF5Q86Y56 855 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 ZSCAN18Q8TBC5 510 aaPredicted RBP12.84□□□□□ -0.35
LDB3-205ENST00000429277 MAGEE2Q8TD90 523 aaPredicted RBP12.84□□□□□ -0.35
LDB3-205ENST00000429277 S100ZQ8WXG8 99 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 OSBPL11Q9BXB4 747 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 IGFLR1Q9H665 355 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 SEMA3GQ9NS98 782 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 COMMD9Q9P000 198 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 IFNGP01579 166 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 MYL9P24844 172 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 GSSP48637 474 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 NOGQ13253 232 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms