RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 PES1O00541 588 aaKnown RBP18.47■□□□□ 0.55
UPK3BP1-201ENST00000428678 INSIG1O15503 277 aa18.47■□□□□ 0.55
UPK3BP1-201ENST00000428678 PRAMEF10O60809 474 aa18.47■□□□□ 0.55
UPK3BP1-201ENST00000428678 PIGNO95427 931 aa18.47■□□□□ 0.55
UPK3BP1-201ENST00000428678 PCCBP05166 539 aa18.47■□□□□ 0.55
UPK3BP1-201ENST00000428678 SUOXP51687 545 aa18.47■□□□□ 0.55
UPK3BP1-201ENST00000428678 VWA3BQ502W6 1294 aa18.47■□□□□ 0.55
UPK3BP1-201ENST00000428678 ATG14Q6ZNE5 492 aa18.47■□□□□ 0.55
UPK3BP1-201ENST00000428678 CCDC185Q8N715 623 aa18.47■□□□□ 0.55
UPK3BP1-201ENST00000428678 GPT2Q8TD30 523 aa18.47■□□□□ 0.55
UPK3BP1-201ENST00000428678 CASKIN2Q8WXE0 1202 aa18.47■□□□□ 0.55
UPK3BP1-201ENST00000428678 PDXPQ96GD0 296 aa18.47■□□□□ 0.55
UPK3BP1-201ENST00000428678 EXOC2Q96KP1 924 aa18.47■□□□□ 0.55
UPK3BP1-201ENST00000428678 WDR92Q96MX6 357 aa18.47■□□□□ 0.55
UPK3BP1-201ENST00000428678 KLC2Q9H0B6 622 aa18.47■□□□□ 0.55
UPK3BP1-201ENST00000428678 PCDH12Q9NPG4 1184 aa18.47■□□□□ 0.55
UPK3BP1-201ENST00000428678 MFHAS1Q9Y4C4 1052 aa18.47■□□□□ 0.55
UPK3BP1-201ENST00000428678 PCDHGA4Q9Y5G9 962 aa18.47■□□□□ 0.55
UPK3BP1-201ENST00000428678 TERTO14746 1132 aaKnown RBP18.46■□□□□ 0.55
UPK3BP1-201ENST00000428678 TNFP01375 233 aa18.46■□□□□ 0.55
UPK3BP1-201ENST00000428678 MAPK10P53779 464 aa18.46■□□□□ 0.55
UPK3BP1-201ENST00000428678 CAMK4Q16566 473 aa18.46■□□□□ 0.55
UPK3BP1-201ENST00000428678 KLHDC7AQ5VTJ3 777 aa18.46■□□□□ 0.55
UPK3BP1-201ENST00000428678 KCTD16Q68DU8 428 aa18.46■□□□□ 0.55
UPK3BP1-201ENST00000428678 ERAP2Q6P179 960 aa18.46■□□□□ 0.55
UPK3BP1-201ENST00000428678 ZFAND4Q86XD8 727 aa18.46■□□□□ 0.55
UPK3BP1-201ENST00000428678 FAM114A1Q8IWE2 563 aa18.46■□□□□ 0.55
UPK3BP1-201ENST00000428678 ZSCAN1Q8NBB4 408 aa18.46■□□□□ 0.55
UPK3BP1-201ENST00000428678 GPR156Q8NFN8 814 aa18.46■□□□□ 0.55
UPK3BP1-201ENST00000428678 JOSD2Q8TAC2 188 aa18.46■□□□□ 0.55
UPK3BP1-201ENST00000428678 EPS8L1Q8TE68 723 aa18.46■□□□□ 0.55
UPK3BP1-201ENST00000428678 HMCESQ96FZ2 354 aa18.46■□□□□ 0.55
UPK3BP1-201ENST00000428678 RBM15Q96T37 977 aaKnown RBP eCLIP18.46■□□□□ 0.55
UPK3BP1-201ENST00000428678 TUBGCP2Q9BSJ2 902 aa18.46■□□□□ 0.55
UPK3BP1-201ENST00000428678 NOL6Q9H6R4 1146 aaKnown RBP18.46■□□□□ 0.55
UPK3BP1-201ENST00000428678 PCDHB11Q9Y5F2 797 aa18.46■□□□□ 0.55
UPK3BP1-201ENST00000428678 ARHGEF17Q96PE2 2063 aaPredicted RBP18.46■□□□□ 0.55
UPK3BP1-201ENST00000428678 SFTPCP11686 197 aa18.45■□□□□ 0.54
UPK3BP1-201ENST00000428678 GLB1P16278 677 aa18.45■□□□□ 0.54
UPK3BP1-201ENST00000428678 ETV5P41161 510 aa18.45■□□□□ 0.54
UPK3BP1-201ENST00000428678 LIG3P49916 1009 aa18.45■□□□□ 0.54
UPK3BP1-201ENST00000428678 INO80DQ53TQ3 878 aaPredicted RBP18.45■□□□□ 0.54
UPK3BP1-201ENST00000428678 HSP90AA4PQ58FG1 418 aa18.45■□□□□ 0.54
UPK3BP1-201ENST00000428678 MIIPQ5JXC2 388 aa18.45■□□□□ 0.54
UPK3BP1-201ENST00000428678 CERCAMQ5T4B2 595 aa18.45■□□□□ 0.54
UPK3BP1-201ENST00000428678 CFAP58Q5T655 872 aa18.45■□□□□ 0.54
UPK3BP1-201ENST00000428678 PHF19Q5T6S3 580 aa18.45■□□□□ 0.54
UPK3BP1-201ENST00000428678 STRADAQ7RTN6 431 aa18.45■□□□□ 0.54
UPK3BP1-201ENST00000428678 TAF8Q7Z7C8 310 aa18.45■□□□□ 0.54
UPK3BP1-201ENST00000428678 RTL3Q8N8U3 475 aaKnown RBP18.45■□□□□ 0.54
UPK3BP1-201ENST00000428678 FAM46DQ8NEK8 389 aa18.45■□□□□ 0.54
UPK3BP1-201ENST00000428678 FAM172AQ8WUF8 416 aa18.45■□□□□ 0.54
UPK3BP1-201ENST00000428678 SLC20A1Q8WUM9 679 aa18.45■□□□□ 0.54
UPK3BP1-201ENST00000428678 TMEM159Q96B96 161 aa18.45■□□□□ 0.54
UPK3BP1-201ENST00000428678 CMKLR1Q99788 373 aa18.45■□□□□ 0.54
UPK3BP1-201ENST00000428678 C11orf70Q9BRQ4 267 aa18.45■□□□□ 0.54
UPK3BP1-201ENST00000428678 FOXJ2Q9P0K8 574 aa18.45■□□□□ 0.54
UPK3BP1-201ENST00000428678 LHX3Q9UBR4 397 aa18.45■□□□□ 0.54
UPK3BP1-201ENST00000428678 APPL1Q9UKG1 709 aa18.45■□□□□ 0.54
UPK3BP1-201ENST00000428678 DAAM1Q9Y4D1 1078 aa18.45■□□□□ 0.54
UPK3BP1-201ENST00000428678 C2CD4BA6NLJ0 364 aa18.44■□□□□ 0.54
UPK3BP1-201ENST00000428678 B4DGG1 531 aa18.44■□□□□ 0.54
UPK3BP1-201ENST00000428678 F8VZ95 297 aa18.44■□□□□ 0.54
UPK3BP1-201ENST00000428678 UCHL3P15374 230 aa18.44■□□□□ 0.54
UPK3BP1-201ENST00000428678 ITGB6P18564 788 aa18.44■□□□□ 0.54
UPK3BP1-201ENST00000428678 MMP8P22894 467 aa18.44■□□□□ 0.54
UPK3BP1-201ENST00000428678 EPHB2P29323 1055 aa18.44■□□□□ 0.54
UPK3BP1-201ENST00000428678 PTPN9P43378 593 aa18.44■□□□□ 0.54
UPK3BP1-201ENST00000428678 HDAC4P56524 1084 aa18.44■□□□□ 0.54
UPK3BP1-201ENST00000428678 ZFP36L1Q07352 338 aaKnown RBP18.44■□□□□ 0.54
UPK3BP1-201ENST00000428678 MTM1Q13496 603 aa18.44■□□□□ 0.54
UPK3BP1-201ENST00000428678 ARHGEF7Q14155 803 aa18.44■□□□□ 0.54
UPK3BP1-201ENST00000428678 TBR1Q16650 682 aa18.44■□□□□ 0.54
UPK3BP1-201ENST00000428678 UGP2Q16851 508 aa18.44■□□□□ 0.54
UPK3BP1-201ENST00000428678 SPRED1Q7Z699 444 aa18.44■□□□□ 0.54
UPK3BP1-201ENST00000428678 PYROXD2Q8N2H3 581 aa18.44■□□□□ 0.54
UPK3BP1-201ENST00000428678 SLC30A5Q8TAD4 765 aa18.44■□□□□ 0.54
UPK3BP1-201ENST00000428678 OR1E3Q8WZA6 343 aa18.44■□□□□ 0.54
UPK3BP1-201ENST00000428678 USP7Q93009 1102 aa18.44■□□□□ 0.54
UPK3BP1-201ENST00000428678 NAA15Q9BXJ9 866 aaKnown RBP18.44■□□□□ 0.54
UPK3BP1-201ENST00000428678 SUV39H2Q9H5I1 410 aa18.44■□□□□ 0.54
UPK3BP1-201ENST00000428678 DGKBQ9Y6T7 804 aa18.44■□□□□ 0.54
UPK3BP1-201ENST00000428678 RNF215Q9Y6U7 377 aa18.44■□□□□ 0.54
UPK3BP1-201ENST00000428678 RASA4BC9J798 803 aa18.43■□□□□ 0.54
UPK3BP1-201ENST00000428678 RASA4O43374 803 aa18.43■□□□□ 0.54
UPK3BP1-201ENST00000428678 SUV39H1O43463 412 aa18.43■□□□□ 0.54
UPK3BP1-201ENST00000428678 PRKCGP05129 697 aa18.43■□□□□ 0.54
UPK3BP1-201ENST00000428678 MMP12P39900 470 aa18.43■□□□□ 0.54
UPK3BP1-201ENST00000428678 CYP4F2P78329 520 aa18.43■□□□□ 0.54
UPK3BP1-201ENST00000428678 BECN1Q14457 450 aa18.43■□□□□ 0.54
UPK3BP1-201ENST00000428678 MAP9Q49MG5 647 aa18.43■□□□□ 0.54
UPK3BP1-201ENST00000428678 C14orf28Q4W4Y0 310 aa18.43■□□□□ 0.54
UPK3BP1-201ENST00000428678 DNAAF5Q86Y56 855 aa18.43■□□□□ 0.54
UPK3BP1-201ENST00000428678 SFTPA2Q8IWL1 248 aa18.43■□□□□ 0.54
UPK3BP1-201ENST00000428678 MLKLQ8NB16 471 aa18.43■□□□□ 0.54
UPK3BP1-201ENST00000428678 PLA2G15Q8NCC3 412 aa18.43■□□□□ 0.54
UPK3BP1-201ENST00000428678 OR56A4Q8NGH8 313 aa18.43■□□□□ 0.54
UPK3BP1-201ENST00000428678 CENPIQ92674 756 aaPredicted RBP18.43■□□□□ 0.54
UPK3BP1-201ENST00000428678 NTAN1Q96AB6 310 aa18.43■□□□□ 0.54
UPK3BP1-201ENST00000428678 STK33Q9BYT3 514 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms