RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 ADAM21Q9UKJ8 722 aa9.13□□□□□ -0.95
NR1I3-209ENST00000428574 CLEC4EQ9ULY5 219 aa9.13□□□□□ -0.95
NR1I3-209ENST00000428574 VPS9D1Q9Y2B5 631 aa9.13□□□□□ -0.95
NR1I3-209ENST00000428574 FCF1Q9Y324 198 aaKnown RBP9.13□□□□□ -0.95
NR1I3-209ENST00000428574 CAPN8A6NHC0 703 aa9.12□□□□□ -0.95
NR1I3-209ENST00000428574 ARNTLO00327 626 aa9.12□□□□□ -0.95
NR1I3-209ENST00000428574 PFDN6O15212 129 aa9.12□□□□□ -0.95
NR1I3-209ENST00000428574 SMAD6O43541 496 aaKnown RBP9.12□□□□□ -0.95
NR1I3-209ENST00000428574 LDB2O43679 373 aa9.12□□□□□ -0.95
NR1I3-209ENST00000428574 SHOX2O60902 331 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-209ENST00000428574 RPP40O75818 363 aaKnown RBP9.12□□□□□ -0.95
NR1I3-209ENST00000428574 MT-CO1P00395 513 aa9.12□□□□□ -0.95
NR1I3-209ENST00000428574 GLULP15104 373 aa9.12□□□□□ -0.95
NR1I3-209ENST00000428574 OGNP20774 298 aaKnown RBP9.12□□□□□ -0.95
NR1I3-209ENST00000428574 CCNFP41002 786 aa9.12□□□□□ -0.95
NR1I3-209ENST00000428574 CHRNA4P43681 627 aa9.12□□□□□ -0.95
NR1I3-209ENST00000428574 SLCO1A2P46721 670 aa9.12□□□□□ -0.95
NR1I3-209ENST00000428574 ZNF140P52738 457 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-209ENST00000428574 MLLT1Q03111 559 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-209ENST00000428574 TRAF2Q12933 501 aa9.12□□□□□ -0.95
NR1I3-209ENST00000428574 SMAD4Q13485 552 aaKnown RBP9.12□□□□□ -0.95
NR1I3-209ENST00000428574 HTR4Q13639 388 aa9.12□□□□□ -0.95
NR1I3-209ENST00000428574 THOC5Q13769 683 aaKnown RBP9.12□□□□□ -0.95
NR1I3-209ENST00000428574 GRIN2CQ14957 1233 aa9.12□□□□□ -0.95
NR1I3-209ENST00000428574 DLG2Q15700 870 aa9.12□□□□□ -0.95
NR1I3-209ENST00000428574 DBN1Q16643 649 aa9.12□□□□□ -0.95
NR1I3-209ENST00000428574 AARS2Q5JTZ9 985 aaKnown RBP9.12□□□□□ -0.95
NR1I3-209ENST00000428574 DGKKQ5KSL6 1271 aa9.12□□□□□ -0.95
NR1I3-209ENST00000428574 TEDDM1Q5T9Z0 273 aa9.12□□□□□ -0.95
NR1I3-209ENST00000428574 KCTD16Q68DU8 428 aa9.12□□□□□ -0.95
NR1I3-209ENST00000428574 TRMT10BQ6PF06 316 aaKnown RBP9.12□□□□□ -0.95
NR1I3-209ENST00000428574 PACS1Q6VY07 963 aa9.12□□□□□ -0.95
NR1I3-209ENST00000428574 LEKR1Q6ZMV7 388 aa9.12□□□□□ -0.95
NR1I3-209ENST00000428574 CAPN12Q6ZSI9 719 aa9.12□□□□□ -0.95
NR1I3-209ENST00000428574 USP45Q70EL2 814 aa9.12□□□□□ -0.95
NR1I3-209ENST00000428574 RASSF3Q86WH2 238 aa9.12□□□□□ -0.95
NR1I3-209ENST00000428574 CTAGE3PQ8IX95 158 aa9.12□□□□□ -0.95
NR1I3-209ENST00000428574 PHTF2Q8N3S3 785 aa9.12□□□□□ -0.95
NR1I3-209ENST00000428574 PPM1NQ8N819 430 aa9.12□□□□□ -0.95
NR1I3-209ENST00000428574 DTX3LQ8TDB6 740 aa9.12□□□□□ -0.95
NR1I3-209ENST00000428574 DNASE1L2Q92874 299 aa9.12□□□□□ -0.95
NR1I3-209ENST00000428574 RMDN1Q96DB5 314 aa9.12□□□□□ -0.95
NR1I3-209ENST00000428574 MFSD3Q96ES6 412 aa9.12□□□□□ -0.95
NR1I3-209ENST00000428574 CABS1Q96KC9 395 aa9.12□□□□□ -0.95
NR1I3-209ENST00000428574 FCRL3Q96P31 734 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-209ENST00000428574 RBBP8Q99708 897 aa9.12□□□□□ -0.95
NR1I3-209ENST00000428574 CDH19Q9H159 772 aa9.12□□□□□ -0.95
NR1I3-209ENST00000428574 RHOJQ9H4E5 214 aa9.12□□□□□ -0.95
NR1I3-209ENST00000428574 CCDC134Q9H6E4 229 aa9.12□□□□□ -0.95
NR1I3-209ENST00000428574 FBRSQ9HAH7 460 aa9.12□□□□□ -0.95
NR1I3-209ENST00000428574 C20orf96Q9NUD7 363 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-209ENST00000428574 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-209ENST00000428574 BCCIPQ9P287 314 aaKnown RBP eCLIP9.12□□□□□ -0.95
NR1I3-209ENST00000428574 PHTF1Q9UMS5 762 aa9.12□□□□□ -0.95
NR1I3-209ENST00000428574 PLA2G4CQ9UP65 541 aa9.12□□□□□ -0.95
NR1I3-209ENST00000428574 STARD13Q9Y3M8 1113 aa9.12□□□□□ -0.95
NR1I3-209ENST00000428574 USP15Q9Y4E8 981 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-209ENST00000428574 COL4A3Q01955 1670 aa9.11□□□□□ -0.95
NR1I3-209ENST00000428574 KIAA1549LQ6ZVL6 1849 aa9.11□□□□□ -0.95
NR1I3-209ENST00000428574 A0A0J9YYE9 177 aa9.11□□□□□ -0.95
NR1I3-209ENST00000428574 EDDM13A0A1B0GTR0 161 aa9.11□□□□□ -0.95
NR1I3-209ENST00000428574 FAM47DPA6NHR8 397 aa9.11□□□□□ -0.95
NR1I3-209ENST00000428574 SMIM23A6NLE4 172 aa9.11□□□□□ -0.95
NR1I3-209ENST00000428574 K7ERQ8 282 aa9.11□□□□□ -0.95
NR1I3-209ENST00000428574 ZWINTO95229 277 aa9.11□□□□□ -0.95
NR1I3-209ENST00000428574 TRBC1P01850 177 aa9.11□□□□□ -0.95
NR1I3-209ENST00000428574 MT-ND3P03897 115 aa9.11□□□□□ -0.95
NR1I3-209ENST00000428574 PRNPP04156 253 aa9.11□□□□□ -0.95
NR1I3-209ENST00000428574 CHRM1P11229 460 aaPredicted RBP9.11□□□□□ -0.95
NR1I3-209ENST00000428574 HNRNPLP14866 589 aaKnown RBP eCLIP9.11□□□□□ -0.95
NR1I3-209ENST00000428574 BRAFP15056 766 aa9.11□□□□□ -0.95
NR1I3-209ENST00000428574 ARSAP15289 507 aa9.11□□□□□ -0.95
NR1I3-209ENST00000428574 ZNF30P17039 623 aa9.11□□□□□ -0.95
NR1I3-209ENST00000428574 TPH1P17752 444 aa9.11□□□□□ -0.95
NR1I3-209ENST00000428574 LPOP22079 712 aaPredicted RBP9.11□□□□□ -0.95
NR1I3-209ENST00000428574 ARNTP27540 789 aa9.11□□□□□ -0.95
NR1I3-209ENST00000428574 NMBRP28336 390 aa9.11□□□□□ -0.95
NR1I3-209ENST00000428574 HMGCLP35914 325 aa9.11□□□□□ -0.95
NR1I3-209ENST00000428574 GRIA2P42262 883 aa9.11□□□□□ -0.95
NR1I3-209ENST00000428574 MAGEA12P43365 314 aa9.11□□□□□ -0.95
NR1I3-209ENST00000428574 TNFRSF4P43489 277 aa9.11□□□□□ -0.95
NR1I3-209ENST00000428574 SERPINB8P50452 374 aa9.11□□□□□ -0.95
NR1I3-209ENST00000428574 CCNHP51946 323 aaPredicted RBP9.11□□□□□ -0.95
NR1I3-209ENST00000428574 EPHB1P54762 984 aa9.11□□□□□ -0.95
NR1I3-209ENST00000428574 PRAMEP78395 509 aa9.11□□□□□ -0.95
NR1I3-209ENST00000428574 SLC18A2Q05940 514 aa9.11□□□□□ -0.95
NR1I3-209ENST00000428574 MTM1Q13496 603 aa9.11□□□□□ -0.95
NR1I3-209ENST00000428574 OLIG2Q13516 323 aa9.11□□□□□ -0.95
NR1I3-209ENST00000428574 ENPP2Q13822 863 aa9.11□□□□□ -0.95
NR1I3-209ENST00000428574 SEPT6Q14141 434 aa9.11□□□□□ -0.95
NR1I3-209ENST00000428574 ADGRE1Q14246 886 aa9.11□□□□□ -0.95
NR1I3-209ENST00000428574 ELAVL3Q14576 367 aaKnown RBP9.11□□□□□ -0.95
NR1I3-209ENST00000428574 CNGA3Q16281 694 aa9.11□□□□□ -0.95
NR1I3-209ENST00000428574 QPCTQ16769 361 aa9.11□□□□□ -0.95
NR1I3-209ENST00000428574 GEN1Q17RS7 908 aa9.11□□□□□ -0.95
NR1I3-209ENST00000428574 INSCQ1MX18 579 aa9.11□□□□□ -0.95
NR1I3-209ENST00000428574 RNF187Q5TA31 235 aaPredicted RBP9.11□□□□□ -0.95
NR1I3-209ENST00000428574 TMEM215Q68D42 235 aa9.11□□□□□ -0.95
NR1I3-209ENST00000428574 MRNIPQ6NTE8 343 aa9.11□□□□□ -0.95
NR1I3-209ENST00000428574 ESRP1Q6NXG1 681 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms