RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 IFI16Q16666 785 aaKnown RBP20.8■□□□□ 0.92
HSPG2-205ENST00000427897 FAXCQ5TGI0 409 aa20.8■□□□□ 0.92
HSPG2-205ENST00000427897 CPNE8Q86YQ8 564 aa20.8■□□□□ 0.92
HSPG2-205ENST00000427897 SLC25A45Q8N413 288 aa20.8■□□□□ 0.92
HSPG2-205ENST00000427897 CCNYQ8ND76 341 aa20.8■□□□□ 0.92
HSPG2-205ENST00000427897 LUC7LQ9NQ29 371 aaKnown RBP20.8■□□□□ 0.92
HSPG2-205ENST00000427897 MBNL1Q9NR56 388 aaKnown RBP20.8■□□□□ 0.92
HSPG2-205ENST00000427897 UCKL1Q9NWZ5 548 aa20.8■□□□□ 0.92
HSPG2-205ENST00000427897 TTLL3Q9Y4R7 772 aa20.8■□□□□ 0.92
HSPG2-205ENST00000427897 ANKRD36A6QL64 1941 aa20.8■□□□□ 0.92
HSPG2-205ENST00000427897 LRRD1A4D1F6 860 aa20.79■□□□□ 0.92
HSPG2-205ENST00000427897 FAM221BA6H8Z2 402 aa20.79■□□□□ 0.92
HSPG2-205ENST00000427897 MUSKO15146 869 aa20.79■□□□□ 0.92
HSPG2-205ENST00000427897 SIGLEC6O43699 453 aa20.79■□□□□ 0.92
HSPG2-205ENST00000427897 MFSD11O43934 449 aa20.79■□□□□ 0.92
HSPG2-205ENST00000427897 CPP00450 1065 aa20.79■□□□□ 0.92
HSPG2-205ENST00000427897 CSF2P04141 144 aa20.79■□□□□ 0.92
HSPG2-205ENST00000427897 KRT10P13645 584 aa20.79■□□□□ 0.92
HSPG2-205ENST00000427897 MX2P20592 715 aa20.79■□□□□ 0.92
HSPG2-205ENST00000427897 KDELR1P24390 212 aa20.79■□□□□ 0.92
HSPG2-205ENST00000427897 HTR1BP28222 390 aa20.79■□□□□ 0.92
HSPG2-205ENST00000427897 MAGEA1P43355 309 aa20.79■□□□□ 0.92
HSPG2-205ENST00000427897 ARSEP51690 589 aa20.79■□□□□ 0.92
HSPG2-205ENST00000427897 TBX2Q13207 712 aaPredicted RBP20.79■□□□□ 0.92
HSPG2-205ENST00000427897 SPA17Q15506 151 aa20.79■□□□□ 0.92
HSPG2-205ENST00000427897 NCBP2-AS2Q69YL0 99 aa20.79■□□□□ 0.92
HSPG2-205ENST00000427897 TMPRSS7Q7RTY8 843 aa20.79■□□□□ 0.92
HSPG2-205ENST00000427897 KANSL1Q7Z3B3 1105 aa20.79■□□□□ 0.92
HSPG2-205ENST00000427897 ZSWIM9Q86XI8 627 aa20.79■□□□□ 0.92
HSPG2-205ENST00000427897 NDUFAF2Q8N183 169 aa20.79■□□□□ 0.92
HSPG2-205ENST00000427897 TP53I13Q8NBR0 393 aaPredicted RBP20.79■□□□□ 0.92
HSPG2-205ENST00000427897 OR4C6Q8NH72 309 aa20.79■□□□□ 0.92
HSPG2-205ENST00000427897 PCDH19Q8TAB3 1148 aa20.79■□□□□ 0.92
HSPG2-205ENST00000427897 FAM71BQ8TC56 605 aa20.79■□□□□ 0.92
HSPG2-205ENST00000427897 LMX1AQ8TE12 382 aa20.79■□□□□ 0.92
HSPG2-205ENST00000427897 RFFLQ8WZ73 363 aa20.79■□□□□ 0.92
HSPG2-205ENST00000427897 DUSP23Q9BVJ7 150 aa20.79■□□□□ 0.92
HSPG2-205ENST00000427897 SLC13A1Q9BZW2 595 aa20.79■□□□□ 0.92
HSPG2-205ENST00000427897 INTUQ9ULD6 942 aa20.79■□□□□ 0.92
HSPG2-205ENST00000427897 SHROOM3Q8TF72 1996 aa20.79■□□□□ 0.92
HSPG2-205ENST00000427897 TDRD6O60522 2096 aaKnown RBP20.79■□□□□ 0.92
HSPG2-205ENST00000427897 SOCS5O75159 536 aa20.78■□□□□ 0.92
HSPG2-205ENST00000427897 MAP3K6O95382 1288 aa20.78■□□□□ 0.92
HSPG2-205ENST00000427897 PCCBP05166 539 aa20.78■□□□□ 0.92
HSPG2-205ENST00000427897 JUPP14923 745 aa20.78■□□□□ 0.92
HSPG2-205ENST00000427897 HNF1BP35680 557 aa20.78■□□□□ 0.92
HSPG2-205ENST00000427897 MMP12P39900 470 aa20.78■□□□□ 0.92
HSPG2-205ENST00000427897 GARSP41250 739 aaKnown RBP20.78■□□□□ 0.92
HSPG2-205ENST00000427897 ACOX1Q15067 660 aa20.78■□□□□ 0.92
HSPG2-205ENST00000427897 IRF4Q15306 451 aa20.78■□□□□ 0.92
HSPG2-205ENST00000427897 RALGPS1Q5JS13 557 aa20.78■□□□□ 0.92
HSPG2-205ENST00000427897 CCNI2Q6ZMN8 369 aaPredicted RBP20.78■□□□□ 0.92
HSPG2-205ENST00000427897 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.78■□□□□ 0.92
HSPG2-205ENST00000427897 ATL2Q8NHH9 583 aa20.78■□□□□ 0.92
HSPG2-205ENST00000427897 GATA6Q92908 595 aa20.78■□□□□ 0.92
HSPG2-205ENST00000427897 ECHDC3Q96DC8 303 aa20.78■□□□□ 0.92
HSPG2-205ENST00000427897 NOD2Q9HC29 1040 aa20.78■□□□□ 0.92
HSPG2-205ENST00000427897 SPASTQ9UBP0 616 aa20.78■□□□□ 0.92
HSPG2-205ENST00000427897 DOLKQ9UPQ8 538 aa20.78■□□□□ 0.92
HSPG2-205ENST00000427897 KNL1Q8NG31 2342 aa20.78■□□□□ 0.92
HSPG2-205ENST00000427897 CFAP69A5D8W1 941 aa20.77■□□□□ 0.92
HSPG2-205ENST00000427897 TRIM38O00635 465 aa20.77■□□□□ 0.92
HSPG2-205ENST00000427897 SCAMP1O15126 338 aa20.77■□□□□ 0.92
HSPG2-205ENST00000427897 MATN3O15232 486 aa20.77■□□□□ 0.92
HSPG2-205ENST00000427897 AQP9O43315 295 aa20.77■□□□□ 0.92
HSPG2-205ENST00000427897 SPOPO43791 374 aa20.77■□□□□ 0.92
HSPG2-205ENST00000427897 CYP2A6P11509 494 aaPredicted RBP20.77■□□□□ 0.92
HSPG2-205ENST00000427897 CTSEP14091 401 aa20.77■□□□□ 0.92
HSPG2-205ENST00000427897 NME1P15531 152 aaKnown RBP20.77■□□□□ 0.92
HSPG2-205ENST00000427897 CCNCP24863 283 aa20.77■□□□□ 0.92
HSPG2-205ENST00000427897 CYLC1P35663 651 aaPredicted RBP20.77■□□□□ 0.92
HSPG2-205ENST00000427897 SLC1A1P43005 524 aa20.77■□□□□ 0.92
HSPG2-205ENST00000427897 BLKP51451 505 aa20.77■□□□□ 0.92
HSPG2-205ENST00000427897 DUSP3P51452 185 aaPredicted RBP20.77■□□□□ 0.92
HSPG2-205ENST00000427897 PPARDQ03181 441 aa20.77■□□□□ 0.92
HSPG2-205ENST00000427897 GALNT2Q10471 571 aa20.77■□□□□ 0.92
HSPG2-205ENST00000427897 ILKQ13418 452 aa20.77■□□□□ 0.92
HSPG2-205ENST00000427897 INPP5AQ14642 412 aa20.77■□□□□ 0.92
HSPG2-205ENST00000427897 WSCD2Q2TBF2 565 aa20.77■□□□□ 0.92
HSPG2-205ENST00000427897 DENND2CQ68D51 928 aa20.77■□□□□ 0.92
HSPG2-205ENST00000427897 KDM7AQ6ZMT4 941 aa20.77■□□□□ 0.92
HSPG2-205ENST00000427897 PGBD5Q8N414 524 aa20.77■□□□□ 0.92
HSPG2-205ENST00000427897 ZCCHC14Q8WYQ9 949 aaKnown RBP20.77■□□□□ 0.92
HSPG2-205ENST00000427897 IL12RB2Q99665 862 aa20.77■□□□□ 0.92
HSPG2-205ENST00000427897 MGME1Q9BQP7 344 aa20.77■□□□□ 0.92
HSPG2-205ENST00000427897 POLR1EQ9GZS1 481 aaKnown RBP20.77■□□□□ 0.92
HSPG2-205ENST00000427897 NLGN3Q9NZ94 848 aa20.77■□□□□ 0.92
HSPG2-205ENST00000427897 APOBEC3BQ9UH17 382 aaKnown RBP20.77■□□□□ 0.92
HSPG2-205ENST00000427897 PHTF1Q9UMS5 762 aa20.77■□□□□ 0.92
HSPG2-205ENST00000427897 CABIN1Q9Y6J0 2220 aa20.77■□□□□ 0.91
HSPG2-205ENST00000427897 TRAFD1O14545 582 aaPredicted RBP20.76■□□□□ 0.91
HSPG2-205ENST00000427897 IPO7O95373 1038 aaKnown RBP20.76■□□□□ 0.91
HSPG2-205ENST00000427897 PEX11BO96011 259 aa20.76■□□□□ 0.91
HSPG2-205ENST00000427897 KRT1P04264 644 aa20.76■□□□□ 0.91
HSPG2-205ENST00000427897 ACADVLP49748 655 aa20.76■□□□□ 0.91
HSPG2-205ENST00000427897 PEX5P50542 639 aa20.76■□□□□ 0.91
HSPG2-205ENST00000427897 EPHB1P54762 984 aa20.76■□□□□ 0.91
HSPG2-205ENST00000427897 ARHGEF7Q14155 803 aa20.76■□□□□ 0.91
HSPG2-205ENST00000427897 ARMC12Q5T9G4 340 aa20.76■□□□□ 0.91
HSPG2-205ENST00000427897 ENPP7Q6UWV6 458 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms