RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 ZC3H7BQ9UGR2 993 aaKnown RBP5.65□□□□□ -1.5
VTI1BP4-201ENST00000427516 CHORDC1Q9UHD1 332 aaPredicted RBP5.65□□□□□ -1.5
VTI1BP4-201ENST00000427516 PGAP2Q9UHJ9 254 aa5.65□□□□□ -1.5
VTI1BP4-201ENST00000427516 TLK1Q9UKI8 766 aa5.65□□□□□ -1.5
VTI1BP4-201ENST00000427516 SARDHQ9UL12 918 aa5.65□□□□□ -1.5
VTI1BP4-201ENST00000427516 CNOT6Q9ULM6 557 aaKnown RBP5.65□□□□□ -1.5
VTI1BP4-201ENST00000427516 MAPRE3Q9UPY8 281 aa5.65□□□□□ -1.5
VTI1BP4-201ENST00000427516 AP3M1Q9Y2T2 418 aa5.65□□□□□ -1.5
VTI1BP4-201ENST00000427516 TPRKBQ9Y3C4 175 aa5.65□□□□□ -1.5
VTI1BP4-201ENST00000427516 CORINQ9Y5Q5 1042 aa5.65□□□□□ -1.5
VTI1BP4-201ENST00000427516 HSPE1-MOB4S4R3N1 261 aa5.65□□□□□ -1.5
VTI1BP4-201ENST00000427516 SCN7AQ01118 1682 aa5.65□□□□□ -1.51
VTI1BP4-201ENST00000427516 TMEM2Q9UHN6 1383 aa5.65□□□□□ -1.51
VTI1BP4-201ENST00000427516 SLIT2O94813 1529 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 LOXHD1Q8IVV2 1947 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 LOC100653049A0A140TA62 436 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 C7orf72A4D263 438 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 C2orf71A6NGG8 1288 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 CLDN24A6NM45 220 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 FAM170BA6NMN3 283 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 ZNF99A8MXY4 864 aaPredicted RBP5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 ZNF487B1APH4 448 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 CFLARO15519 480 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 NMT2O60551 498 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 PLIN3O60664 434 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 KPNA6O60684 536 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 BCAS1O75363 584 aaPredicted RBP5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 MED24O75448 989 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 UGT2B17O75795 530 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 KRT34O76011 436 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 SLITRK5O94991 958 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 FOSP01100 380 aaPredicted RBP5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 LDLRP01130 860 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 IFNA14P01570 189 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 CHRNA1P02708 482 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 PDGFAP04085 211 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 NPR3P17342 541 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 NR4A1P22736 598 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 PTX3P26022 381 aaPredicted RBP5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 HNF4AP41235 474 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 HTR2BP41595 481 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 NR4A2P43354 598 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 PTPN9P43378 593 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 ERFP50548 548 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 RPL14P50914 215 aaKnown RBP5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 MAPK12P53778 367 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 UGT2B15P54855 530 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 SLC12A2P55011 1212 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 CDH15P55291 814 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 FMO1Q01740 532 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 ROR1Q01973 937 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 PRKCEQ02156 737 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 ZNF33BQ06732 778 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 PPP3CAQ08209 521 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 KCNA1Q09470 495 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 FADDQ13158 208 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 IKZF1Q13422 519 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 CEACAM7Q14002 265 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 NR6A1Q15406 480 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 PSMD5Q16401 504 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 GEN1Q17RS7 908 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 ZNF404Q494X3 552 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 ERFEQ4G0M1 354 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 EPC2Q52LR7 807 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 COQ5Q5HYK3 327 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 PAGE2BQ5JRK9 111 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 KCNT1Q5JUK3 1230 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 SULT1C3Q6IMI6 304 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 DENND5AQ6IQ26 1287 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 CORO6Q6QEF8 472 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 BBS12Q6ZW61 710 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 USP51Q70EK9 711 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 CHSY3Q70JA7 882 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 LIMS2Q7Z4I7 341 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 C14orf80Q86SX3 495 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 KRT73Q86Y46 540 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 NPAS3Q8IXF0 933 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 FAM178BQ8IXR5 827 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 MICU2Q8IYU8 434 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 TCTE3Q8IZS6 198 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 CLIP4Q8N3C7 705 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 SVOPLQ8N434 492 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 CBR4Q8N4T8 237 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 TMEM199Q8N511 208 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 FBXL6Q8N531 539 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 KIAA1958Q8N8K9 716 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 NIPA2Q8N8Q9 360 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 ANKRD52Q8NB46 1076 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 TXNDC5Q8NBS9 432 aaKnown RBP5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 CMASQ8NFW8 434 aaPredicted RBP5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 SLC35B2Q8TB61 432 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 URGCPQ8TCY9 931 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 SYTL5Q8TDW5 730 aaPredicted RBP5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 LRRC15Q8TF66 581 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 SLC20A1Q8WUM9 679 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 SLC7A3Q8WY07 619 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 CPT1BQ92523 772 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 GJA10Q969M2 543 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 DACT3Q96B18 629 aaPredicted RBP5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 NXNL1Q96CM4 212 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms