RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 PDCD6IPQ8WUM4 868 aaKnown RBP18.56■□□□□ 0.56
GPC1-205ENST00000427506 CCDC42Q96M95 316 aa18.56■□□□□ 0.56
GPC1-205ENST00000427506 DUSP23Q9BVJ7 150 aa18.56■□□□□ 0.56
GPC1-205ENST00000427506 SCUBE2Q9NQ36 999 aa18.56■□□□□ 0.56
GPC1-205ENST00000427506 LCMT1Q9UIC8 334 aa18.56■□□□□ 0.56
GPC1-205ENST00000427506 SRRM3A6NNA2 597 aaPredicted RBP18.55■□□□□ 0.56
GPC1-205ENST00000427506 AQP9O43315 295 aa18.55■□□□□ 0.56
GPC1-205ENST00000427506 MFAP3LO75121 409 aa18.55■□□□□ 0.56
GPC1-205ENST00000427506 EIF2B5Q13144 721 aaKnown RBP18.55■□□□□ 0.56
GPC1-205ENST00000427506 DPYSL3Q14195 570 aa18.55■□□□□ 0.56
GPC1-205ENST00000427506 ASTE1Q2TB18 679 aaPredicted RBP18.55■□□□□ 0.56
GPC1-205ENST00000427506 FAXCQ5TGI0 409 aa18.55■□□□□ 0.56
GPC1-205ENST00000427506 MARC1Q5VT66 337 aa18.55■□□□□ 0.56
GPC1-205ENST00000427506 CPNE8Q86YQ8 564 aa18.55■□□□□ 0.56
GPC1-205ENST00000427506 MAP7D3Q8IWC1 876 aa18.55■□□□□ 0.56
GPC1-205ENST00000427506 MDM1Q8TC05 714 aa18.55■□□□□ 0.56
GPC1-205ENST00000427506 ECHDC3Q96DC8 303 aa18.55■□□□□ 0.56
GPC1-205ENST00000427506 CHP1Q99653 195 aa18.55■□□□□ 0.56
GPC1-205ENST00000427506 EVA1BQ9NVM1 165 aa18.55■□□□□ 0.56
GPC1-205ENST00000427506 SPASTQ9UBP0 616 aa18.55■□□□□ 0.56
GPC1-205ENST00000427506 APOBEC3BQ9UH17 382 aaKnown RBP18.55■□□□□ 0.56
GPC1-205ENST00000427506 KLF15Q9UIH9 416 aa18.55■□□□□ 0.56
GPC1-205ENST00000427506 PTPRBP23467 1997 aa18.54■□□□□ 0.56
GPC1-205ENST00000427506 AKAP13Q12802 2813 aa18.54■□□□□ 0.56
GPC1-205ENST00000427506 TRABD2BA6NFA1 517 aa18.54■□□□□ 0.56
GPC1-205ENST00000427506 A8MX80 341 aa18.54■□□□□ 0.56
GPC1-205ENST00000427506 K7ESM1 405 aa18.54■□□□□ 0.56
GPC1-205ENST00000427506 PEX11BO96011 259 aa18.54■□□□□ 0.56
GPC1-205ENST00000427506 PCCBP05166 539 aa18.54■□□□□ 0.56
GPC1-205ENST00000427506 KRT7P08729 469 aa18.54■□□□□ 0.56
GPC1-205ENST00000427506 TMEM253P0C7T8 217 aa18.54■□□□□ 0.56
GPC1-205ENST00000427506 ELFN1P0C7U0 828 aa18.54■□□□□ 0.56
GPC1-205ENST00000427506 GIMD1P0DJR0 217 aa18.54■□□□□ 0.56
GPC1-205ENST00000427506 IL4RP24394 825 aa18.54■□□□□ 0.56
GPC1-205ENST00000427506 MMP13P45452 471 aa18.54■□□□□ 0.56
GPC1-205ENST00000427506 MESDQ14696 234 aa18.54■□□□□ 0.56
GPC1-205ENST00000427506 PDK2Q15119 407 aa18.54■□□□□ 0.56
GPC1-205ENST00000427506 WSCD2Q2TBF2 565 aa18.54■□□□□ 0.56
GPC1-205ENST00000427506 HES3Q5TGS1 186 aa18.54■□□□□ 0.56
GPC1-205ENST00000427506 MACC1Q6ZN28 852 aa18.54■□□□□ 0.56
GPC1-205ENST00000427506 PHACTR4Q8IZ21 702 aa18.54■□□□□ 0.56
GPC1-205ENST00000427506 PDCD7Q8N8D1 485 aaKnown RBP18.54■□□□□ 0.56
GPC1-205ENST00000427506 FAM71BQ8TC56 605 aa18.54■□□□□ 0.56
GPC1-205ENST00000427506 APOLD1Q96LR9 279 aa18.54■□□□□ 0.56
GPC1-205ENST00000427506 NUDCD1Q96RS6 583 aa18.54■□□□□ 0.56
GPC1-205ENST00000427506 SLC13A1Q9BZW2 595 aa18.54■□□□□ 0.56
GPC1-205ENST00000427506 NHEJ1Q9H9Q4 299 aaPredicted RBP18.54■□□□□ 0.56
GPC1-205ENST00000427506 SPTLC3Q9NUV7 552 aa18.54■□□□□ 0.56
GPC1-205ENST00000427506 PCDHGC4Q9Y5F7 938 aa18.54■□□□□ 0.56
GPC1-205ENST00000427506 CSNK1G3Q9Y6M4 447 aa18.54■□□□□ 0.56
GPC1-205ENST00000427506 FRYQ5TBA9 3013 aa18.53■□□□□ 0.56
GPC1-205ENST00000427506 A0A1W2PQ67 120 aa18.53■□□□□ 0.56
GPC1-205ENST00000427506 TRAFD1O14545 582 aaPredicted RBP18.53■□□□□ 0.56
GPC1-205ENST00000427506 CKMT1AP12532 417 aa18.53■□□□□ 0.56
GPC1-205ENST00000427506 MYF5P13349 255 aa18.53■□□□□ 0.56
GPC1-205ENST00000427506 HTR1BP28222 390 aa18.53■□□□□ 0.56
GPC1-205ENST00000427506 DUSP3P51452 185 aaPredicted RBP18.53■□□□□ 0.56
GPC1-205ENST00000427506 ARSEP51690 589 aa18.53■□□□□ 0.56
GPC1-205ENST00000427506 TAS2R40P59535 323 aa18.53■□□□□ 0.56
GPC1-205ENST00000427506 MAXP61244 160 aa18.53■□□□□ 0.56
GPC1-205ENST00000427506 E2F1Q01094 437 aa18.53■□□□□ 0.56
GPC1-205ENST00000427506 PPARDQ03181 441 aa18.53■□□□□ 0.56
GPC1-205ENST00000427506 ITKQ08881 620 aa18.53■□□□□ 0.56
GPC1-205ENST00000427506 INPP5AQ14642 412 aa18.53■□□□□ 0.56
GPC1-205ENST00000427506 ANKRD20A8PQ5CZ79 823 aa18.53■□□□□ 0.56
GPC1-205ENST00000427506 PRRT3Q5FWE3 981 aa18.53■□□□□ 0.56
GPC1-205ENST00000427506 PROSER1Q86XN7 944 aa18.53■□□□□ 0.56
GPC1-205ENST00000427506 LRRC49Q8IUZ0 686 aa18.53■□□□□ 0.56
GPC1-205ENST00000427506 CNGA4Q8IV77 575 aa18.53■□□□□ 0.56
GPC1-205ENST00000427506 RBFAQ8N0V3 343 aa18.53■□□□□ 0.56
GPC1-205ENST00000427506 PGBD5Q8N414 524 aa18.53■□□□□ 0.56
GPC1-205ENST00000427506 NSMCE3Q96MG7 304 aa18.53■□□□□ 0.56
GPC1-205ENST00000427506 IL12RB2Q99665 862 aa18.53■□□□□ 0.56
GPC1-205ENST00000427506 MGME1Q9BQP7 344 aa18.53■□□□□ 0.56
GPC1-205ENST00000427506 ZNF670Q9BS34 389 aa18.53■□□□□ 0.56
GPC1-205ENST00000427506 NT5MQ9NPB1 228 aa18.53■□□□□ 0.56
GPC1-205ENST00000427506 KMT2BQ9UMN6 2715 aaPredicted RBP18.53■□□□□ 0.56
GPC1-205ENST00000427506 PLXNB3Q9ULL4 1909 aa18.53■□□□□ 0.56
GPC1-205ENST00000427506 USP24Q9UPU5 2620 aa18.52■□□□□ 0.56
GPC1-205ENST00000427506 CFAP69A5D8W1 941 aa18.52■□□□□ 0.56
GPC1-205ENST00000427506 AKR1B15C9JRZ8 316 aaPredicted RBP18.52■□□□□ 0.56
GPC1-205ENST00000427506 MFSD11O43934 449 aa18.52■□□□□ 0.56
GPC1-205ENST00000427506 SOCS5O75159 536 aa18.52■□□□□ 0.56
GPC1-205ENST00000427506 RECQL5O94762 991 aaPredicted RBP18.52■□□□□ 0.56
GPC1-205ENST00000427506 CPP00450 1065 aa18.52■□□□□ 0.56
GPC1-205ENST00000427506 NFKBIAP25963 317 aa18.52■□□□□ 0.56
GPC1-205ENST00000427506 PEX5P50542 639 aa18.52■□□□□ 0.56
GPC1-205ENST00000427506 RALGDSQ12967 914 aa18.52■□□□□ 0.56
GPC1-205ENST00000427506 TARDBPQ13148 414 aaKnown RBP eCLIP18.52■□□□□ 0.56
GPC1-205ENST00000427506 C1orf61Q13536 156 aa18.52■□□□□ 0.56
GPC1-205ENST00000427506 CAMK2BQ13554 666 aa18.52■□□□□ 0.56
GPC1-205ENST00000427506 ACOX1Q15067 660 aa18.52■□□□□ 0.56
GPC1-205ENST00000427506 PAFAH1B3Q15102 231 aaKnown RBP18.52■□□□□ 0.56
GPC1-205ENST00000427506 AGERQ15109 404 aa18.52■□□□□ 0.56
GPC1-205ENST00000427506 DEFB133Q30KQ1 61 aa18.52■□□□□ 0.56
GPC1-205ENST00000427506 NCBP2-AS2Q69YL0 99 aa18.52■□□□□ 0.56
GPC1-205ENST00000427506 ZCCHC8Q6NZY4 707 aaKnown RBP18.52■□□□□ 0.56
GPC1-205ENST00000427506 ENPP7Q6UWV6 458 aa18.52■□□□□ 0.56
GPC1-205ENST00000427506 LIPIQ6XZB0 460 aa18.52■□□□□ 0.56
GPC1-205ENST00000427506 DPPA4Q7L190 304 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms