RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 RGSL1A5PLK6 1076 aa11.69□□□□□ -0.54
FIRRE-201ENST00000427391 AP3B1O00203 1094 aa11.69□□□□□ -0.54
FIRRE-201ENST00000427391 PPP6CO00743 305 aa11.69□□□□□ -0.54
FIRRE-201ENST00000427391 LIN7AO14910 233 aaPredicted RBP11.69□□□□□ -0.54
FIRRE-201ENST00000427391 RNASEH1O60930 286 aaKnown RBP11.69□□□□□ -0.54
FIRRE-201ENST00000427391 FKBP6O75344 327 aa11.69□□□□□ -0.54
FIRRE-201ENST00000427391 H2AFYO75367 372 aaKnown RBP11.69□□□□□ -0.54
FIRRE-201ENST00000427391 ZNF189O75820 626 aaPredicted RBP11.69□□□□□ -0.54
FIRRE-201ENST00000427391 PAMP19021 973 aa11.69□□□□□ -0.54
FIRRE-201ENST00000427391 CRABP2P29373 138 aa11.69□□□□□ -0.54
FIRRE-201ENST00000427391 HNRNPDQ14103 355 aaKnown RBP11.69□□□□□ -0.54
FIRRE-201ENST00000427391 MGAT5BQ3V5L5 792 aa11.69□□□□□ -0.54
FIRRE-201ENST00000427391 TECRLQ5HYJ1 363 aa11.69□□□□□ -0.54
FIRRE-201ENST00000427391 HECTD2Q5U5R9 776 aa11.69□□□□□ -0.54
FIRRE-201ENST00000427391 TET1Q8NFU7 2136 aa11.69□□□□□ -0.54
FIRRE-201ENST00000427391 OR52K2Q8NGK3 314 aa11.69□□□□□ -0.54
FIRRE-201ENST00000427391 OR13C4Q8NGS5 318 aa11.69□□□□□ -0.54
FIRRE-201ENST00000427391 ARRDC2Q8TBH0 407 aa11.69□□□□□ -0.54
FIRRE-201ENST00000427391 GATA6Q92908 595 aa11.69□□□□□ -0.54
FIRRE-201ENST00000427391 TUBGCP5Q96RT8 1024 aa11.69□□□□□ -0.54
FIRRE-201ENST00000427391 SEMA3CQ99985 751 aa11.69□□□□□ -0.54
FIRRE-201ENST00000427391 MRPL57Q9BQC6 102 aaKnown RBP11.69□□□□□ -0.54
FIRRE-201ENST00000427391 MARCH2Q9P0N8 246 aa11.69□□□□□ -0.54
FIRRE-201ENST00000427391 AK5Q9Y6K8 562 aa11.69□□□□□ -0.54
FIRRE-201ENST00000427391 A0A0D9SEW6 157 aa11.69□□□□□ -0.54
FIRRE-201ENST00000427391 A0A0U1RQS6 177 aa11.69□□□□□ -0.54
FIRRE-201ENST00000427391 HEATR9A2RTY3 570 aa11.69□□□□□ -0.54
FIRRE-201ENST00000427391 SCAMP3O14828 347 aaKnown RBP11.69□□□□□ -0.54
FIRRE-201ENST00000427391 OAZ2O95190 189 aa11.69□□□□□ -0.54
FIRRE-201ENST00000427391 THRAP10827 490 aa11.69□□□□□ -0.54
FIRRE-201ENST00000427391 RENBPP51606 427 aa11.69□□□□□ -0.54
FIRRE-201ENST00000427391 CCNHP51946 323 aaPredicted RBP11.69□□□□□ -0.54
FIRRE-201ENST00000427391 CDH13P55290 713 aa11.69□□□□□ -0.54
FIRRE-201ENST00000427391 METTL21CQ5VZV1 264 aa11.69□□□□□ -0.54
FIRRE-201ENST00000427391 OR52E8Q6IFG1 317 aa11.69□□□□□ -0.54
FIRRE-201ENST00000427391 TRAF7Q6Q0C0 670 aa11.69□□□□□ -0.54
FIRRE-201ENST00000427391 TMEM173Q86WV6 379 aaPredicted RBP11.69□□□□□ -0.54
FIRRE-201ENST00000427391 CILP2Q8IUL8 1156 aa11.69□□□□□ -0.54
FIRRE-201ENST00000427391 KYQ8NBH2 561 aa11.69□□□□□ -0.54
FIRRE-201ENST00000427391 HMGCLL1Q8TB92 370 aa11.69□□□□□ -0.54
FIRRE-201ENST00000427391 SLC45A3Q96JT2 553 aa11.69□□□□□ -0.54
FIRRE-201ENST00000427391 DNAJC1Q96KC8 554 aaKnown RBP11.69□□□□□ -0.54
FIRRE-201ENST00000427391 EXOC2Q96KP1 924 aa11.69□□□□□ -0.54
FIRRE-201ENST00000427391 ZNF385DQ9H6B1 395 aa11.69□□□□□ -0.54
FIRRE-201ENST00000427391 CLIC5Q9NZA1 410 aa11.69□□□□□ -0.54
FIRRE-201ENST00000427391 NCKIPSDQ9NZQ3 722 aa11.69□□□□□ -0.54
FIRRE-201ENST00000427391 GIMAP2Q9UG22 337 aa11.69□□□□□ -0.54
FIRRE-201ENST00000427391 PTGDR2Q9Y5Y4 395 aa11.69□□□□□ -0.54
FIRRE-201ENST00000427391 ENO4A6NNW6 628 aa11.68□□□□□ -0.54
FIRRE-201ENST00000427391 COL6A2P12110 1019 aa11.68□□□□□ -0.54
FIRRE-201ENST00000427391 RHOQP17081 205 aa11.68□□□□□ -0.54
FIRRE-201ENST00000427391 DNAJB2P25686 324 aa11.68□□□□□ -0.54
FIRRE-201ENST00000427391 POU4F1Q01851 419 aa11.68□□□□□ -0.54
FIRRE-201ENST00000427391 SEMA3AQ14563 771 aa11.68□□□□□ -0.54
FIRRE-201ENST00000427391 POLD3Q15054 466 aaPredicted RBP11.68□□□□□ -0.54
FIRRE-201ENST00000427391 PTPRRQ15256 657 aa11.68□□□□□ -0.54
FIRRE-201ENST00000427391 FOXB2Q5VYV0 432 aa11.68□□□□□ -0.54
FIRRE-201ENST00000427391 NADSYN1Q6IA69 706 aa11.68□□□□□ -0.54
FIRRE-201ENST00000427391 SLC24A5Q71RS6 500 aa11.68□□□□□ -0.54
FIRRE-201ENST00000427391 DCP1BQ8IZD4 617 aaKnown RBP11.68□□□□□ -0.54
FIRRE-201ENST00000427391 PCDH20Q8N6Y1 951 aaKnown RBP11.68□□□□□ -0.54
FIRRE-201ENST00000427391 ITFG2Q969R8 447 aa11.68□□□□□ -0.54
FIRRE-201ENST00000427391 NSMCE3Q96MG7 304 aa11.68□□□□□ -0.54
FIRRE-201ENST00000427391 FAM193BQ96PV7 902 aaPredicted RBP11.68□□□□□ -0.54
FIRRE-201ENST00000427391 CYP2S1Q96SQ9 504 aa11.68□□□□□ -0.54
FIRRE-201ENST00000427391 FBRSL1Q9HCM7 1045 aaKnown RBP11.68□□□□□ -0.54
FIRRE-201ENST00000427391 RGS18Q9NS28 235 aa11.68□□□□□ -0.54
FIRRE-201ENST00000427391 PCDHB5Q9Y5E4 795 aa11.68□□□□□ -0.54
FIRRE-201ENST00000427391 FNDC1Q4ZHG4 1894 aaPredicted RBP11.68□□□□□ -0.54
FIRRE-201ENST00000427391 TCAF2A6NFQ2 919 aa11.68□□□□□ -0.54
FIRRE-201ENST00000427391 UBFD1O14562 309 aaKnown RBP11.68□□□□□ -0.54
FIRRE-201ENST00000427391 CA12O43570 354 aa11.68□□□□□ -0.54
FIRRE-201ENST00000427391 VNN2O95498 520 aa11.68□□□□□ -0.54
FIRRE-201ENST00000427391 S1PR4O95977 384 aa11.68□□□□□ -0.54
FIRRE-201ENST00000427391 ATXN1LP0C7T5 689 aaKnown RBP11.68□□□□□ -0.54
FIRRE-201ENST00000427391 ATP5F1P24539 256 aaPredicted RBP11.68□□□□□ -0.54
FIRRE-201ENST00000427391 YWHAQP27348 245 aa11.68□□□□□ -0.54
FIRRE-201ENST00000427391 OR1E1P30953 314 aa11.68□□□□□ -0.54
FIRRE-201ENST00000427391 ACLYP53396 1101 aa11.68□□□□□ -0.54
FIRRE-201ENST00000427391 PRAMEP78395 509 aa11.68□□□□□ -0.54
FIRRE-201ENST00000427391 FAM83EQ2M2I3 478 aa11.68□□□□□ -0.54
FIRRE-201ENST00000427391 GRAMD1BQ3KR37 738 aa11.68□□□□□ -0.54
FIRRE-201ENST00000427391 RNF19BQ6ZMZ0 732 aa11.68□□□□□ -0.54
FIRRE-201ENST00000427391 SDCCAG8Q86SQ7 713 aaPredicted RBP11.68□□□□□ -0.54
FIRRE-201ENST00000427391 KBTBD6Q86V97 674 aa11.68□□□□□ -0.54
FIRRE-201ENST00000427391 OR9I1Q8NGQ6 314 aa11.68□□□□□ -0.54
FIRRE-201ENST00000427391 C1orf74Q96LT6 269 aa11.68□□□□□ -0.54
FIRRE-201ENST00000427391 ATP13A1Q9HD20 1204 aa11.68□□□□□ -0.54
FIRRE-201ENST00000427391 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.68□□□□□ -0.54
FIRRE-201ENST00000427391 TMEM248Q9NWD8 314 aa11.68□□□□□ -0.54
FIRRE-201ENST00000427391 FNDC3AQ9Y2H6 1198 aaKnown RBP11.68□□□□□ -0.54
FIRRE-201ENST00000427391 C9JVG2 144 aa11.67□□□□□ -0.54
FIRRE-201ENST00000427391 LDB2O43679 373 aa11.67□□□□□ -0.54
FIRRE-201ENST00000427391 RAMP2O60895 175 aa11.67□□□□□ -0.54
FIRRE-201ENST00000427391 LYNP07948 512 aa11.67□□□□□ -0.54
FIRRE-201ENST00000427391 CALRP27797 417 aaKnown RBP11.67□□□□□ -0.54
FIRRE-201ENST00000427391 DUSP4Q13115 394 aa11.67□□□□□ -0.54
FIRRE-201ENST00000427391 ZRSR2Q15696 482 aaKnown RBP11.67□□□□□ -0.54
FIRRE-201ENST00000427391 MSANTD2Q6P1R3 559 aa11.67□□□□□ -0.54
FIRRE-201ENST00000427391 LAYNQ6UX15 382 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms