RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 CSPG4P5Q96PW8 444 aa9.36□□□□□ -0.91
NUP50-206ENST00000422489 TUBGCP5Q96RT8 1024 aa9.36□□□□□ -0.91
NUP50-206ENST00000422489 APOOQ9BUR5 198 aa9.36□□□□□ -0.91
NUP50-206ENST00000422489 XPO4Q9C0E2 1151 aaKnown RBP9.36□□□□□ -0.91
NUP50-206ENST00000422489 CTTNBP2NLQ9P2B4 639 aa9.36□□□□□ -0.91
NUP50-206ENST00000422489 GULP1Q9UBP9 304 aa9.36□□□□□ -0.91
NUP50-206ENST00000422489 APOBEC3BQ9UH17 382 aaKnown RBP9.36□□□□□ -0.91
NUP50-206ENST00000422489 SALL4Q9UJQ4 1053 aa9.36□□□□□ -0.91
NUP50-206ENST00000422489 PCDHGC4Q9Y5F7 938 aa9.36□□□□□ -0.91
NUP50-206ENST00000422489 CSNK1G3Q9Y6M4 447 aa9.36□□□□□ -0.91
NUP50-206ENST00000422489 AKAP13Q12802 2813 aa9.36□□□□□ -0.91
NUP50-206ENST00000422489 TMEM110-MUSTN1A8MSY1 372 aa9.35□□□□□ -0.91
NUP50-206ENST00000422489 TOR1BO14657 336 aa9.35□□□□□ -0.91
NUP50-206ENST00000422489 MUSKO15146 869 aa9.35□□□□□ -0.91
NUP50-206ENST00000422489 YY2O15391 372 aa9.35□□□□□ -0.91
NUP50-206ENST00000422489 GCATO75600 419 aa9.35□□□□□ -0.91
NUP50-206ENST00000422489 TNFP01375 233 aa9.35□□□□□ -0.91
NUP50-206ENST00000422489 CYP1A2P05177 515 aa9.35□□□□□ -0.91
NUP50-206ENST00000422489 TPM3P06753 285 aa9.35□□□□□ -0.91
NUP50-206ENST00000422489 HTR1BP28222 390 aa9.35□□□□□ -0.91
NUP50-206ENST00000422489 CDH6P55285 790 aa9.35□□□□□ -0.91
NUP50-206ENST00000422489 ITKQ08881 620 aa9.35□□□□□ -0.91
NUP50-206ENST00000422489 ACOX1Q15067 660 aa9.35□□□□□ -0.91
NUP50-206ENST00000422489 DPYSL2Q16555 572 aa9.35□□□□□ -0.91
NUP50-206ENST00000422489 TSR1Q2NL82 804 aaKnown RBP9.35□□□□□ -0.91
NUP50-206ENST00000422489 SKOR2Q2VWA4 1001 aaPredicted RBP9.35□□□□□ -0.91
NUP50-206ENST00000422489 ATP13A4Q4VNC1 1196 aa9.35□□□□□ -0.91
NUP50-206ENST00000422489 ZFYVE27Q5T4F4 411 aa9.35□□□□□ -0.91
NUP50-206ENST00000422489 TMCO4Q5TGY1 634 aa9.35□□□□□ -0.91
NUP50-206ENST00000422489 MARC1Q5VT66 337 aa9.35□□□□□ -0.91
NUP50-206ENST00000422489 DENND2CQ68D51 928 aa9.35□□□□□ -0.91
NUP50-206ENST00000422489 ZCCHC8Q6NZY4 707 aaKnown RBP9.35□□□□□ -0.91
NUP50-206ENST00000422489 CRTC1Q6UUV9 634 aa9.35□□□□□ -0.91
NUP50-206ENST00000422489 EFL1Q7Z2Z2 1120 aaKnown RBP9.35□□□□□ -0.91
NUP50-206ENST00000422489 BBS5Q8N3I7 341 aa9.35□□□□□ -0.91
NUP50-206ENST00000422489 KCTD6Q8NC69 237 aa9.35□□□□□ -0.91
NUP50-206ENST00000422489 NXPE2Q96DL1 559 aa9.35□□□□□ -0.91
NUP50-206ENST00000422489 IQCDQ96DY2 449 aa9.35□□□□□ -0.91
NUP50-206ENST00000422489 ZNF599Q96NL3 588 aa9.35□□□□□ -0.91
NUP50-206ENST00000422489 PSKH2Q96QS6 385 aa9.35□□□□□ -0.91
NUP50-206ENST00000422489 NRSN2Q9GZP1 204 aa9.35□□□□□ -0.91
NUP50-206ENST00000422489 PCDH18Q9HCL0 1135 aa9.35□□□□□ -0.91
NUP50-206ENST00000422489 SCUBE2Q9NQ36 999 aa9.35□□□□□ -0.91
NUP50-206ENST00000422489 GPR27Q9NS67 375 aa9.35□□□□□ -0.91
NUP50-206ENST00000422489 ZNHIT6Q9NWK9 470 aaKnown RBP9.35□□□□□ -0.91
NUP50-206ENST00000422489 MOSPD1Q9UJG1 213 aa9.35□□□□□ -0.91
NUP50-206ENST00000422489 ATP8A1Q9Y2Q0 1164 aa9.35□□□□□ -0.91
NUP50-206ENST00000422489 GPSM3Q9Y4H4 160 aa9.35□□□□□ -0.91
NUP50-206ENST00000422489 OR1A2Q9Y585 309 aa9.35□□□□□ -0.91
NUP50-206ENST00000422489 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.35□□□□□ -0.91
NUP50-206ENST00000422489 PCNX2A6NKB5 2137 aa9.35□□□□□ -0.91
NUP50-206ENST00000422489 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.34□□□□□ -0.91
NUP50-206ENST00000422489 TSPAN11A1L157 253 aa9.34□□□□□ -0.91
NUP50-206ENST00000422489 TPP1O14773 563 aa9.34□□□□□ -0.91
NUP50-206ENST00000422489 CBFA2T2O43439 604 aa9.34□□□□□ -0.91
NUP50-206ENST00000422489 RECQL5O94762 991 aaPredicted RBP9.34□□□□□ -0.91
NUP50-206ENST00000422489 RASGRP1O95267 797 aa9.34□□□□□ -0.91
NUP50-206ENST00000422489 GYPCP04921 128 aa9.34□□□□□ -0.91
NUP50-206ENST00000422489 ELFN1P0C7U0 828 aa9.34□□□□□ -0.91
NUP50-206ENST00000422489 TSHRP16473 764 aa9.34□□□□□ -0.91
NUP50-206ENST00000422489 RPIAP49247 311 aa9.34□□□□□ -0.91
NUP50-206ENST00000422489 PEX5P50542 639 aa9.34□□□□□ -0.91
NUP50-206ENST00000422489 BLKP51451 505 aa9.34□□□□□ -0.91
NUP50-206ENST00000422489 SRP54P61011 504 aaKnown RBP9.34□□□□□ -0.91
NUP50-206ENST00000422489 MAXP61244 160 aa9.34□□□□□ -0.91
NUP50-206ENST00000422489 AP1S1P61966 158 aa9.34□□□□□ -0.91
NUP50-206ENST00000422489 MMRN1Q13201 1228 aa9.34□□□□□ -0.91
NUP50-206ENST00000422489 NR0B2Q15466 257 aa9.34□□□□□ -0.91
NUP50-206ENST00000422489 ESRP1Q6NXG1 681 aaKnown RBP9.34□□□□□ -0.91
NUP50-206ENST00000422489 GUSBP11Q6P575 273 aa9.34□□□□□ -0.91
NUP50-206ENST00000422489 MACC1Q6ZN28 852 aa9.34□□□□□ -0.91
NUP50-206ENST00000422489 LRRC69Q6ZNQ3 347 aa9.34□□□□□ -0.91
NUP50-206ENST00000422489 NYAP1Q6ZVC0 841 aa9.34□□□□□ -0.91
NUP50-206ENST00000422489 ATPAF2Q8N5M1 289 aa9.34□□□□□ -0.91
NUP50-206ENST00000422489 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.34□□□□□ -0.91
NUP50-206ENST00000422489 DCBLD1Q8N8Z6 715 aa9.34□□□□□ -0.91
NUP50-206ENST00000422489 FAM181AQ8N9Y4 354 aa9.34□□□□□ -0.91
NUP50-206ENST00000422489 PLA2G15Q8NCC3 412 aa9.34□□□□□ -0.91
NUP50-206ENST00000422489 ATL2Q8NHH9 583 aa9.34□□□□□ -0.91
NUP50-206ENST00000422489 TEKT4Q8WW24 435 aa9.34□□□□□ -0.91
NUP50-206ENST00000422489 SCG3Q8WXD2 468 aaKnown RBP9.34□□□□□ -0.91
NUP50-206ENST00000422489 RFFLQ8WZ73 363 aa9.34□□□□□ -0.91
NUP50-206ENST00000422489 NSMCE3Q96MG7 304 aa9.34□□□□□ -0.91
NUP50-206ENST00000422489 DEF6Q9H4E7 631 aa9.34□□□□□ -0.91
NUP50-206ENST00000422489 SYNDIG1Q9H7V2 258 aa9.34□□□□□ -0.91
NUP50-206ENST00000422489 USP29Q9HBJ7 922 aa9.34□□□□□ -0.91
NUP50-206ENST00000422489 NOD2Q9HC29 1040 aa9.34□□□□□ -0.91
NUP50-206ENST00000422489 NT5MQ9NPB1 228 aa9.34□□□□□ -0.91
NUP50-206ENST00000422489 NCKIPSDQ9NZQ3 722 aa9.34□□□□□ -0.91
NUP50-206ENST00000422489 DKK4Q9UBT3 224 aa9.34□□□□□ -0.91
NUP50-206ENST00000422489 PNMA8BQ9ULN7 279 aaPredicted RBP9.34□□□□□ -0.91
NUP50-206ENST00000422489 PADI4Q9UM07 663 aa9.34□□□□□ -0.91
NUP50-206ENST00000422489 MAP1BP46821 2468 aaKnown RBP9.34□□□□□ -0.91
NUP50-206ENST00000422489 USP24Q9UPU5 2620 aa9.33□□□□□ -0.92
NUP50-206ENST00000422489 LY6G6EA0A0G2JKS1 128 aa9.33□□□□□ -0.92
NUP50-206ENST00000422489 EME2A4GXA9 379 aaPredicted RBP9.33□□□□□ -0.92
NUP50-206ENST00000422489 CFAP69A5D8W1 941 aa9.33□□□□□ -0.92
NUP50-206ENST00000422489 LMO7DNF2Z398 122 aa9.33□□□□□ -0.92
NUP50-206ENST00000422489 CACNB4O00305 520 aaPredicted RBP9.33□□□□□ -0.92
NUP50-206ENST00000422489 RRP8O43159 456 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms