RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 ZSWIM9Q86XI8 627 aa15.87■□□□□ 0.13
BRAT1-202ENST00000421712 SKA1Q96BD8 255 aa15.87■□□□□ 0.13
BRAT1-202ENST00000421712 ECHDC3Q96DC8 303 aa15.87■□□□□ 0.13
BRAT1-202ENST00000421712 SLC6A18Q96N87 628 aa15.87■□□□□ 0.13
BRAT1-202ENST00000421712 MYOCQ99972 504 aa15.87■□□□□ 0.13
BRAT1-202ENST00000421712 GTPBP2Q9BX10 602 aaKnown RBP15.87■□□□□ 0.13
BRAT1-202ENST00000421712 SLC17A9Q9BYT1 436 aa15.87■□□□□ 0.13
BRAT1-202ENST00000421712 CARD9Q9H257 536 aa15.87■□□□□ 0.13
BRAT1-202ENST00000421712 EBF2Q9HAK2 575 aa15.87■□□□□ 0.13
BRAT1-202ENST00000421712 PHTF1Q9UMS5 762 aa15.87■□□□□ 0.13
BRAT1-202ENST00000421712 ZFR2Q9UPR6 939 aaKnown RBP15.87■□□□□ 0.13
BRAT1-202ENST00000421712 DMTF1Q9Y222 760 aa15.87■□□□□ 0.13
BRAT1-202ENST00000421712 CHKBQ9Y259 395 aa15.87■□□□□ 0.13
BRAT1-202ENST00000421712 JRKLQ9Y4A0 524 aa15.87■□□□□ 0.13
BRAT1-202ENST00000421712 FAM186AA6NE01 2351 aa15.87■□□□□ 0.13
BRAT1-202ENST00000421712 TNRC6BQ9UPQ9 1833 aaKnown RBP15.87■□□□□ 0.13
BRAT1-202ENST00000421712 TCRBV7S2A1N4TA0A589 114 aa15.86■□□□□ 0.13
BRAT1-202ENST00000421712 RIOK3O14730 519 aaKnown RBP15.86■□□□□ 0.13
BRAT1-202ENST00000421712 AREL1O15033 823 aa15.86■□□□□ 0.13
BRAT1-202ENST00000421712 KCNN4O15554 427 aa15.86■□□□□ 0.13
BRAT1-202ENST00000421712 HTRA2O43464 458 aaPredicted RBP15.86■□□□□ 0.13
BRAT1-202ENST00000421712 LATO43561 262 aa15.86■□□□□ 0.13
BRAT1-202ENST00000421712 CEP104O60308 925 aa15.86■□□□□ 0.13
BRAT1-202ENST00000421712 TM7SF2O76062 418 aa15.86■□□□□ 0.13
BRAT1-202ENST00000421712 PGLSO95336 258 aa15.86■□□□□ 0.13
BRAT1-202ENST00000421712 SYPP08247 313 aa15.86■□□□□ 0.13
BRAT1-202ENST00000421712 AKT2P31751 481 aa15.86■□□□□ 0.13
BRAT1-202ENST00000421712 CXCR5P32302 372 aa15.86■□□□□ 0.13
BRAT1-202ENST00000421712 C21orf59P57076 290 aa15.86■□□□□ 0.13
BRAT1-202ENST00000421712 RACK1P63244 317 aaKnown RBP15.86■□□□□ 0.13
BRAT1-202ENST00000421712 SLC13A5Q86YT5 568 aaPredicted RBP15.86■□□□□ 0.13
BRAT1-202ENST00000421712 SLC35F6Q8N357 371 aa15.86■□□□□ 0.13
BRAT1-202ENST00000421712 ARRDC2Q8TBH0 407 aa15.86■□□□□ 0.13
BRAT1-202ENST00000421712 TEKT5Q96M29 485 aa15.86■□□□□ 0.13
BRAT1-202ENST00000421712 RBM15Q96T37 977 aaKnown RBP eCLIP15.86■□□□□ 0.13
BRAT1-202ENST00000421712 VAT1Q99536 393 aa15.86■□□□□ 0.13
BRAT1-202ENST00000421712 TLR10Q9BXR5 811 aa15.86■□□□□ 0.13
BRAT1-202ENST00000421712 SLC25A51Q9H1U9 297 aa15.86■□□□□ 0.13
BRAT1-202ENST00000421712 GLOD4Q9HC38 313 aa15.86■□□□□ 0.13
BRAT1-202ENST00000421712 FZD3Q9NPG1 666 aa15.86■□□□□ 0.13
BRAT1-202ENST00000421712 SLCO1B1Q9Y6L6 691 aa15.86■□□□□ 0.13
BRAT1-202ENST00000421712 DOCK9Q9BZ29 2069 aa15.86■□□□□ 0.13
BRAT1-202ENST00000421712 USP27XA6NNY8 438 aa15.85■□□□□ 0.13
BRAT1-202ENST00000421712 F5H423 210 aaPredicted RBP15.85■□□□□ 0.13
BRAT1-202ENST00000421712 PRAMEF26H0Y7S4 382 aa15.85■□□□□ 0.13
BRAT1-202ENST00000421712 LZTS3O60299 673 aaPredicted RBP15.85■□□□□ 0.13
BRAT1-202ENST00000421712 CTPS1P17812 591 aa15.85■□□□□ 0.13
BRAT1-202ENST00000421712 HNRNPA2B1P22626 353 aaKnown RBP15.85■□□□□ 0.13
BRAT1-202ENST00000421712 CD38P28907 300 aa15.85■□□□□ 0.13
BRAT1-202ENST00000421712 TNNT3P45378 269 aaPredicted RBP15.85■□□□□ 0.13
BRAT1-202ENST00000421712 LMNB2Q03252 620 aa15.85■□□□□ 0.13
BRAT1-202ENST00000421712 WASHC5Q12768 1159 aa15.85■□□□□ 0.13
BRAT1-202ENST00000421712 PCSK7Q16549 785 aa15.85■□□□□ 0.13
BRAT1-202ENST00000421712 TMEM52BQ4KMG9 183 aa15.85■□□□□ 0.13
BRAT1-202ENST00000421712 ALG1LQ6GMV1 187 aa15.85■□□□□ 0.13
BRAT1-202ENST00000421712 NAPEPLDQ6IQ20 393 aa15.85■□□□□ 0.13
BRAT1-202ENST00000421712 LAYNQ6UX15 382 aa15.85■□□□□ 0.13
BRAT1-202ENST00000421712 KDELC2Q7Z4H8 507 aa15.85■□□□□ 0.13
BRAT1-202ENST00000421712 ZSCAN30Q86W11 494 aa15.85■□□□□ 0.13
BRAT1-202ENST00000421712 ZNF567Q8N184 647 aa15.85■□□□□ 0.13
BRAT1-202ENST00000421712 ORAI3Q9BRQ5 295 aa15.85■□□□□ 0.13
BRAT1-202ENST00000421712 EDEM2Q9BV94 578 aa15.85■□□□□ 0.13
BRAT1-202ENST00000421712 C1QTNF7Q9BXJ2 289 aa15.85■□□□□ 0.13
BRAT1-202ENST00000421712 PCDH9Q9HC56 1237 aa15.85■□□□□ 0.13
BRAT1-202ENST00000421712 UBP1Q9NZI7 540 aa15.85■□□□□ 0.13
BRAT1-202ENST00000421712 RSPH14Q9UHP6 348 aa15.85■□□□□ 0.13
BRAT1-202ENST00000421712 TRHDEQ9UKU6 1024 aa15.85■□□□□ 0.13
BRAT1-202ENST00000421712 R3HDM2Q9Y2K5 976 aaKnown RBP15.85■□□□□ 0.13
BRAT1-202ENST00000421712 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.85■□□□□ 0.13
BRAT1-202ENST00000421712 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.84■□□□□ 0.13
BRAT1-202ENST00000421712 A0A1B0GVT2 93 aa15.84■□□□□ 0.13
BRAT1-202ENST00000421712 GOLGA8CPA6NN73 597 aa15.84■□□□□ 0.13
BRAT1-202ENST00000421712 SPINT1O43278 529 aa15.84■□□□□ 0.13
BRAT1-202ENST00000421712 MMP2P08253 660 aa15.84■□□□□ 0.13
BRAT1-202ENST00000421712 PDHA1P08559 390 aa15.84■□□□□ 0.13
BRAT1-202ENST00000421712 CYP2A6P11509 494 aaPredicted RBP15.84■□□□□ 0.13
BRAT1-202ENST00000421712 ENGP17813 658 aa15.84■□□□□ 0.13
BRAT1-202ENST00000421712 LIG3P49916 1009 aa15.84■□□□□ 0.13
BRAT1-202ENST00000421712 SKOR1P84550 965 aa15.84■□□□□ 0.13
BRAT1-202ENST00000421712 KLF1Q13351 362 aaPredicted RBP15.84■□□□□ 0.13
BRAT1-202ENST00000421712 LONRF2Q1L5Z9 754 aa15.84■□□□□ 0.13
BRAT1-202ENST00000421712 TMEM259Q4ZIN3 620 aa15.84■□□□□ 0.13
BRAT1-202ENST00000421712 DENND2CQ68D51 928 aa15.84■□□□□ 0.13
BRAT1-202ENST00000421712 CCDC70Q6NSX1 233 aa15.84■□□□□ 0.13
BRAT1-202ENST00000421712 USP45Q70EL2 814 aa15.84■□□□□ 0.13
BRAT1-202ENST00000421712 LPCAT1Q8NF37 534 aa15.84■□□□□ 0.13
BRAT1-202ENST00000421712 SPATA22Q8NHS9 363 aa15.84■□□□□ 0.13
BRAT1-202ENST00000421712 C1orf216Q8TAB5 229 aa15.84■□□□□ 0.13
BRAT1-202ENST00000421712 RMDN1Q96DB5 314 aa15.84■□□□□ 0.13
BRAT1-202ENST00000421712 IFT43Q96FT9 208 aa15.84■□□□□ 0.13
BRAT1-202ENST00000421712 IMP4Q96G21 291 aaKnown RBP15.84■□□□□ 0.13
BRAT1-202ENST00000421712 TDRD1Q9BXT4 1180 aaKnown RBP15.84■□□□□ 0.13
BRAT1-202ENST00000421712 ADGRE3Q9BY15 652 aa15.84■□□□□ 0.13
BRAT1-202ENST00000421712 CAPN10Q9HC96 672 aa15.84■□□□□ 0.13
BRAT1-202ENST00000421712 B4GALT6Q9UBX8 382 aa15.84■□□□□ 0.13
BRAT1-202ENST00000421712 CA5BQ9Y2D0 317 aa15.84■□□□□ 0.13
BRAT1-202ENST00000421712 COQ6Q9Y2Z9 468 aa15.84■□□□□ 0.13
BRAT1-202ENST00000421712 LNP1A1A4G5 178 aa15.83■□□□□ 0.12
BRAT1-202ENST00000421712 ARHGAP33O14559 1287 aa15.83■□□□□ 0.12
BRAT1-202ENST00000421712 WNT9AO14904 365 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 325.4 ms