RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 PLPP6Q8IY26 295 aa20.91■□□□□ 0.94
CASC3-203ENST00000418132 BLOC1S5Q8TDH9 187 aa20.91■□□□□ 0.94
CASC3-203ENST00000418132 PEX13Q92968 403 aa20.91■□□□□ 0.94
CASC3-203ENST00000418132 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.91■□□□□ 0.94
CASC3-203ENST00000418132 SLC17A6Q9P2U8 582 aa20.91■□□□□ 0.94
CASC3-203ENST00000418132 KIAA1549LQ6ZVL6 1849 aa20.91■□□□□ 0.94
CASC3-203ENST00000418132 PRKCGP05129 697 aa20.9■□□□□ 0.94
CASC3-203ENST00000418132 ATP5BP06576 529 aaKnown RBP20.9■□□□□ 0.94
CASC3-203ENST00000418132 SRPRAP08240 638 aaKnown RBP20.9■□□□□ 0.94
CASC3-203ENST00000418132 DLDP09622 509 aaKnown RBP20.9■□□□□ 0.94
CASC3-203ENST00000418132 CREB1P16220 341 aa20.9■□□□□ 0.94
CASC3-203ENST00000418132 ARNTP27540 789 aa20.9■□□□□ 0.94
CASC3-203ENST00000418132 SERPINB9P50453 376 aa20.9■□□□□ 0.94
CASC3-203ENST00000418132 QPCTQ16769 361 aa20.9■□□□□ 0.94
CASC3-203ENST00000418132 MYLK3Q32MK0 819 aa20.9■□□□□ 0.94
CASC3-203ENST00000418132 ACCSLQ4AC99 568 aa20.9■□□□□ 0.94
CASC3-203ENST00000418132 HSP90AA5PQ58FG0 334 aa20.9■□□□□ 0.94
CASC3-203ENST00000418132 CARD16Q5EG05 197 aa20.9■□□□□ 0.94
CASC3-203ENST00000418132 PACS1Q6VY07 963 aa20.9■□□□□ 0.94
CASC3-203ENST00000418132 PDCD6IPQ8WUM4 868 aaKnown RBP20.9■□□□□ 0.94
CASC3-203ENST00000418132 SORCS1Q8WY21 1168 aa20.9■□□□□ 0.94
CASC3-203ENST00000418132 MYLIPQ8WY64 445 aa20.9■□□□□ 0.94
CASC3-203ENST00000418132 MYO19Q96H55 970 aa20.9■□□□□ 0.94
CASC3-203ENST00000418132 CIPCQ9C0C6 399 aa20.9■□□□□ 0.94
CASC3-203ENST00000418132 RABEP2Q9H5N1 569 aa20.9■□□□□ 0.94
CASC3-203ENST00000418132 ATP13A3Q9H7F0 1226 aa20.9■□□□□ 0.94
CASC3-203ENST00000418132 EPS15L1Q9UBC2 864 aa20.9■□□□□ 0.94
CASC3-203ENST00000418132 HECAQ9UBI9 543 aaPredicted RBP20.9■□□□□ 0.94
CASC3-203ENST00000418132 CD207Q9UJ71 328 aa20.9■□□□□ 0.94
CASC3-203ENST00000418132 RIMKLBQ9ULI2 386 aa20.9■□□□□ 0.94
CASC3-203ENST00000418132 USP15Q9Y4E8 981 aaPredicted RBP20.9■□□□□ 0.94
CASC3-203ENST00000418132 PCDHB9Q9Y5E1 797 aa20.9■□□□□ 0.94
CASC3-203ENST00000418132 PSAT1Q9Y617 370 aa20.9■□□□□ 0.94
CASC3-203ENST00000418132 KRT37O76014 449 aa20.9■□□□□ 0.94
CASC3-203ENST00000418132 VAPBO95292 243 aa20.9■□□□□ 0.94
CASC3-203ENST00000418132 PGLSO95336 258 aa20.9■□□□□ 0.94
CASC3-203ENST00000418132 LSP1P33241 339 aa20.9■□□□□ 0.94
CASC3-203ENST00000418132 RPL26P61254 145 aaKnown RBP20.9■□□□□ 0.94
CASC3-203ENST00000418132 PPARDQ03181 441 aa20.9■□□□□ 0.94
CASC3-203ENST00000418132 ACVR1Q04771 509 aa20.9■□□□□ 0.94
CASC3-203ENST00000418132 MESP2Q0VG99 397 aa20.9■□□□□ 0.94
CASC3-203ENST00000418132 ARMC12Q5T9G4 340 aa20.9■□□□□ 0.94
CASC3-203ENST00000418132 LGSNQ5TDP6 509 aa20.9■□□□□ 0.94
CASC3-203ENST00000418132 GRAMD4Q6IC98 578 aa20.9■□□□□ 0.94
CASC3-203ENST00000418132 MTSS1LQ765P7 747 aa20.9■□□□□ 0.94
CASC3-203ENST00000418132 MICALL1Q8N3F8 863 aa20.9■□□□□ 0.94
CASC3-203ENST00000418132 OR13J1Q8NGT2 312 aa20.9■□□□□ 0.94
CASC3-203ENST00000418132 BCAS4Q8TDM0 211 aa20.9■□□□□ 0.94
CASC3-203ENST00000418132 FRS2Q8WU20 508 aa20.9■□□□□ 0.94
CASC3-203ENST00000418132 CYB5D2Q8WUJ1 264 aa20.9■□□□□ 0.94
CASC3-203ENST00000418132 TUBGCP5Q96RT8 1024 aa20.9■□□□□ 0.94
CASC3-203ENST00000418132 RPP25Q9BUL9 199 aaKnown RBP20.9■□□□□ 0.94
CASC3-203ENST00000418132 GTSE1Q9NYZ3 720 aa20.9■□□□□ 0.94
CASC3-203ENST00000418132 RPL26L1Q9UNX3 145 aaKnown RBP20.9■□□□□ 0.94
CASC3-203ENST00000418132 SPO11Q9Y5K1 396 aa20.9■□□□□ 0.94
CASC3-203ENST00000418132 A0A1W2PPM1 405 aa20.89■□□□□ 0.93
CASC3-203ENST00000418132 SOX1O00570 391 aaPredicted RBP20.89■□□□□ 0.93
CASC3-203ENST00000418132 KRT38O76015 456 aa20.89■□□□□ 0.93
CASC3-203ENST00000418132 SNRPAP09012 282 aaKnown RBP20.89■□□□□ 0.93
CASC3-203ENST00000418132 PIRTP0C851 137 aa20.89■□□□□ 0.93
CASC3-203ENST00000418132 CNTFP26441 200 aa20.89■□□□□ 0.93
CASC3-203ENST00000418132 GKP32189 559 aa20.89■□□□□ 0.93
CASC3-203ENST00000418132 NNMTP40261 264 aa20.89■□□□□ 0.93
CASC3-203ENST00000418132 MLLT1Q03111 559 aaPredicted RBP20.89■□□□□ 0.93
CASC3-203ENST00000418132 SMAD1Q15797 465 aaKnown RBP20.89■□□□□ 0.93
CASC3-203ENST00000418132 PTPRNQ16849 979 aa20.89■□□□□ 0.93
CASC3-203ENST00000418132 CNPY4Q8N129 248 aa20.89■□□□□ 0.93
CASC3-203ENST00000418132 RYBPQ8N488 228 aaPredicted RBP20.89■□□□□ 0.93
CASC3-203ENST00000418132 PIH1D2Q8WWB5 315 aa20.89■□□□□ 0.93
CASC3-203ENST00000418132 AGAP2Q99490 1192 aa20.89■□□□□ 0.93
CASC3-203ENST00000418132 GAS2L1Q99501 681 aaPredicted RBP20.89■□□□□ 0.93
CASC3-203ENST00000418132 CPNE1Q99829 537 aa20.89■□□□□ 0.93
CASC3-203ENST00000418132 CPEB1Q9BZB8 566 aaKnown RBP20.89■□□□□ 0.93
CASC3-203ENST00000418132 TRABDQ9H4I3 376 aa20.89■□□□□ 0.93
CASC3-203ENST00000418132 CNOT10Q9H9A5 744 aaKnown RBP20.89■□□□□ 0.93
CASC3-203ENST00000418132 ELOVL2Q9NXB9 296 aa20.89■□□□□ 0.93
CASC3-203ENST00000418132 PIGNO95427 931 aa20.88■□□□□ 0.93
CASC3-203ENST00000418132 CRTAMO95727 393 aa20.88■□□□□ 0.93
CASC3-203ENST00000418132 BRAFP15056 766 aa20.88■□□□□ 0.93
CASC3-203ENST00000418132 SERPINA4P29622 427 aa20.88■□□□□ 0.93
CASC3-203ENST00000418132 GDI1P31150 447 aa20.88■□□□□ 0.93
CASC3-203ENST00000418132 SLC8A1P32418 973 aa20.88■□□□□ 0.93
CASC3-203ENST00000418132 GJA4P35212 333 aa20.88■□□□□ 0.93
CASC3-203ENST00000418132 GP5P40197 560 aa20.88■□□□□ 0.93
CASC3-203ENST00000418132 GRIA4P48058 902 aa20.88■□□□□ 0.93
CASC3-203ENST00000418132 CCNHP51946 323 aaPredicted RBP20.88■□□□□ 0.93
CASC3-203ENST00000418132 DPY19L3Q6ZPD9 716 aa20.88■□□□□ 0.93
CASC3-203ENST00000418132 Q6ZVU0 165 aa20.88■□□□□ 0.93
CASC3-203ENST00000418132 CNTN4Q8IWV2 1026 aa20.88■□□□□ 0.93
CASC3-203ENST00000418132 PHTF2Q8N3S3 785 aa20.88■□□□□ 0.93
CASC3-203ENST00000418132 MTBPQ96DY7 904 aa20.88■□□□□ 0.93
CASC3-203ENST00000418132 TRMT61BQ9BVS5 477 aaKnown RBP20.88■□□□□ 0.93
CASC3-203ENST00000418132 IARS2Q9NSE4 1012 aaKnown RBP20.88■□□□□ 0.93
CASC3-203ENST00000418132 KCTD3Q9Y597 815 aa20.88■□□□□ 0.93
CASC3-203ENST00000418132 ARL5AQ9Y689 179 aa20.88■□□□□ 0.93
CASC3-203ENST00000418132 HMX2A2RU54 273 aa20.88■□□□□ 0.93
CASC3-203ENST00000418132 WASH3PC4AMC7 463 aa20.88■□□□□ 0.93
CASC3-203ENST00000418132 PRRT4C9JH25 899 aa20.88■□□□□ 0.93
CASC3-203ENST00000418132 ARNTLO00327 626 aa20.88■□□□□ 0.93
CASC3-203ENST00000418132 SIN3BO75182 1162 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms