RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 FZD3Q9NPG1 666 aa12.57□□□□□ -0.4
SKA1-203ENST00000417656 KLHL8Q9P2G9 620 aaPredicted RBP12.57□□□□□ -0.4
SKA1-203ENST00000417656 PCDHB9Q9Y5E1 797 aa12.57□□□□□ -0.4
SKA1-203ENST00000417656 EP300Q09472 2414 aaPredicted RBP12.57□□□□□ -0.4
SKA1-203ENST00000417656 GON4LQ3T8J9 2241 aa12.56□□□□□ -0.4
SKA1-203ENST00000417656 LNP1A1A4G5 178 aa12.56□□□□□ -0.4
SKA1-203ENST00000417656 WNT9AO14904 365 aa12.56□□□□□ -0.4
SKA1-203ENST00000417656 KHNYNO15037 678 aaKnown RBP12.56□□□□□ -0.4
SKA1-203ENST00000417656 SLC31A1O15431 190 aa12.56□□□□□ -0.4
SKA1-203ENST00000417656 MTSS1O43312 755 aa12.56□□□□□ -0.4
SKA1-203ENST00000417656 TSPAN6O43657 245 aa12.56□□□□□ -0.4
SKA1-203ENST00000417656 KIF5CO60282 957 aa12.56□□□□□ -0.4
SKA1-203ENST00000417656 SERPINF2P08697 491 aa12.56□□□□□ -0.4
SKA1-203ENST00000417656 NFKB1P19838 968 aa12.56□□□□□ -0.4
SKA1-203ENST00000417656 CXCR5P32302 372 aa12.56□□□□□ -0.4
SKA1-203ENST00000417656 CD68P34810 354 aaPredicted RBP12.56□□□□□ -0.4
SKA1-203ENST00000417656 SUOXP51687 545 aa12.56□□□□□ -0.4
SKA1-203ENST00000417656 RPS21P63220 83 aaKnown RBP12.56□□□□□ -0.4
SKA1-203ENST00000417656 FAM193AP78312 1265 aa12.56□□□□□ -0.4
SKA1-203ENST00000417656 SKOR1P84550 965 aa12.56□□□□□ -0.4
SKA1-203ENST00000417656 ELP6Q0PNE2 266 aa12.56□□□□□ -0.4
SKA1-203ENST00000417656 RALGDSQ12967 914 aa12.56□□□□□ -0.4
SKA1-203ENST00000417656 FGL2Q14314 439 aa12.56□□□□□ -0.4
SKA1-203ENST00000417656 AASDHQ4L235 1098 aaPredicted RBP12.56□□□□□ -0.4
SKA1-203ENST00000417656 TEX44Q53QW1 395 aa12.56□□□□□ -0.4
SKA1-203ENST00000417656 ARMC12Q5T9G4 340 aa12.56□□□□□ -0.4
SKA1-203ENST00000417656 NAPEPLDQ6IQ20 393 aa12.56□□□□□ -0.4
SKA1-203ENST00000417656 ERAP2Q6P179 960 aa12.56□□□□□ -0.4
SKA1-203ENST00000417656 DARS2Q6PI48 645 aaKnown RBP12.56□□□□□ -0.4
SKA1-203ENST00000417656 SLC23A3Q6PIS1 610 aa12.56□□□□□ -0.4
SKA1-203ENST00000417656 RABEPKQ7Z6M1 372 aa12.56□□□□□ -0.4
SKA1-203ENST00000417656 PRPF39Q86UA1 669 aaKnown RBP12.56□□□□□ -0.4
SKA1-203ENST00000417656 ZNF567Q8N184 647 aa12.56□□□□□ -0.4
SKA1-203ENST00000417656 TTC13Q8NBP0 860 aa12.56□□□□□ -0.4
SKA1-203ENST00000417656 CEP76Q8TAP6 659 aa12.56□□□□□ -0.4
SKA1-203ENST00000417656 CXorf40AQ8TE69 158 aa12.56□□□□□ -0.4
SKA1-203ENST00000417656 IMP4Q96G21 291 aaKnown RBP12.56□□□□□ -0.4
SKA1-203ENST00000417656 SERAC1Q96JX3 654 aa12.56□□□□□ -0.4
SKA1-203ENST00000417656 TEKT5Q96M29 485 aa12.56□□□□□ -0.4
SKA1-203ENST00000417656 RBM15Q96T37 977 aaKnown RBP eCLIP12.56□□□□□ -0.4
SKA1-203ENST00000417656 EDEM2Q9BV94 578 aa12.56□□□□□ -0.4
SKA1-203ENST00000417656 GLOD4Q9HC38 313 aa12.56□□□□□ -0.4
SKA1-203ENST00000417656 CAPN10Q9HC96 672 aa12.56□□□□□ -0.4
SKA1-203ENST00000417656 AASDHPPTQ9NRN7 309 aa12.56□□□□□ -0.4
SKA1-203ENST00000417656 RXFP3Q9NSD7 469 aa12.56□□□□□ -0.4
SKA1-203ENST00000417656 B4GALT6Q9UBX8 382 aa12.56□□□□□ -0.4
SKA1-203ENST00000417656 TPX2Q9ULW0 747 aaKnown RBP12.56□□□□□ -0.4
SKA1-203ENST00000417656 CA5BQ9Y2D0 317 aa12.56□□□□□ -0.4
SKA1-203ENST00000417656 TRPM6Q9BX84 2022 aa12.55□□□□□ -0.4
SKA1-203ENST00000417656 RIF1Q5UIP0 2472 aaKnown RBP12.55□□□□□ -0.4
SKA1-203ENST00000417656 PIEZO1Q92508 2521 aa12.55□□□□□ -0.4
SKA1-203ENST00000417656 TMEM131Q92545 1883 aa12.55□□□□□ -0.4
SKA1-203ENST00000417656 PI4KAP42356 2102 aa12.55□□□□□ -0.4
SKA1-203ENST00000417656 A0A1W2PQ67 120 aa12.55□□□□□ -0.4
SKA1-203ENST00000417656 IGLON5A6NGN9 336 aa12.55□□□□□ -0.4
SKA1-203ENST00000417656 RIOK3O14730 519 aaKnown RBP12.55□□□□□ -0.4
SKA1-203ENST00000417656 KCNN4O15554 427 aa12.55□□□□□ -0.4
SKA1-203ENST00000417656 CEP104O60308 925 aa12.55□□□□□ -0.4
SKA1-203ENST00000417656 FZD6O60353 706 aa12.55□□□□□ -0.4
SKA1-203ENST00000417656 MMP20O60882 483 aa12.55□□□□□ -0.4
SKA1-203ENST00000417656 ATP1A1P05023 1023 aaKnown RBP12.55□□□□□ -0.4
SKA1-203ENST00000417656 PDHA1P08559 390 aa12.55□□□□□ -0.4
SKA1-203ENST00000417656 CTPS1P17812 591 aa12.55□□□□□ -0.4
SKA1-203ENST00000417656 CA4P22748 312 aa12.55□□□□□ -0.4
SKA1-203ENST00000417656 CES1P23141 567 aa12.55□□□□□ -0.4
SKA1-203ENST00000417656 AFF3P51826 1226 aaKnown RBP12.55□□□□□ -0.4
SKA1-203ENST00000417656 IRX4P78413 519 aa12.55□□□□□ -0.4
SKA1-203ENST00000417656 GRIK2Q13002 908 aa12.55□□□□□ -0.4
SKA1-203ENST00000417656 PTPRRQ15256 657 aa12.55□□□□□ -0.4
SKA1-203ENST00000417656 PCSK7Q16549 785 aa12.55□□□□□ -0.4
SKA1-203ENST00000417656 TMEM52BQ4KMG9 183 aa12.55□□□□□ -0.4
SKA1-203ENST00000417656 DPPA4Q7L190 304 aa12.55□□□□□ -0.4
SKA1-203ENST00000417656 GPR161Q8N6U8 529 aaKnown RBP12.55□□□□□ -0.4
SKA1-203ENST00000417656 LPCAT1Q8NF37 534 aa12.55□□□□□ -0.4
SKA1-203ENST00000417656 SPATA22Q8NHS9 363 aa12.55□□□□□ -0.4
SKA1-203ENST00000417656 SLC35B2Q8TB61 432 aa12.55□□□□□ -0.4
SKA1-203ENST00000417656 SPOCK2Q92563 424 aa12.55□□□□□ -0.4
SKA1-203ENST00000417656 FEM1CQ96JP0 617 aa12.55□□□□□ -0.4
SKA1-203ENST00000417656 SMIM14Q96QK8 99 aa12.55□□□□□ -0.4
SKA1-203ENST00000417656 VAT1Q99536 393 aa12.55□□□□□ -0.4
SKA1-203ENST00000417656 NUSAP1Q9BXS6 441 aaKnown RBP12.55□□□□□ -0.4
SKA1-203ENST00000417656 SLC25A51Q9H1U9 297 aa12.55□□□□□ -0.4
SKA1-203ENST00000417656 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.55□□□□□ -0.4
SKA1-203ENST00000417656 RSPH14Q9UHP6 348 aa12.55□□□□□ -0.4
SKA1-203ENST00000417656 SLC6A14Q9UN76 642 aa12.55□□□□□ -0.4
SKA1-203ENST00000417656 DMTF1Q9Y222 760 aa12.55□□□□□ -0.4
SKA1-203ENST00000417656 CHKBQ9Y259 395 aa12.55□□□□□ -0.4
SKA1-203ENST00000417656 COQ6Q9Y2Z9 468 aa12.55□□□□□ -0.4
SKA1-203ENST00000417656 JRKLQ9Y4A0 524 aa12.55□□□□□ -0.4
SKA1-203ENST00000417656 ZNF292O60281 2723 aa12.54□□□□□ -0.4
SKA1-203ENST00000417656 A0A1B0GVT2 93 aa12.54□□□□□ -0.4
SKA1-203ENST00000417656 NPIPB15A6NHN6 443 aaPredicted RBP12.54□□□□□ -0.4
SKA1-203ENST00000417656 A8MX80 341 aa12.54□□□□□ -0.4
SKA1-203ENST00000417656 PRR5-ARHGAP8B1AHC4 643 aa12.54□□□□□ -0.4
SKA1-203ENST00000417656 RAD51BO15315 384 aa12.54□□□□□ -0.4
SKA1-203ENST00000417656 GDF9O60383 454 aa12.54□□□□□ -0.4
SKA1-203ENST00000417656 MT-CYBP00156 380 aaPredicted RBP12.54□□□□□ -0.4
SKA1-203ENST00000417656 FGGP02679 453 aa12.54□□□□□ -0.4
SKA1-203ENST00000417656 WNT1P04628 370 aa12.54□□□□□ -0.4
SKA1-203ENST00000417656 ALPIP09923 528 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms