RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 SGF29Q96ES7 293 aa18.21■□□□□ 0.51
VCP-202ENST00000417448 IFT43Q96FT9 208 aa18.21■□□□□ 0.51
VCP-202ENST00000417448 EIF3CQ99613 913 aaKnown RBP18.21■□□□□ 0.51
VCP-202ENST00000417448 FEM1AQ9BSK4 669 aa18.21■□□□□ 0.51
VCP-202ENST00000417448 MUC3BQ9H195 1237 aa18.21■□□□□ 0.51
VCP-202ENST00000417448 EVA1BQ9NVM1 165 aa18.21■□□□□ 0.51
VCP-202ENST00000417448 UVRAGQ9P2Y5 699 aa18.21■□□□□ 0.51
VCP-202ENST00000417448 KLF15Q9UIH9 416 aa18.21■□□□□ 0.51
VCP-202ENST00000417448 TEP1Q99973 2627 aaKnown RBP18.21■□□□□ 0.51
VCP-202ENST00000417448 EME2A4GXA9 379 aaPredicted RBP18.2■□□□□ 0.5
VCP-202ENST00000417448 RNF103O00237 685 aa18.2■□□□□ 0.5
VCP-202ENST00000417448 TCEA3O75764 348 aa18.2■□□□□ 0.5
VCP-202ENST00000417448 PROSCO94903 275 aa18.2■□□□□ 0.5
VCP-202ENST00000417448 CTSLP07711 333 aa18.2■□□□□ 0.5
VCP-202ENST00000417448 RARAP10276 462 aa18.2■□□□□ 0.5
VCP-202ENST00000417448 HNRNPA2B1P22626 353 aaKnown RBP18.2■□□□□ 0.5
VCP-202ENST00000417448 OR1E1P30953 314 aa18.2■□□□□ 0.5
VCP-202ENST00000417448 L1CAMP32004 1257 aa18.2■□□□□ 0.5
VCP-202ENST00000417448 NNMTP40261 264 aa18.2■□□□□ 0.5
VCP-202ENST00000417448 NOP2P46087 812 aaKnown RBP18.2■□□□□ 0.5
VCP-202ENST00000417448 HNRNPKP61978 463 aaKnown RBP eCLIP18.2■□□□□ 0.5
VCP-202ENST00000417448 MTA1Q13330 715 aa18.2■□□□□ 0.5
VCP-202ENST00000417448 FZD2Q14332 565 aa18.2■□□□□ 0.5
VCP-202ENST00000417448 SPA17Q15506 151 aa18.2■□□□□ 0.5
VCP-202ENST00000417448 Q6ZSR6 202 aa18.2■□□□□ 0.5
VCP-202ENST00000417448 Q6ZVU0 165 aa18.2■□□□□ 0.5
VCP-202ENST00000417448 DSG4Q86SJ6 1040 aa18.2■□□□□ 0.5
VCP-202ENST00000417448 PSMB7Q99436 277 aa18.2■□□□□ 0.5
VCP-202ENST00000417448 SEMA3CQ99985 751 aa18.2■□□□□ 0.5
VCP-202ENST00000417448 SPON2Q9BUD6 331 aa18.2■□□□□ 0.5
VCP-202ENST00000417448 GOLPH3Q9H4A6 298 aa18.2■□□□□ 0.5
VCP-202ENST00000417448 PPARGC1AQ9UBK2 798 aaKnown RBP18.2■□□□□ 0.5
VCP-202ENST00000417448 SALL4Q9UJQ4 1053 aa18.2■□□□□ 0.5
VCP-202ENST00000417448 VPS28Q9UK41 221 aa18.2■□□□□ 0.5
VCP-202ENST00000417448 ZFR2Q9UPR6 939 aaKnown RBP18.2■□□□□ 0.5
VCP-202ENST00000417448 TBC1D30Q9Y2I9 924 aa18.2■□□□□ 0.5
VCP-202ENST00000417448 OR51B4Q9Y5P0 310 aa18.2■□□□□ 0.5
VCP-202ENST00000417448 ACTL7AQ9Y615 435 aa18.2■□□□□ 0.5
VCP-202ENST00000417448 DUSP10Q9Y6W6 482 aa18.2■□□□□ 0.5
VCP-202ENST00000417448 CCDC187A0A096LP49 1063 aa18.19■□□□□ 0.5
VCP-202ENST00000417448 C1QTNF3-AMACRE9PGA6 284 aa18.19■□□□□ 0.5
VCP-202ENST00000417448 MCF2LO15068 1137 aa18.19■□□□□ 0.5
VCP-202ENST00000417448 CSF2P04141 144 aa18.19■□□□□ 0.5
VCP-202ENST00000417448 TNNT1P13805 278 aa18.19■□□□□ 0.5
VCP-202ENST00000417448 NME1P15531 152 aaKnown RBP18.19■□□□□ 0.5
VCP-202ENST00000417448 EPHB2P29323 1055 aa18.19■□□□□ 0.5
VCP-202ENST00000417448 SLC5A2P31639 672 aa18.19■□□□□ 0.5
VCP-202ENST00000417448 AKT2P31751 481 aa18.19■□□□□ 0.5
VCP-202ENST00000417448 ACVRL1P37023 503 aa18.19■□□□□ 0.5
VCP-202ENST00000417448 NRG1Q02297 640 aaPredicted RBP18.19■□□□□ 0.5
VCP-202ENST00000417448 SLC25A11Q02978 314 aaKnown RBP18.19■□□□□ 0.5
VCP-202ENST00000417448 SEL1L3Q68CR1 1132 aa18.19■□□□□ 0.5
VCP-202ENST00000417448 LINGO4Q6UY18 593 aa18.19■□□□□ 0.5
VCP-202ENST00000417448 LEKR1Q6ZMV7 388 aa18.19■□□□□ 0.5
VCP-202ENST00000417448 NLRP14Q86W24 1093 aa18.19■□□□□ 0.5
VCP-202ENST00000417448 HORMAD1Q86X24 394 aa18.19■□□□□ 0.5
VCP-202ENST00000417448 NIPA2Q8N8Q9 360 aa18.19■□□□□ 0.5
VCP-202ENST00000417448 BMFQ96LC9 184 aa18.19■□□□□ 0.5
VCP-202ENST00000417448 TMEM51Q9NW97 253 aa18.19■□□□□ 0.5
VCP-202ENST00000417448 MFHAS1Q9Y4C4 1052 aa18.19■□□□□ 0.5
VCP-202ENST00000417448 EEF2KO00418 725 aaKnown RBP18.18■□□□□ 0.5
VCP-202ENST00000417448 BUB1O43683 1085 aa18.18■□□□□ 0.5
VCP-202ENST00000417448 ATP9BO43861 1147 aa18.18■□□□□ 0.5
VCP-202ENST00000417448 MT-CO1P00395 513 aa18.18■□□□□ 0.5
VCP-202ENST00000417448 RHOQP17081 205 aa18.18■□□□□ 0.5
VCP-202ENST00000417448 PCK1P35558 622 aa18.18■□□□□ 0.5
VCP-202ENST00000417448 TPI1P60174 286 aa18.18■□□□□ 0.5
VCP-202ENST00000417448 SULT2A1Q06520 285 aa18.18■□□□□ 0.5
VCP-202ENST00000417448 DEFB133Q30KQ1 61 aa18.18■□□□□ 0.5
VCP-202ENST00000417448 ACCSLQ4AC99 568 aa18.18■□□□□ 0.5
VCP-202ENST00000417448 TPRG1LQ5T0D9 272 aa18.18■□□□□ 0.5
VCP-202ENST00000417448 NEK5Q6P3R8 708 aa18.18■□□□□ 0.5
VCP-202ENST00000417448 PTAR1Q7Z6K3 402 aaPredicted RBP18.18■□□□□ 0.5
VCP-202ENST00000417448 TPCN2Q8NHX9 752 aa18.18■□□□□ 0.5
VCP-202ENST00000417448 EPAS1Q99814 870 aa18.18■□□□□ 0.5
VCP-202ENST00000417448 LACRTQ9GZZ8 138 aa18.18■□□□□ 0.5
VCP-202ENST00000417448 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.18■□□□□ 0.5
VCP-202ENST00000417448 CWC15Q9P013 229 aaKnown RBP18.18■□□□□ 0.5
VCP-202ENST00000417448 INTUQ9ULD6 942 aa18.18■□□□□ 0.5
VCP-202ENST00000417448 ZFC3H1O60293 1989 aaKnown RBP18.18■□□□□ 0.5
VCP-202ENST00000417448 CLEC18AA5D8T8 446 aa18.17■□□□□ 0.5
VCP-202ENST00000417448 POM121BA6NF01 834 aa18.17■□□□□ 0.5
VCP-202ENST00000417448 A6NNZ2 444 aa18.17■□□□□ 0.5
VCP-202ENST00000417448 GOLGA6L6A8MZA4 724 aa18.17■□□□□ 0.5
VCP-202ENST00000417448 K7ERQ8 282 aa18.17■□□□□ 0.5
VCP-202ENST00000417448 MUSKO15146 869 aa18.17■□□□□ 0.5
VCP-202ENST00000417448 ALOX15BO15296 676 aa18.17■□□□□ 0.5
VCP-202ENST00000417448 CD48P09326 243 aa18.17■□□□□ 0.5
VCP-202ENST00000417448 CR2P20023 1033 aa18.17■□□□□ 0.5
VCP-202ENST00000417448 AMPD1P23109 780 aa18.17■□□□□ 0.5
VCP-202ENST00000417448 VASPP50552 380 aaPredicted RBP18.17■□□□□ 0.5
VCP-202ENST00000417448 PLK1P53350 603 aa18.17■□□□□ 0.5
VCP-202ENST00000417448 GNA12Q03113 381 aa18.17■□□□□ 0.5
VCP-202ENST00000417448 MMRN1Q13201 1228 aa18.17■□□□□ 0.5
VCP-202ENST00000417448 SLC12A1Q13621 1099 aa18.17■□□□□ 0.5
VCP-202ENST00000417448 DLG2Q15700 870 aa18.17■□□□□ 0.5
VCP-202ENST00000417448 TBR1Q16650 682 aa18.17■□□□□ 0.5
VCP-202ENST00000417448 TMEM259Q4ZIN3 620 aa18.17■□□□□ 0.5
VCP-202ENST00000417448 CLEC18BQ6UXF7 455 aa18.17■□□□□ 0.5
VCP-202ENST00000417448 B3GNT8Q7Z7M8 397 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms