RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 CCNJLQ8IV13 435 aa15.53■□□□□ 0.08
DDX56-202ENST00000415758 EPS8L1Q8TE68 723 aa15.53■□□□□ 0.08
DDX56-202ENST00000415758 NTAN1Q96AB6 310 aa15.53■□□□□ 0.08
DDX56-202ENST00000415758 HMCESQ96FZ2 354 aa15.53■□□□□ 0.08
DDX56-202ENST00000415758 PISDQ9UG56 409 aa15.53■□□□□ 0.08
DDX56-202ENST00000415758 COQ6Q9Y2Z9 468 aa15.53■□□□□ 0.08
DDX56-202ENST00000415758 LOXL2Q9Y4K0 774 aa15.53■□□□□ 0.08
DDX56-202ENST00000415758 FHOD1Q9Y613 1164 aa15.53■□□□□ 0.08
DDX56-202ENST00000415758 A0A1W2PQC6 194 aa15.52■□□□□ 0.08
DDX56-202ENST00000415758 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.52■□□□□ 0.08
DDX56-202ENST00000415758 TNFP01375 233 aa15.52■□□□□ 0.08
DDX56-202ENST00000415758 CYP1A1P04798 512 aaPredicted RBP15.52■□□□□ 0.08
DDX56-202ENST00000415758 UCHL3P15374 230 aa15.52■□□□□ 0.08
DDX56-202ENST00000415758 MMP8P22894 467 aa15.52■□□□□ 0.08
DDX56-202ENST00000415758 HDAC4P56524 1084 aa15.52■□□□□ 0.08
DDX56-202ENST00000415758 YBEYP58557 167 aaPredicted RBP15.52■□□□□ 0.08
DDX56-202ENST00000415758 RHOAP61586 193 aa15.52■□□□□ 0.08
DDX56-202ENST00000415758 MTM1Q13496 603 aa15.52■□□□□ 0.08
DDX56-202ENST00000415758 GRM3Q14832 879 aa15.52■□□□□ 0.08
DDX56-202ENST00000415758 CDO1Q16878 200 aa15.52■□□□□ 0.08
DDX56-202ENST00000415758 CERCAMQ5T4B2 595 aa15.52■□□□□ 0.08
DDX56-202ENST00000415758 RD3Q7Z3Z2 195 aa15.52■□□□□ 0.08
DDX56-202ENST00000415758 ZNF677Q86XU0 584 aa15.52■□□□□ 0.08
DDX56-202ENST00000415758 RTL3Q8N8U3 475 aaKnown RBP15.52■□□□□ 0.08
DDX56-202ENST00000415758 MLKLQ8NB16 471 aa15.52■□□□□ 0.08
DDX56-202ENST00000415758 GPT2Q8TD30 523 aa15.52■□□□□ 0.08
DDX56-202ENST00000415758 WDR92Q96MX6 357 aa15.52■□□□□ 0.08
DDX56-202ENST00000415758 CMKLR1Q99788 373 aa15.52■□□□□ 0.08
DDX56-202ENST00000415758 TUBGCP2Q9BSJ2 902 aa15.52■□□□□ 0.08
DDX56-202ENST00000415758 STK33Q9BYT3 514 aa15.52■□□□□ 0.08
DDX56-202ENST00000415758 KLC2Q9H0B6 622 aa15.52■□□□□ 0.08
DDX56-202ENST00000415758 SUV39H2Q9H5I1 410 aa15.52■□□□□ 0.08
DDX56-202ENST00000415758 KLQ9UEF7 1012 aa15.52■□□□□ 0.08
DDX56-202ENST00000415758 OR1A2Q9Y585 309 aa15.52■□□□□ 0.08
DDX56-202ENST00000415758 PCDHGA4Q9Y5G9 962 aa15.52■□□□□ 0.08
DDX56-202ENST00000415758 COL12A1Q99715 3063 aa15.51■□□□□ 0.07
DDX56-202ENST00000415758 PRAMEF33A0A0G2JMD5 474 aa15.51■□□□□ 0.07
DDX56-202ENST00000415758 FAM170AA1A519 330 aa15.51■□□□□ 0.07
DDX56-202ENST00000415758 CFAP69A5D8W1 941 aa15.51■□□□□ 0.07
DDX56-202ENST00000415758 INSIG1O15503 277 aa15.51■□□□□ 0.07
DDX56-202ENST00000415758 PRAMEF10O60809 474 aa15.51■□□□□ 0.07
DDX56-202ENST00000415758 FAM87AP0C7U9 286 aa15.51■□□□□ 0.07
DDX56-202ENST00000415758 ITIH1P19827 911 aa15.51■□□□□ 0.07
DDX56-202ENST00000415758 XPAP23025 273 aaPredicted RBP15.51■□□□□ 0.07
DDX56-202ENST00000415758 CD82P27701 267 aa15.51■□□□□ 0.07
DDX56-202ENST00000415758 SRSF1Q07955 248 aaKnown RBP eCLIP15.51■□□□□ 0.074e-7■□□□□ 8.4
DDX56-202ENST00000415758 SERINC3Q13530 473 aa15.51■□□□□ 0.07
DDX56-202ENST00000415758 CYTH1Q15438 398 aa15.51■□□□□ 0.07
DDX56-202ENST00000415758 TBR1Q16650 682 aa15.51■□□□□ 0.07
DDX56-202ENST00000415758 MANEAQ5SRI9 462 aa15.51■□□□□ 0.07
DDX56-202ENST00000415758 KCTD16Q68DU8 428 aa15.51■□□□□ 0.07
DDX56-202ENST00000415758 BRAT1Q6PJG6 821 aa15.51■□□□□ 0.07
DDX56-202ENST00000415758 NYAP1Q6ZVC0 841 aa15.51■□□□□ 0.07
DDX56-202ENST00000415758 SPRED1Q7Z699 444 aa15.51■□□□□ 0.07
DDX56-202ENST00000415758 DNAAF5Q86Y56 855 aa15.51■□□□□ 0.07
DDX56-202ENST00000415758 SLITRK4Q8IW52 837 aa15.51■□□□□ 0.07
DDX56-202ENST00000415758 FAM114A1Q8IWE2 563 aa15.51■□□□□ 0.07
DDX56-202ENST00000415758 CCDC185Q8N715 623 aa15.51■□□□□ 0.07
DDX56-202ENST00000415758 ZSCAN1Q8NBB4 408 aa15.51■□□□□ 0.07
DDX56-202ENST00000415758 JOSD2Q8TAC2 188 aa15.51■□□□□ 0.07
DDX56-202ENST00000415758 PDXPQ96GD0 296 aa15.51■□□□□ 0.07
DDX56-202ENST00000415758 ZNF641Q96N77 438 aaPredicted RBP15.51■□□□□ 0.07
DDX56-202ENST00000415758 TRIM4Q9C037 500 aa15.51■□□□□ 0.07
DDX56-202ENST00000415758 PCDH12Q9NPG4 1184 aa15.51■□□□□ 0.07
DDX56-202ENST00000415758 WDR70Q9NW82 654 aa15.51■□□□□ 0.07
DDX56-202ENST00000415758 LHX3Q9UBR4 397 aa15.51■□□□□ 0.07
DDX56-202ENST00000415758 DAAM1Q9Y4D1 1078 aa15.51■□□□□ 0.07
DDX56-202ENST00000415758 PCDHB11Q9Y5F2 797 aa15.51■□□□□ 0.07
DDX56-202ENST00000415758 ARHGEF17Q96PE2 2063 aaPredicted RBP15.51■□□□□ 0.07
DDX56-202ENST00000415758 WASH4PA8MWX3 477 aa15.5■□□□□ 0.07
DDX56-202ENST00000415758 C9orf172C9J069 976 aa15.5■□□□□ 0.07
DDX56-202ENST00000415758 F8VZ95 297 aa15.5■□□□□ 0.07
DDX56-202ENST00000415758 TNFRSF10CO14798 259 aa15.5■□□□□ 0.07
DDX56-202ENST00000415758 NUDT21O43809 227 aaKnown RBP15.5■□□□□ 0.07
DDX56-202ENST00000415758 PIGNO95427 931 aa15.5■□□□□ 0.07
DDX56-202ENST00000415758 HOXC4P09017 264 aaPredicted RBP15.5■□□□□ 0.07
DDX56-202ENST00000415758 MMP12P39900 470 aa15.5■□□□□ 0.07
DDX56-202ENST00000415758 ETV5P41161 510 aa15.5■□□□□ 0.07
DDX56-202ENST00000415758 LIG3P49916 1009 aa15.5■□□□□ 0.07
DDX56-202ENST00000415758 KIAA1024LP59773 190 aa15.5■□□□□ 0.07
DDX56-202ENST00000415758 HLTFQ14527 1009 aaKnown RBP eCLIP15.5■□□□□ 0.07
DDX56-202ENST00000415758 TCEA2Q15560 299 aa15.5■□□□□ 0.07
DDX56-202ENST00000415758 PARP15Q460N3 678 aa15.5■□□□□ 0.07
DDX56-202ENST00000415758 C14orf28Q4W4Y0 310 aa15.5■□□□□ 0.07
DDX56-202ENST00000415758 ERAP2Q6P179 960 aa15.5■□□□□ 0.07
DDX56-202ENST00000415758 ZFAND4Q86XD8 727 aa15.5■□□□□ 0.07
DDX56-202ENST00000415758 UMODL1-AS1Q8N2C9 162 aa15.5■□□□□ 0.07
DDX56-202ENST00000415758 Q8N9G6 341 aaPredicted RBP15.5■□□□□ 0.07
DDX56-202ENST00000415758 OR56A4Q8NGH8 313 aa15.5■□□□□ 0.07
DDX56-202ENST00000415758 USP7Q93009 1102 aa15.5■□□□□ 0.07
DDX56-202ENST00000415758 FOXJ2Q9P0K8 574 aa15.5■□□□□ 0.07
DDX56-202ENST00000415758 LRIT1Q9P2V4 623 aa15.5■□□□□ 0.07
DDX56-202ENST00000415758 NOCTQ9UK39 431 aaKnown RBP15.5■□□□□ 0.07
DDX56-202ENST00000415758 RNF215Q9Y6U7 377 aa15.5■□□□□ 0.07
DDX56-202ENST00000415758 ANKRD36A6QL64 1941 aa15.49■□□□□ 0.07
DDX56-202ENST00000415758 TMEM202A6NGA9 273 aa15.49■□□□□ 0.07
DDX56-202ENST00000415758 RASA4BC9J798 803 aa15.49■□□□□ 0.07
DDX56-202ENST00000415758 RASA4O43374 803 aa15.49■□□□□ 0.07
DDX56-202ENST00000415758 WT1P19544 449 aaPredicted RBP15.49■□□□□ 0.07
DDX56-202ENST00000415758 EPHB2P29323 1055 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms