RNA–Protein interactions for RNA: ENST00000415691.2

HNF4A-204, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 2,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-204ENST00000415691 TRIM64BA6NI03 449 aa13.35□□□□□ -0.27
HNF4A-204ENST00000415691 ZNF195O14628 629 aa13.35□□□□□ -0.27
HNF4A-204ENST00000415691 GRAP2O75791 330 aa13.35□□□□□ -0.27
HNF4A-204ENST00000415691 GSRP00390 522 aa13.35□□□□□ -0.27
HNF4A-204ENST00000415691 CALB1P05937 261 aa13.35□□□□□ -0.27
HNF4A-204ENST00000415691 USP17L7P0C7H9 530 aa13.35□□□□□ -0.27
HNF4A-204ENST00000415691 GSTT2P0CG29 244 aa13.35□□□□□ -0.27
HNF4A-204ENST00000415691 GSTT2BP0CG30 244 aa13.35□□□□□ -0.27
HNF4A-204ENST00000415691 TCF4P15884 667 aa13.35□□□□□ -0.27
HNF4A-204ENST00000415691 ATF6P18850 670 aa13.35□□□□□ -0.27
HNF4A-204ENST00000415691 CDH3P22223 829 aa13.35□□□□□ -0.27
HNF4A-204ENST00000415691 CNTFP26441 200 aa13.35□□□□□ -0.27
HNF4A-204ENST00000415691 MAGEA11P43364 429 aa13.35□□□□□ -0.27
HNF4A-204ENST00000415691 C21orf59P57076 290 aa13.35□□□□□ -0.27
HNF4A-204ENST00000415691 RPS3AP61247 264 aaKnown RBP13.35□□□□□ -0.27
HNF4A-204ENST00000415691 ZNF252P-AS1Q0IIN9 211 aa13.35□□□□□ -0.27
HNF4A-204ENST00000415691 DPYSL3Q14195 570 aa13.35□□□□□ -0.27
HNF4A-204ENST00000415691 LRIT3Q3SXY7 679 aa13.35□□□□□ -0.27
HNF4A-204ENST00000415691 KCTD21Q4G0X4 260 aa13.35□□□□□ -0.27
HNF4A-204ENST00000415691 RAB41Q5JT25 222 aa13.35□□□□□ -0.27
HNF4A-204ENST00000415691 GPR141Q7Z602 305 aa13.35□□□□□ -0.27
HNF4A-204ENST00000415691 NDUFAF2Q8N183 169 aa13.35□□□□□ -0.27
HNF4A-204ENST00000415691 CENPSQ8N2Z9 138 aa13.35□□□□□ -0.27
HNF4A-204ENST00000415691 C2orf15Q8WU43 125 aaKnown RBP13.35□□□□□ -0.27
HNF4A-204ENST00000415691 HSPH1Q92598 858 aa13.35□□□□□ -0.27
HNF4A-204ENST00000415691 RMND5BQ96G75 393 aaPredicted RBP13.35□□□□□ -0.27
HNF4A-204ENST00000415691 C8orf48Q96LL4 319 aa13.35□□□□□ -0.27
HNF4A-204ENST00000415691 UNKQ9C0B0 810 aaKnown RBP13.35□□□□□ -0.27
HNF4A-204ENST00000415691 EPS15L1Q9UBC2 864 aa13.35□□□□□ -0.27
HNF4A-204ENST00000415691 B3GNT3Q9Y2A9 372 aa13.35□□□□□ -0.27
HNF4A-204ENST00000415691 SZT2Q5T011 3432 aa13.35□□□□□ -0.27
HNF4A-204ENST00000415691 SOX1O00570 391 aaPredicted RBP13.35□□□□□ -0.27
HNF4A-204ENST00000415691 SLC22A2O15244 555 aa13.35□□□□□ -0.27
HNF4A-204ENST00000415691 FUCA1P04066 466 aa13.35□□□□□ -0.27
HNF4A-204ENST00000415691 ADH1AP07327 375 aa13.35□□□□□ -0.27
HNF4A-204ENST00000415691 FGF3P11487 239 aaPredicted RBP13.35□□□□□ -0.27
HNF4A-204ENST00000415691 PGFP49763 221 aa13.35□□□□□ -0.27
HNF4A-204ENST00000415691 CLCN4P51793 760 aa13.35□□□□□ -0.27
HNF4A-204ENST00000415691 SLC5A3P53794 718 aa13.35□□□□□ -0.27
HNF4A-204ENST00000415691 RPL7AP62424 266 aaKnown RBP13.35□□□□□ -0.27
HNF4A-204ENST00000415691 MRPS22P82650 360 aaKnown RBP13.35□□□□□ -0.27
HNF4A-204ENST00000415691 CREMQ03060 361 aa13.35□□□□□ -0.27
HNF4A-204ENST00000415691 PIGGQ5H8A4 983 aa13.35□□□□□ -0.27
HNF4A-204ENST00000415691 DEPDC1Q5TB30 811 aa13.35□□□□□ -0.27
HNF4A-204ENST00000415691 FAXCQ5TGI0 409 aa13.35□□□□□ -0.27
HNF4A-204ENST00000415691 THOC7Q6I9Y2 204 aaKnown RBP13.35□□□□□ -0.27
HNF4A-204ENST00000415691 CTAGE3PQ8IX95 158 aa13.35□□□□□ -0.27
HNF4A-204ENST00000415691 KHSRPQ92945 711 aaKnown RBP eCLIP13.35□□□□□ -0.277e-7■■■□□ 18.1
HNF4A-204ENST00000415691 LRRC39Q96DD0 335 aa13.35□□□□□ -0.27
HNF4A-204ENST00000415691 TDRD1Q9BXT4 1180 aaKnown RBP13.35□□□□□ -0.27
HNF4A-204ENST00000415691 ULBP1Q9BZM6 244 aa13.35□□□□□ -0.27
HNF4A-204ENST00000415691 COPS7BQ9H9Q2 264 aaPredicted RBP13.35□□□□□ -0.27
HNF4A-204ENST00000415691 CLK4Q9HAZ1 481 aaKnown RBP13.35□□□□□ -0.27
HNF4A-204ENST00000415691 PRRG1O14668 218 aa13.34□□□□□ -0.27
HNF4A-204ENST00000415691 BCAS2O75934 225 aaPredicted RBP13.34□□□□□ -0.27
HNF4A-204ENST00000415691 BASP1P80723 227 aaKnown RBP13.34□□□□□ -0.27
HNF4A-204ENST00000415691 KLF10Q13118 480 aa13.34□□□□□ -0.27
HNF4A-204ENST00000415691 ACAP1Q15027 740 aa13.34□□□□□ -0.27
HNF4A-204ENST00000415691 ANKDD1AQ495B1 522 aa13.34□□□□□ -0.27
HNF4A-204ENST00000415691 NEPROQ6NW34 567 aa13.34□□□□□ -0.27
HNF4A-204ENST00000415691 C16orf46Q6P387 395 aa13.34□□□□□ -0.27
HNF4A-204ENST00000415691 ISLR2Q6UXK2 745 aa13.34□□□□□ -0.27
HNF4A-204ENST00000415691 JOSD2Q8TAC2 188 aa13.34□□□□□ -0.27
HNF4A-204ENST00000415691 MCRS1Q96EZ8 462 aa13.34□□□□□ -0.27
HNF4A-204ENST00000415691 CNDP1Q96KN2 507 aa13.34□□□□□ -0.27
HNF4A-204ENST00000415691 PKP2Q99959 881 aa13.34□□□□□ -0.27
HNF4A-204ENST00000415691 TTYH1Q9H313 450 aaPredicted RBP13.34□□□□□ -0.27
HNF4A-204ENST00000415691 TRPC7Q9HCX4 862 aa13.34□□□□□ -0.27
HNF4A-204ENST00000415691 OLAHQ9NV23 265 aa13.34□□□□□ -0.27
HNF4A-204ENST00000415691 HEMK1Q9Y5R4 338 aaPredicted RBP13.34□□□□□ -0.27
HNF4A-204ENST00000415691 A0A087WXM4 84 aa13.34□□□□□ -0.27
HNF4A-204ENST00000415691 EPCAMP16422 314 aa13.34□□□□□ -0.27
HNF4A-204ENST00000415691 ACADSBP45954 432 aa13.34□□□□□ -0.27
HNF4A-204ENST00000415691 TUFMP49411 452 aaKnown RBP13.34□□□□□ -0.27
HNF4A-204ENST00000415691 HARS2P49590 506 aaKnown RBP13.34□□□□□ -0.27
HNF4A-204ENST00000415691 NDST2P52849 883 aa13.34□□□□□ -0.27
HNF4A-204ENST00000415691 PDK1Q15118 436 aa13.34□□□□□ -0.27
HNF4A-204ENST00000415691 CYTH1Q15438 398 aa13.34□□□□□ -0.27
HNF4A-204ENST00000415691 MOGQ16653 247 aa13.34□□□□□ -0.27
HNF4A-204ENST00000415691 ZNF362Q5T0B9 420 aaPredicted RBP13.34□□□□□ -0.27
HNF4A-204ENST00000415691 DNAJC14Q6Y2X3 702 aaPredicted RBP13.34□□□□□ -0.27
HNF4A-204ENST00000415691 BNC2Q6ZN30 1099 aaPredicted RBP13.34□□□□□ -0.27
HNF4A-204ENST00000415691 ZCCHC23Q6ZST2 131 aa13.34□□□□□ -0.27
HNF4A-204ENST00000415691 HFE2Q6ZVN8 426 aa13.34□□□□□ -0.27
HNF4A-204ENST00000415691 TCEAL8Q8IYN2 117 aa13.34□□□□□ -0.27
HNF4A-204ENST00000415691 EMC1Q8N766 993 aa13.34□□□□□ -0.27
HNF4A-204ENST00000415691 KREMEN2Q8NCW0 462 aa13.34□□□□□ -0.27
HNF4A-204ENST00000415691 EFHD2Q96C19 240 aaPredicted RBP13.34□□□□□ -0.27
HNF4A-204ENST00000415691 C12orf43Q96C57 262 aaKnown RBP13.34□□□□□ -0.27
HNF4A-204ENST00000415691 OLFM1Q99784 485 aa13.34□□□□□ -0.27
HNF4A-204ENST00000415691 PAIP1Q9H074 479 aaKnown RBP13.34□□□□□ -0.27
HNF4A-204ENST00000415691 YIPF1Q9Y548 306 aa13.34□□□□□ -0.27
HNF4A-204ENST00000415691 SULT1C4O75897 302 aa13.33□□□□□ -0.28
HNF4A-204ENST00000415691 RFC1P35251 1148 aaPredicted RBP13.33□□□□□ -0.28
HNF4A-204ENST00000415691 SLC6A3Q01959 620 aa13.33□□□□□ -0.28
HNF4A-204ENST00000415691 TWF1Q12792 350 aa13.33□□□□□ -0.28
HNF4A-204ENST00000415691 FAM102AQ5T9C2 384 aaPredicted RBP13.33□□□□□ -0.28
HNF4A-204ENST00000415691 ITPRIPL1Q6GPH6 555 aa13.33□□□□□ -0.28
HNF4A-204ENST00000415691 DNAJC24Q6P3W2 148 aa13.33□□□□□ -0.28
HNF4A-204ENST00000415691 BHLHA9Q7RTU4 235 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms