RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 SNUPNO95149 360 aaKnown RBP11.68□□□□□ -0.54
RFFL-205ENST00000415395 SERPINE1P05121 402 aa11.68□□□□□ -0.54
RFFL-205ENST00000415395 PRDX6P30041 224 aa11.68□□□□□ -0.54
RFFL-205ENST00000415395 COPAP53621 1224 aa11.68□□□□□ -0.54
RFFL-205ENST00000415395 GNA12Q03113 381 aa11.68□□□□□ -0.54
RFFL-205ENST00000415395 MARC1Q5VT66 337 aa11.68□□□□□ -0.54
RFFL-205ENST00000415395 STEAP4Q687X5 459 aa11.68□□□□□ -0.54
RFFL-205ENST00000415395 FAM109BQ6ICB4 259 aaPredicted RBP11.68□□□□□ -0.54
RFFL-205ENST00000415395 OR52E8Q6IFG1 317 aa11.68□□□□□ -0.54
RFFL-205ENST00000415395 TTC7BQ86TV6 843 aa11.68□□□□□ -0.54
RFFL-205ENST00000415395 NRG4Q8WWG1 115 aa11.68□□□□□ -0.54
RFFL-205ENST00000415395 GATA6Q92908 595 aa11.68□□□□□ -0.54
RFFL-205ENST00000415395 MYEOVQ96EZ4 313 aa11.68□□□□□ -0.54
RFFL-205ENST00000415395 CYP2S1Q96SQ9 504 aa11.68□□□□□ -0.54
RFFL-205ENST00000415395 ECSITQ9BQ95 431 aa11.68□□□□□ -0.54
RFFL-205ENST00000415395 GORASP1Q9BQQ3 440 aa11.68□□□□□ -0.54
RFFL-205ENST00000415395 VCX3AQ9NNX9 186 aa11.68□□□□□ -0.54
RFFL-205ENST00000415395 CASS4Q9NQ75 786 aa11.68□□□□□ -0.54
RFFL-205ENST00000415395 RBM22Q9NW64 420 aaKnown RBP eCLIP11.68□□□□□ -0.542e-7■■■■□ 22.2
RFFL-205ENST00000415395 SMPD4Q9NXE4 827 aa11.68□□□□□ -0.54
RFFL-205ENST00000415395 BCAP29Q9UHQ4 241 aa11.68□□□□□ -0.54
RFFL-205ENST00000415395 MID2Q9UJV3 735 aa11.68□□□□□ -0.54
RFFL-205ENST00000415395 SH3BP1Q9Y3L3 701 aa11.68□□□□□ -0.54
RFFL-205ENST00000415395 NOTCH4Q99466 2003 aa11.67□□□□□ -0.54
RFFL-205ENST00000415395 MIA3Q5JRA6 1907 aa11.67□□□□□ -0.54
RFFL-205ENST00000415395 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.67□□□□□ -0.54
RFFL-205ENST00000415395 CCDC195A0A1B0GUA6 201 aa11.67□□□□□ -0.54
RFFL-205ENST00000415395 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.67□□□□□ -0.54
RFFL-205ENST00000415395 ZNF197O14709 1029 aa11.67□□□□□ -0.54
RFFL-205ENST00000415395 AVILO75366 819 aa11.67□□□□□ -0.54
RFFL-205ENST00000415395 HLA-DQB2P05538 268 aa11.67□□□□□ -0.54
RFFL-205ENST00000415395 CPA2P48052 419 aa11.67□□□□□ -0.54
RFFL-205ENST00000415395 MTM1Q13496 603 aa11.67□□□□□ -0.54
RFFL-205ENST00000415395 RFTN1Q14699 578 aaPredicted RBP11.67□□□□□ -0.54
RFFL-205ENST00000415395 FASTKD1Q53R41 847 aaKnown RBP11.67□□□□□ -0.54
RFFL-205ENST00000415395 MPP7Q5T2T1 576 aa11.67□□□□□ -0.54
RFFL-205ENST00000415395 SYCP2LQ5T4T6 812 aa11.67□□□□□ -0.54
RFFL-205ENST00000415395 IZUMO2Q6UXV1 221 aa11.67□□□□□ -0.54
RFFL-205ENST00000415395 CDHR3Q6ZTQ4 885 aa11.67□□□□□ -0.54
RFFL-205ENST00000415395 SDCCAG8Q86SQ7 713 aaPredicted RBP11.67□□□□□ -0.54
RFFL-205ENST00000415395 CIR1Q86X95 450 aaPredicted RBP11.67□□□□□ -0.54
RFFL-205ENST00000415395 CCDC117Q8IWD4 279 aaPredicted RBP11.67□□□□□ -0.54
RFFL-205ENST00000415395 BBS5Q8N3I7 341 aa11.67□□□□□ -0.54
RFFL-205ENST00000415395 SHKBP1Q8TBC3 707 aa11.67□□□□□ -0.54
RFFL-205ENST00000415395 PRR11Q96HE9 360 aaPredicted RBP11.67□□□□□ -0.54
RFFL-205ENST00000415395 MLPHQ9BV36 600 aaPredicted RBP11.67□□□□□ -0.54
RFFL-205ENST00000415395 PRKD2Q9BZL6 878 aa11.67□□□□□ -0.54
RFFL-205ENST00000415395 SLC25A51Q9H1U9 297 aa11.67□□□□□ -0.54
RFFL-205ENST00000415395 TASP1Q9H6P5 420 aa11.67□□□□□ -0.54
RFFL-205ENST00000415395 VPS45Q9NRW7 570 aa11.67□□□□□ -0.54
RFFL-205ENST00000415395 MSRAQ9UJ68 235 aa11.67□□□□□ -0.54
RFFL-205ENST00000415395 YBX2Q9Y2T7 364 aaKnown RBP11.67□□□□□ -0.54
RFFL-205ENST00000415395 NUP210Q8TEM1 1887 aaPredicted RBP11.67□□□□□ -0.54
RFFL-205ENST00000415395 E2F8A0AVK6 867 aa11.66□□□□□ -0.54
RFFL-205ENST00000415395 CXorf49A8MYA2 514 aaPredicted RBP11.66□□□□□ -0.54
RFFL-205ENST00000415395 CCNT2O60583 730 aaKnown RBP11.66□□□□□ -0.54
RFFL-205ENST00000415395 ALDH1A2O94788 518 aa11.66□□□□□ -0.54
RFFL-205ENST00000415395 RHOP08100 348 aa11.66□□□□□ -0.54
RFFL-205ENST00000415395 RHOCP08134 193 aa11.66□□□□□ -0.54
RFFL-205ENST00000415395 TCF3P15923 654 aa11.66□□□□□ -0.54
RFFL-205ENST00000415395 EPCAMP16422 314 aa11.66□□□□□ -0.54
RFFL-205ENST00000415395 PGAM1P18669 254 aa11.66□□□□□ -0.54
RFFL-205ENST00000415395 SLC1A6P48664 564 aa11.66□□□□□ -0.54
RFFL-205ENST00000415395 NPY2RP49146 381 aa11.66□□□□□ -0.54
RFFL-205ENST00000415395 CLCN2P51788 898 aa11.66□□□□□ -0.54
RFFL-205ENST00000415395 RPS24P62847 133 aaKnown RBP11.66□□□□□ -0.54
RFFL-205ENST00000415395 ASPHQ12797 758 aa11.66□□□□□ -0.54
RFFL-205ENST00000415395 MPP3Q13368 585 aa11.66□□□□□ -0.54
RFFL-205ENST00000415395 BMPR2Q13873 1038 aa11.66□□□□□ -0.54
RFFL-205ENST00000415395 SLC14A2Q15849 920 aa11.66□□□□□ -0.54
RFFL-205ENST00000415395 CCDC153Q494R4 210 aa11.66□□□□□ -0.54
RFFL-205ENST00000415395 MROH9Q5TGP6 573 aa11.66□□□□□ -0.54
RFFL-205ENST00000415395 SPRED2Q7Z698 418 aa11.66□□□□□ -0.54
RFFL-205ENST00000415395 ZNF354CQ86Y25 554 aa11.66□□□□□ -0.54
RFFL-205ENST00000415395 TREML1Q86YW5 311 aa11.66□□□□□ -0.54
RFFL-205ENST00000415395 CFAP52Q8N1V2 620 aa11.66□□□□□ -0.54
RFFL-205ENST00000415395 KIAA1958Q8N8K9 716 aa11.66□□□□□ -0.54
RFFL-205ENST00000415395 USP33Q8TEY7 942 aa11.66□□□□□ -0.54
RFFL-205ENST00000415395 WBP2Q969T9 261 aa11.66□□□□□ -0.54
RFFL-205ENST00000415395 DTNBP1Q96EV8 351 aa11.66□□□□□ -0.54
RFFL-205ENST00000415395 CDCA3Q99618 268 aaPredicted RBP11.66□□□□□ -0.54
RFFL-205ENST00000415395 MECRQ9BV79 373 aa11.66□□□□□ -0.54
RFFL-205ENST00000415395 SLC46A2Q9BY10 475 aa11.66□□□□□ -0.54
RFFL-205ENST00000415395 PDFQ9HBH1 243 aa11.66□□□□□ -0.54
RFFL-205ENST00000415395 MOCS1Q9NZB8 636 aa11.66□□□□□ -0.54
RFFL-205ENST00000415395 BFARQ9NZS9 450 aa11.66□□□□□ -0.54
RFFL-205ENST00000415395 NDUFA13Q9P0J0 144 aa11.66□□□□□ -0.54
RFFL-205ENST00000415395 DNMT3BQ9UBC3 853 aaKnown RBP11.66□□□□□ -0.54
RFFL-205ENST00000415395 SLC7A8Q9UHI5 535 aa11.66□□□□□ -0.54
RFFL-205ENST00000415395 HCFC2Q9Y5Z7 792 aa11.66□□□□□ -0.54
RFFL-205ENST00000415395 MAGEB16A2A368 324 aa11.66□□□□□ -0.54
RFFL-205ENST00000415395 PRR5-ARHGAP8B1AHC4 643 aa11.66□□□□□ -0.54
RFFL-205ENST00000415395 J3KR12 359 aa11.66□□□□□ -0.54
RFFL-205ENST00000415395 LEFTY2O00292 366 aa11.66□□□□□ -0.54
RFFL-205ENST00000415395 KDELR3O43731 214 aa11.66□□□□□ -0.54
RFFL-205ENST00000415395 RFPL2O75678 378 aa11.66□□□□□ -0.54
RFFL-205ENST00000415395 BAG2O95816 211 aa11.66□□□□□ -0.54
RFFL-205ENST00000415395 KITP10721 976 aa11.66□□□□□ -0.54
RFFL-205ENST00000415395 HOXD9P28356 352 aaPredicted RBP11.66□□□□□ -0.54
RFFL-205ENST00000415395 ACVRL1P37023 503 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms