RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 USP12O75317 370 aa13.37□□□□□ -0.27
CNN3-203ENST00000415017 ADH1BP00325 375 aa13.37□□□□□ -0.27
CNN3-203ENST00000415017 PDGFBP01127 241 aaPredicted RBP13.37□□□□□ -0.27
CNN3-203ENST00000415017 IGLV3-19P01714 112 aa13.37□□□□□ -0.27
CNN3-203ENST00000415017 MYBL2P10244 700 aa13.37□□□□□ -0.27
CNN3-203ENST00000415017 TIMP2P16035 220 aa13.37□□□□□ -0.27
CNN3-203ENST00000415017 C5AR1P21730 350 aa13.37□□□□□ -0.27
CNN3-203ENST00000415017 CHRNA4P43681 627 aa13.37□□□□□ -0.27
CNN3-203ENST00000415017 NPY2RP49146 381 aa13.37□□□□□ -0.27
CNN3-203ENST00000415017 SUOXP51687 545 aa13.37□□□□□ -0.27
CNN3-203ENST00000415017 DGKEP52429 567 aa13.37□□□□□ -0.27
CNN3-203ENST00000415017 METAP1P53582 386 aa13.37□□□□□ -0.27
CNN3-203ENST00000415017 PLTPP55058 493 aa13.37□□□□□ -0.27
CNN3-203ENST00000415017 VSNL1P62760 191 aa13.37□□□□□ -0.27
CNN3-203ENST00000415017 CDH17Q12864 832 aa13.37□□□□□ -0.27
CNN3-203ENST00000415017 STARD3Q14849 445 aa13.37□□□□□ -0.27
CNN3-203ENST00000415017 CST6Q15828 149 aa13.37□□□□□ -0.27
CNN3-203ENST00000415017 UGP2Q16851 508 aa13.37□□□□□ -0.27
CNN3-203ENST00000415017 MSS51Q4VC12 460 aa13.37□□□□□ -0.27
CNN3-203ENST00000415017 FNBP1LQ5T0N5 605 aa13.37□□□□□ -0.27
CNN3-203ENST00000415017 ZNF776Q68DI1 518 aaPredicted RBP13.37□□□□□ -0.27
CNN3-203ENST00000415017 PPP1R21Q6ZMI0 780 aa13.37□□□□□ -0.27
CNN3-203ENST00000415017 RASSF3Q86WH2 238 aa13.37□□□□□ -0.27
CNN3-203ENST00000415017 RYBPQ8N488 228 aaPredicted RBP13.37□□□□□ -0.27
CNN3-203ENST00000415017 OR52K1Q8NGK4 314 aa13.37□□□□□ -0.27
CNN3-203ENST00000415017 SCRN2Q96FV2 425 aa13.37□□□□□ -0.27
CNN3-203ENST00000415017 MRGPRX1Q96LB2 322 aa13.37□□□□□ -0.27
CNN3-203ENST00000415017 RANBP9Q96S59 729 aa13.37□□□□□ -0.27
CNN3-203ENST00000415017 FICDQ9BVA6 458 aa13.37□□□□□ -0.27
CNN3-203ENST00000415017 ADGRE3Q9BY15 652 aa13.37□□□□□ -0.27
CNN3-203ENST00000415017 PARD6BQ9BYG5 372 aa13.37□□□□□ -0.27
CNN3-203ENST00000415017 TXLNGYQ9BZA5 131 aa13.37□□□□□ -0.27
CNN3-203ENST00000415017 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.37□□□□□ -0.27
CNN3-203ENST00000415017 V9GYY5 206 aaPredicted RBP13.37□□□□□ -0.27
CNN3-203ENST00000415017 PLXNA2O75051 1894 aa13.37□□□□□ -0.27
CNN3-203ENST00000415017 KMT2EQ8IZD2 1858 aa13.36□□□□□ -0.27
CNN3-203ENST00000415017 ZDBF2Q9HCK1 2354 aa13.36□□□□□ -0.27
CNN3-203ENST00000415017 TMEM221A6NGB7 291 aa13.36□□□□□ -0.27
CNN3-203ENST00000415017 M0R296 226 aa13.36□□□□□ -0.27
CNN3-203ENST00000415017 EIF3HO15372 352 aaKnown RBP eCLIP13.36□□□□□ -0.27
CNN3-203ENST00000415017 PI15O43692 258 aa13.36□□□□□ -0.27
CNN3-203ENST00000415017 BNIP3LO60238 219 aa13.36□□□□□ -0.27
CNN3-203ENST00000415017 GABRG2P18507 467 aa13.36□□□□□ -0.27
CNN3-203ENST00000415017 HOXA6P31267 233 aa13.36□□□□□ -0.27
CNN3-203ENST00000415017 SLC8A1P32418 973 aa13.36□□□□□ -0.27
CNN3-203ENST00000415017 POLR2LP62875 67 aaKnown RBP13.36□□□□□ -0.27
CNN3-203ENST00000415017 SARNPP82979 210 aaKnown RBP13.36□□□□□ -0.27
CNN3-203ENST00000415017 PCSK7Q16549 785 aa13.36□□□□□ -0.27
CNN3-203ENST00000415017 SYCP2LQ5T4T6 812 aa13.36□□□□□ -0.27
CNN3-203ENST00000415017 PIP5KL1Q5T9C9 394 aa13.36□□□□□ -0.27
CNN3-203ENST00000415017 FAM46CQ5VWP2 391 aa13.36□□□□□ -0.27
CNN3-203ENST00000415017 PARS2Q7L3T8 475 aaKnown RBP13.36□□□□□ -0.27
CNN3-203ENST00000415017 TMPRSS6Q8IU80 811 aa13.36□□□□□ -0.27
CNN3-203ENST00000415017 MMAAQ8IVH4 418 aaKnown RBP13.36□□□□□ -0.27
CNN3-203ENST00000415017 AADATQ8N5Z0 425 aa13.36□□□□□ -0.27
CNN3-203ENST00000415017 GRIN3AQ8TCU5 1115 aa13.36□□□□□ -0.27
CNN3-203ENST00000415017 LRRC39Q96DD0 335 aa13.36□□□□□ -0.27
CNN3-203ENST00000415017 IFT43Q96FT9 208 aa13.36□□□□□ -0.27
CNN3-203ENST00000415017 WDR83Q9BRX9 315 aaKnown RBP13.36□□□□□ -0.27
CNN3-203ENST00000415017 FSD1LQ9BXM9 530 aa13.36□□□□□ -0.27
CNN3-203ENST00000415017 PABPC3Q9H361 631 aaKnown RBP13.36□□□□□ -0.27
CNN3-203ENST00000415017 MAGEE1Q9HCI5 957 aa13.36□□□□□ -0.27
CNN3-203ENST00000415017 POLR3BQ9NW08 1133 aaPredicted RBP13.36□□□□□ -0.27
CNN3-203ENST00000415017 RIMKLBQ9ULI2 386 aa13.36□□□□□ -0.27
CNN3-203ENST00000415017 NFU1Q9UMS0 254 aa13.36□□□□□ -0.27
CNN3-203ENST00000415017 TEX264Q9Y6I9 313 aa13.36□□□□□ -0.27
CNN3-203ENST00000415017 DOCK9Q9BZ29 2069 aa13.36□□□□□ -0.27
CNN3-203ENST00000415017 NUMA1Q14980 2115 aa13.36□□□□□ -0.27
CNN3-203ENST00000415017 MROH6A6NGR9 719 aa13.35□□□□□ -0.27
CNN3-203ENST00000415017 CAPN8A6NHC0 703 aa13.35□□□□□ -0.27
CNN3-203ENST00000415017 UPK3BL1B0FP48 263 aa13.35□□□□□ -0.27
CNN3-203ENST00000415017 UPK3BL2E5RIL1 263 aa13.35□□□□□ -0.27
CNN3-203ENST00000415017 C1QTNF3-AMACRE9PGA6 284 aa13.35□□□□□ -0.27
CNN3-203ENST00000415017 AP1G1O43747 822 aa13.35□□□□□ -0.27
CNN3-203ENST00000415017 RNASEH1O60930 286 aaKnown RBP13.35□□□□□ -0.27
CNN3-203ENST00000415017 AVILO75366 819 aa13.35□□□□□ -0.27
CNN3-203ENST00000415017 CPP00450 1065 aa13.35□□□□□ -0.27
CNN3-203ENST00000415017 IL1BP01584 269 aa13.35□□□□□ -0.27
CNN3-203ENST00000415017 NDUFV2P19404 249 aa13.35□□□□□ -0.27
CNN3-203ENST00000415017 TERF1P54274 439 aa13.35□□□□□ -0.27
CNN3-203ENST00000415017 TAS2R38P59533 333 aa13.35□□□□□ -0.27
CNN3-203ENST00000415017 MTAPQ13126 283 aa13.35□□□□□ -0.27
CNN3-203ENST00000415017 CERCAMQ5T4B2 595 aa13.35□□□□□ -0.27
CNN3-203ENST00000415017 AGBL4Q5VU57 503 aa13.35□□□□□ -0.27
CNN3-203ENST00000415017 USP30Q70CQ3 517 aa13.35□□□□□ -0.27
CNN3-203ENST00000415017 ERN2Q76MJ5 926 aaKnown RBP13.35□□□□□ -0.27
CNN3-203ENST00000415017 RAVER1Q8IY67 606 aaKnown RBP13.35□□□□□ -0.27
CNN3-203ENST00000415017 TTC30BQ8N4P2 665 aa13.35□□□□□ -0.27
CNN3-203ENST00000415017 CAMKK1Q8N5S9 505 aa13.35□□□□□ -0.27
CNN3-203ENST00000415017 RAB7BQ96AH8 199 aa13.35□□□□□ -0.27
CNN3-203ENST00000415017 PPP1R16AQ96I34 528 aa13.35□□□□□ -0.27
CNN3-203ENST00000415017 PWWP2AQ96N64 755 aa13.35□□□□□ -0.27
CNN3-203ENST00000415017 SRPK1Q96SB4 655 aaKnown RBP13.35□□□□□ -0.27
CNN3-203ENST00000415017 APOL2Q9BQE5 337 aa13.35□□□□□ -0.27
CNN3-203ENST00000415017 IL22Q9GZX6 179 aa13.35□□□□□ -0.27
CNN3-203ENST00000415017 PLAC1Q9HBJ0 212 aa13.35□□□□□ -0.27
CNN3-203ENST00000415017 POLMQ9NP87 494 aaPredicted RBP13.35□□□□□ -0.27
CNN3-203ENST00000415017 ITM2CQ9NQX7 267 aa13.35□□□□□ -0.27
CNN3-203ENST00000415017 HACD3Q9P035 362 aa13.35□□□□□ -0.27
CNN3-203ENST00000415017 USP36Q9P275 1121 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms