RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 TMEM9BQ9NQ34 198 aa14.74□□□□□ -0.05
LIMS1-206ENST00000414829 CDV3Q9UKY7 258 aaKnown RBP14.74□□□□□ -0.05
LIMS1-206ENST00000414829 ZKSCAN5Q9Y2L8 839 aa14.74□□□□□ -0.05
LIMS1-206ENST00000414829 PCDHB9Q9Y5E1 797 aa14.74□□□□□ -0.05
LIMS1-206ENST00000414829 PCDHGC4Q9Y5F7 938 aa14.74□□□□□ -0.05
LIMS1-206ENST00000414829 FAM186AA6NE01 2351 aa14.74□□□□□ -0.05
LIMS1-206ENST00000414829 NYNRINQ9P2P1 1898 aaKnown RBP14.74□□□□□ -0.05
LIMS1-206ENST00000414829 RIF1Q5UIP0 2472 aaKnown RBP14.73□□□□□ -0.05
LIMS1-206ENST00000414829 SPAG17Q6Q759 2223 aa14.73□□□□□ -0.05
LIMS1-206ENST00000414829 EML5Q05BV3 1969 aa14.73□□□□□ -0.05
LIMS1-206ENST00000414829 GOLGA6CA6NDK9 693 aa14.73□□□□□ -0.05
LIMS1-206ENST00000414829 GOLGA6BA6NDN3 693 aa14.73□□□□□ -0.05
LIMS1-206ENST00000414829 A6NNZ2 444 aa14.73□□□□□ -0.05
LIMS1-206ENST00000414829 PSMD11O00231 422 aa14.73□□□□□ -0.05
LIMS1-206ENST00000414829 RIOK3O14730 519 aaKnown RBP14.73□□□□□ -0.05
LIMS1-206ENST00000414829 YKT6O15498 198 aa14.73□□□□□ -0.05
LIMS1-206ENST00000414829 OPHN1O60890 802 aa14.73□□□□□ -0.05
LIMS1-206ENST00000414829 ELFN1P0C7U0 828 aa14.73□□□□□ -0.05
LIMS1-206ENST00000414829 GOLGA6DP0CG33 693 aa14.73□□□□□ -0.05
LIMS1-206ENST00000414829 ENGP17813 658 aa14.73□□□□□ -0.05
LIMS1-206ENST00000414829 PTPN3P26045 913 aa14.73□□□□□ -0.05
LIMS1-206ENST00000414829 MAOBP27338 520 aa14.73□□□□□ -0.05
LIMS1-206ENST00000414829 CD38P28907 300 aa14.73□□□□□ -0.05
LIMS1-206ENST00000414829 ADCY2Q08462 1091 aa14.73□□□□□ -0.05
LIMS1-206ENST00000414829 TRAF2Q12933 501 aa14.73□□□□□ -0.05
LIMS1-206ENST00000414829 GRIK2Q13002 908 aa14.73□□□□□ -0.05
LIMS1-206ENST00000414829 KLF1Q13351 362 aaPredicted RBP14.73□□□□□ -0.05
LIMS1-206ENST00000414829 ARHGEF7Q14155 803 aa14.73□□□□□ -0.05
LIMS1-206ENST00000414829 SF3A2Q15428 464 aaKnown RBP14.73□□□□□ -0.05
LIMS1-206ENST00000414829 CCDC6Q16204 474 aa14.73□□□□□ -0.05
LIMS1-206ENST00000414829 CCDC70Q6NSX1 233 aa14.73□□□□□ -0.05
LIMS1-206ENST00000414829 DARS2Q6PI48 645 aaKnown RBP14.73□□□□□ -0.05
LIMS1-206ENST00000414829 DPPA4Q7L190 304 aa14.73□□□□□ -0.05
LIMS1-206ENST00000414829 DCP2Q8IU60 420 aaKnown RBP14.73□□□□□ -0.05
LIMS1-206ENST00000414829 TMEM145Q8NBT3 493 aa14.73□□□□□ -0.05
LIMS1-206ENST00000414829 ARRDC2Q8TBH0 407 aa14.73□□□□□ -0.05
LIMS1-206ENST00000414829 IMP4Q96G21 291 aaKnown RBP14.73□□□□□ -0.05
LIMS1-206ENST00000414829 SLC6A18Q96N87 628 aa14.73□□□□□ -0.05
LIMS1-206ENST00000414829 NAP1L3Q99457 506 aaPredicted RBP14.73□□□□□ -0.05
LIMS1-206ENST00000414829 ORAI3Q9BRQ5 295 aa14.73□□□□□ -0.05
LIMS1-206ENST00000414829 C1QTNF2Q9BXJ5 285 aa14.73□□□□□ -0.05
LIMS1-206ENST00000414829 GLOD4Q9HC38 313 aa14.73□□□□□ -0.05
LIMS1-206ENST00000414829 GDF3Q9NR23 364 aa14.73□□□□□ -0.05
LIMS1-206ENST00000414829 HOMER3Q9NSC5 361 aa14.73□□□□□ -0.05
LIMS1-206ENST00000414829 GOLGA6AQ9NYA3 693 aa14.73□□□□□ -0.05
LIMS1-206ENST00000414829 EP300Q09472 2414 aaPredicted RBP14.72□□□□□ -0.05
LIMS1-206ENST00000414829 GVINP1Q7Z2Y8 2422 aa14.72□□□□□ -0.05
LIMS1-206ENST00000414829 FPGTO14772 594 aa14.72□□□□□ -0.05
LIMS1-206ENST00000414829 SLC31A1O15431 190 aa14.72□□□□□ -0.05
LIMS1-206ENST00000414829 ANXA9O76027 345 aa14.72□□□□□ -0.05
LIMS1-206ENST00000414829 ZNF30P17039 623 aa14.72□□□□□ -0.05
LIMS1-206ENST00000414829 VIPR1P32241 457 aa14.72□□□□□ -0.05
LIMS1-206ENST00000414829 CD86P42081 329 aa14.72□□□□□ -0.05
LIMS1-206ENST00000414829 FAM193AP78312 1265 aa14.72□□□□□ -0.05
LIMS1-206ENST00000414829 IRX4P78413 519 aa14.72□□□□□ -0.05
LIMS1-206ENST00000414829 PRPSAP1Q14558 356 aa14.72□□□□□ -0.05
LIMS1-206ENST00000414829 SEL1L3Q68CR1 1132 aa14.72□□□□□ -0.05
LIMS1-206ENST00000414829 KYAT3Q6YP21 454 aaKnown RBP14.72□□□□□ -0.05
LIMS1-206ENST00000414829 PID1Q7Z2X4 250 aa14.72□□□□□ -0.05
LIMS1-206ENST00000414829 SLC13A5Q86YT5 568 aaPredicted RBP14.72□□□□□ -0.05
LIMS1-206ENST00000414829 RAVER1Q8IY67 606 aaKnown RBP14.72□□□□□ -0.05
LIMS1-206ENST00000414829 CNTD1Q8N815 330 aa14.72□□□□□ -0.05
LIMS1-206ENST00000414829 IFT43Q96FT9 208 aa14.72□□□□□ -0.05
LIMS1-206ENST00000414829 SCRN2Q96FV2 425 aa14.72□□□□□ -0.05
LIMS1-206ENST00000414829 MCCC1Q96RQ3 725 aaPredicted RBP14.72□□□□□ -0.05
LIMS1-206ENST00000414829 GBA3Q9H227 469 aa14.72□□□□□ -0.05
LIMS1-206ENST00000414829 PCDH9Q9HC56 1237 aa14.72□□□□□ -0.05
LIMS1-206ENST00000414829 FAM153AQ9UHL3 310 aa14.72□□□□□ -0.05
LIMS1-206ENST00000414829 RSPH14Q9UHP6 348 aa14.72□□□□□ -0.05
LIMS1-206ENST00000414829 ZFR2Q9UPR6 939 aaKnown RBP14.72□□□□□ -0.05
LIMS1-206ENST00000414829 ITM2BQ9Y287 266 aa14.72□□□□□ -0.05
LIMS1-206ENST00000414829 PPIL1Q9Y3C6 166 aa14.72□□□□□ -0.05
LIMS1-206ENST00000414829 HS3ST3A1Q9Y663 406 aa14.72□□□□□ -0.05
LIMS1-206ENST00000414829 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.72□□□□□ -0.05
LIMS1-206ENST00000414829 IGLON5A6NGN9 336 aa14.71□□□□□ -0.05
LIMS1-206ENST00000414829 CAPN8A6NHC0 703 aa14.71□□□□□ -0.05
LIMS1-206ENST00000414829 PATE3B3GLJ2 98 aa14.71□□□□□ -0.05
LIMS1-206ENST00000414829 KCNN4O15554 427 aa14.71□□□□□ -0.05
LIMS1-206ENST00000414829 SPINT1O43278 529 aa14.71□□□□□ -0.05
LIMS1-206ENST00000414829 LZTS3O60299 673 aaPredicted RBP14.71□□□□□ -0.05
LIMS1-206ENST00000414829 FZD6O60353 706 aa14.71□□□□□ -0.05
LIMS1-206ENST00000414829 C6P13671 934 aa14.71□□□□□ -0.05
LIMS1-206ENST00000414829 PRLRP16471 622 aa14.71□□□□□ -0.05
LIMS1-206ENST00000414829 ACTN2P35609 894 aa14.71□□□□□ -0.05
LIMS1-206ENST00000414829 RABIFP47224 123 aa14.71□□□□□ -0.05
LIMS1-206ENST00000414829 SKOR1P84550 965 aa14.71□□□□□ -0.05
LIMS1-206ENST00000414829 WASHC5Q12768 1159 aa14.71□□□□□ -0.05
LIMS1-206ENST00000414829 SLC14A1Q13336 389 aa14.71□□□□□ -0.05
LIMS1-206ENST00000414829 AGERQ15109 404 aa14.71□□□□□ -0.05
LIMS1-206ENST00000414829 P3H1Q32P28 736 aa14.71□□□□□ -0.05
LIMS1-206ENST00000414829 INAVAQ3KP66 663 aa14.71□□□□□ -0.05
LIMS1-206ENST00000414829 TCEAL6Q6IPX3 200 aa14.71□□□□□ -0.05
LIMS1-206ENST00000414829 TCEAL3Q969E4 200 aa14.71□□□□□ -0.05
LIMS1-206ENST00000414829 PBKQ96KB5 322 aa14.71□□□□□ -0.05
LIMS1-206ENST00000414829 SPATA13Q96N96 652 aa14.71□□□□□ -0.05
LIMS1-206ENST00000414829 FCRL5Q96RD9 977 aa14.71□□□□□ -0.05
LIMS1-206ENST00000414829 WRAP53Q9BUR4 548 aaKnown RBP14.71□□□□□ -0.05
LIMS1-206ENST00000414829 GTPBP2Q9BX10 602 aaKnown RBP14.71□□□□□ -0.05
LIMS1-206ENST00000414829 FSD1LQ9BXM9 530 aa14.71□□□□□ -0.05
LIMS1-206ENST00000414829 TLR10Q9BXR5 811 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms